BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00009680
         (1198 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13834.1| putative PIF1 DNA helicase/replication protein A1...    87   6e-15
ref|XP_003626023.1| Replication factor A protein [Medicago trunc...    57   7e-06

>gb|AFK13834.1| putative PIF1 DNA helicase/replication protein A1-like protein
           [Beta vulgaris subsp. vulgaris]
          Length = 2037

 Score = 87.4 bits (215), Expect = 6e-15
 Identities = 48/131 (36%), Positives = 72/131 (54%)
 Frame = +2

Query: 2   RFKV*VKVMDDTSSASFVLFDREAQHVIGKSA*ELREQLIKVILKNSKNXXXXXXXXXXX 181
           RFK+ V+V+D + SASFV+FDRE + ++ KSA ++   L  +I                 
Sbjct: 318 RFKIQVRVVDGSGSASFVMFDREVKSIVHKSASDVNVSLTNII----------------- 360

Query: 182 IHVF*MR*DGDFDCFSDELNILLQKRFLFKIQISSYNLKANYETYTVARMTNDEKIIESY 361
                     D + + +ELN L+ +RFLFK+++S YNL  N+  YTV +MT++E IIES+
Sbjct: 361 ----------DSETYPEELNALVNRRFLFKVEVSEYNLTQNWPVYTVVKMTDNENIIESF 410

Query: 362 TNICDEPQVIS 394
            N     Q  S
Sbjct: 411 LNSSTGDQFFS 421


>ref|XP_003626023.1| Replication factor A protein [Medicago truncatula]
           gi|355501038|gb|AES82241.1| Replication factor A protein
           [Medicago truncatula]
          Length = 526

 Score = 57.4 bits (137), Expect = 7e-06
 Identities = 36/121 (29%), Positives = 60/121 (49%)
 Frame = +2

Query: 2   RFKV*VKVMDDTSSASFVLFDREAQHVIGKSA*ELREQLIKVILKNSKNXXXXXXXXXXX 181
           RFK+ V+VMD+T S SF+LFDR   + +GKS  +L +   +    N K            
Sbjct: 337 RFKLHVQVMDNTGSTSFILFDRNVSNYVGKSVQDLIDSQGQG--NNDKG----------- 383

Query: 182 IHVF*MR*DGDFDCFSDELNILLQKRFLFKIQISSYNLKANYETYTVARMTNDEKIIESY 361
                         +  +L++L+ K+ LFK++I+  NL  ++  Y V R T+D  +I  +
Sbjct: 384 --------------YPSDLDVLVGKKMLFKVEITDGNLHLSWRNYGVKRTTDDPDLISQF 429

Query: 362 T 364
           +
Sbjct: 430 S 430