BLASTX nr result

ID: Panax21_contig00009700 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00009700
         (1157 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285448.2| PREDICTED: putative clathrin assembly protei...   234   3e-59
ref|XP_002308057.1| predicted protein [Populus trichocarpa] gi|2...   219   1e-54
ref|XP_002531947.1| clathrin assembly protein, putative [Ricinus...   213   7e-53
emb|CAN83852.1| hypothetical protein VITISV_037564 [Vitis vinifera]   211   3e-52
ref|XP_003542645.1| PREDICTED: putative clathrin assembly protei...   206   9e-51

>ref|XP_002285448.2| PREDICTED: putative clathrin assembly protein At5g35200 isoform 1
            [Vitis vinifera] gi|359484230|ref|XP_003633084.1|
            PREDICTED: putative clathrin assembly protein At5g35200
            isoform 2 [Vitis vinifera]
          Length = 555

 Score =  234 bits (597), Expect = 3e-59
 Identities = 133/264 (50%), Positives = 152/264 (57%), Gaps = 16/264 (6%)
 Frame = -3

Query: 1155 EEYVREAPRASTFRKDLA--------LDAPKVILAIEYEKAXXXXXXXXXXXXXXXXXXX 1000
            EEYVR+APRAST RKD          L APKV+L+IEY KA                   
Sbjct: 296  EEYVRDAPRASTVRKDQETKQVVSEKLAAPKVVLSIEYNKAPEVQEEHPPSPPPPEPVKV 355

Query: 999  XXXXXXXXXXXPDLLGLNDPVPEASALDEKNALALAIVPVDDQPTASGPDLVNGATGWEL 820
                        DLLGL+DP+P  + LDEKNA+ALAIVPV + P ++GP+  NG TGWEL
Sbjct: 356  EMPVVEPP----DLLGLDDPIPNTAELDEKNAMALAIVPVAETPPSAGPNPANGTTGWEL 411

Query: 819  ALVTXXXXXXXXXXXXXXAGGLDKLTLDSLYDDAIRRSNQNVSYNPWEQAPMANPMMQQT 640
            ALVT              AGGLD LTLDSLYDDAIRR+NQNVSYNPW+  PM  PMMQQT
Sbjct: 412  ALVTAPSSNENATAASKLAGGLDMLTLDSLYDDAIRRNNQNVSYNPWQPVPMGGPMMQQT 471

Query: 639  AYDPFYASNAVAPPPTVQMAAMXXXXXXXXXXXXXXXXXXXXXXXXXXF--------GNP 484
            A+DPF+ASNAVA PP VQMAAM                                   GNP
Sbjct: 472  AHDPFFASNAVAAPPNVQMAAMGNQQQAFMLQQQQQQQQQQMMMMMGQQQQQPLNPFGNP 531

Query: 483  YGSSAHPYGSGMPVQAYNPYRGLM 412
            YG++AHPYGSGMPVQ +NPY G +
Sbjct: 532  YGATAHPYGSGMPVQTHNPYSGFI 555


>ref|XP_002308057.1| predicted protein [Populus trichocarpa] gi|222854033|gb|EEE91580.1|
            predicted protein [Populus trichocarpa]
          Length = 548

 Score =  219 bits (557), Expect = 1e-54
 Identities = 135/258 (52%), Positives = 146/258 (56%), Gaps = 10/258 (3%)
 Frame = -3

Query: 1155 EEYVREAPRASTFRKDLALD----APKVILAIEYEKAXXXXXXXXXXXXXXXXXXXXXXX 988
            EEYVR+APR S  RKD  +D    APK ILAIEY+K                        
Sbjct: 295  EEYVRDAPRMSIARKDQFVDNKIAAPKEILAIEYKKEPGVEEECPPSPPPPEPVKVEEPV 354

Query: 987  XXXXXXXPDLLGLNDPVPEASALDEKNALALAIVPVDDQPTASGPDLVNGATGWELALVT 808
                    DLLGL DP+P AS LDEKNALALAIVPV +Q + + P   NG TGWELALVT
Sbjct: 355  AQPP----DLLGLGDPLPVASELDEKNALALAIVPVAEQQSTAIPSHANGTTGWELALVT 410

Query: 807  XXXXXXXXXXXXXXAGGLDKLTLDSLYDDAIRRSNQNVSYNPWEQAPMANPMMQQTAYDP 628
                          AGGLDKLTLDSLYDDAIRRSNQ VSYNPWE APMANPMMQ   +DP
Sbjct: 411  APSSNESAAAASKLAGGLDKLTLDSLYDDAIRRSNQPVSYNPWEPAPMANPMMQTAVHDP 470

Query: 627  FYASNAVAPPPTVQMAAM-----XXXXXXXXXXXXXXXXXXXXXXXXXXFGNPYGSSAHP 463
            F+ASN VA P +VQMA M                               F NPYGSS HP
Sbjct: 471  FFASNMVAAPHSVQMAQMASQQQAFMLQQQQQQQQMMMMMGQQQQPSNPFDNPYGSSVHP 530

Query: 462  YGSGM-PVQAYNPYRGLM 412
            YGSG  PVQAYNPY GL+
Sbjct: 531  YGSGRPPVQAYNPYSGLI 548


>ref|XP_002531947.1| clathrin assembly protein, putative [Ricinus communis]
            gi|223528393|gb|EEF30429.1| clathrin assembly protein,
            putative [Ricinus communis]
          Length = 548

 Score =  213 bits (542), Expect = 7e-53
 Identities = 133/258 (51%), Positives = 146/258 (56%), Gaps = 10/258 (3%)
 Frame = -3

Query: 1155 EEYVREAPRASTFRKDLA---LDAPKVILAIEYEKAXXXXXXXXXXXXXXXXXXXXXXXX 985
            EEYVREAPR S  ++ +    + APK +LAIEY+K                         
Sbjct: 296  EEYVREAPRMSVRKEQVVENKITAPKEVLAIEYKKEPEVKEEHPPSPPPPEPVKVEVPVV 355

Query: 984  XXXXXXPDLLGLNDPVPEASALDEKNALALAIVPVDDQPTASGPDLVNGATGWELALVTX 805
                   DLLGL+DPVP AS LDEKNALALAIVPV DQP+ + P   NG TGWELALVT 
Sbjct: 356  EPP----DLLGLDDPVPVASQLDEKNALALAIVPVTDQPSTTFPSQANGTTGWELALVTA 411

Query: 804  XXXXXXXXXXXXXAGGLDKLTLDSLYDDAIRRSNQNVSYNPWEQAPMANPMMQQTAYDPF 625
                         AGGLDKLTLDSLYDDAIRRSNQ VSYNPWE APM N  M QTA+DPF
Sbjct: 412  PSSNESAAAASKLAGGLDKLTLDSLYDDAIRRSNQPVSYNPWEPAPM-NAPMTQTAHDPF 470

Query: 624  YASNAVAPPPTVQMAAM----XXXXXXXXXXXXXXXXXXXXXXXXXXFGNPYGSSAHPYG 457
            +ASNAVA P +VQMAAM                              F NPYG+  H YG
Sbjct: 471  FASNAVAAPHSVQMAAMANQQQAFMLQQQQQQQMMMMMGPQQQPSNPFANPYGAGVHTYG 530

Query: 456  SGM---PVQAYNPYRGLM 412
            SGM   PVQAYNPY  LM
Sbjct: 531  SGMPMPPVQAYNPYSSLM 548


>emb|CAN83852.1| hypothetical protein VITISV_037564 [Vitis vinifera]
          Length = 588

 Score =  211 bits (537), Expect = 3e-52
 Identities = 124/250 (49%), Positives = 141/250 (56%), Gaps = 17/250 (6%)
 Frame = -3

Query: 1155 EEYVREAPRASTFRKDLA--------LDAPKVILAIEYEKAXXXXXXXXXXXXXXXXXXX 1000
            EEYVR+APRAST RKD          L APKV+L+IEY KA                   
Sbjct: 290  EEYVRDAPRASTVRKDQETKQVVSEKLAAPKVVLSIEYNKAPEVQEEHPPSPPPPEPVKV 349

Query: 999  XXXXXXXXXXXPDLLGLNDPVPEASALDEKNALALAIVPVDDQPTASGPDLVNGATGWEL 820
                        DLLGL+DP+P  + LDEKNA+ALAIVPV + P ++GP+  NG TGWEL
Sbjct: 350  EMPVVEPP----DLLGLDDPIPNTAELDEKNAMALAIVPVAETPPSAGPNPANGTTGWEL 405

Query: 819  ALVTXXXXXXXXXXXXXXAGGLDKLTLDSLYDDAIRRSNQNVSYNPWEQAPMANPMMQQT 640
            ALVT              AGGLD LTLDSLYDDAIRR+NQNVSYNPW+  PM  PMMQQT
Sbjct: 406  ALVTAPSSNENATAASKLAGGLDMLTLDSLYDDAIRRNNQNVSYNPWQPVPMGGPMMQQT 465

Query: 639  AYDPFYASNAVAPPPTVQMAAM---------XXXXXXXXXXXXXXXXXXXXXXXXXXFGN 487
            A+DPF+ASNAVA PP VQMAAM                                   FGN
Sbjct: 466  AHDPFFASNAVAAPPNVQMAAMGNQQQAFMLQQQQQQQQQQQMMMMMGQQQQQPLNPFGN 525

Query: 486  PYGSSAHPYG 457
            PYG++AHPYG
Sbjct: 526  PYGATAHPYG 535


>ref|XP_003542645.1| PREDICTED: putative clathrin assembly protein At5g35200-like [Glycine
            max]
          Length = 546

 Score =  206 bits (524), Expect = 9e-51
 Identities = 126/255 (49%), Positives = 148/255 (58%), Gaps = 7/255 (2%)
 Frame = -3

Query: 1155 EEYVREAPRASTFRKDLALDAPKVILAIEYEKAXXXXXXXXXXXXXXXXXXXXXXXXXXX 976
            EEYV++AP+    RKD A++  K +LAIEY+K                            
Sbjct: 295  EEYVKDAPQGPIVRKDQAIEN-KEVLAIEYKKTTEVEEECPPSPSPSPPPPPPSEPVKVE 353

Query: 975  XXXP----DLLGLNDPVPEASALDEKNALALAIVPV--DDQPTASGPDLVNGATGWELAL 814
                    DLL L DPVP A+ L+EKNALALAIVPV  + QP+A   +  NG TGWELAL
Sbjct: 354  APPVQPPPDLLNLEDPVPAAAELEEKNALALAIVPVAVEQQPSAVS-NQANGTTGWELAL 412

Query: 813  VTXXXXXXXXXXXXXXAGGLDKLTLDSLYDDAIRRSNQNVSYNPWEQAPMANPMMQQTAY 634
            VT              AGGLDKLTLDSLYDDA+RR+NQNVSYNPWE AP  N MMQ T +
Sbjct: 413  VTAPSSNESATTASKLAGGLDKLTLDSLYDDALRRNNQNVSYNPWEPAPGGN-MMQPTMH 471

Query: 633  DPFYASNAVAPPPTVQMAAMXXXXXXXXXXXXXXXXXXXXXXXXXXFGNPYGSSA-HPYG 457
            DPF+ASN VA PP+VQMA+M                          FGNPYG++A HPYG
Sbjct: 472  DPFFASNTVAAPPSVQMASMSNQQQAFMYQQQQQMMMAPQQQSVNPFGNPYGATAVHPYG 531

Query: 456  SGMPVQAYNPYRGLM 412
            SGMPVQ+YNPY GL+
Sbjct: 532  SGMPVQSYNPYTGLI 546


Top