BLASTX nr result

ID: Panax21_contig00009621 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00009621
         (1028 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284867.1| PREDICTED: UBX domain-containing protein 6 [...   197   3e-48
ref|XP_003630914.1| UBX domain-containing protein [Medicago trun...   192   1e-46
emb|CAN79664.1| hypothetical protein VITISV_031014 [Vitis vinifera]   191   3e-46
ref|XP_002525983.1| nucleic acid binding protein, putative [Rici...   188   2e-45
ref|XP_004162868.1| PREDICTED: UBX domain-containing protein 6-l...   187   3e-45

>ref|XP_002284867.1| PREDICTED: UBX domain-containing protein 6 [Vitis vinifera]
          Length = 474

 Score =  197 bits (502), Expect = 3e-48
 Identities = 128/324 (39%), Positives = 164/324 (50%), Gaps = 5/324 (1%)
 Frame = +2

Query: 71   NNPFSSSPSGKFKGQGRVLGXXXXXXXXXXXXXXXTPNRQPHNSENSKPLPQRRYDSDNQ 250
            N+PFSSS SGKFKGQGRVLG               + +  P N  +++P           
Sbjct: 16   NSPFSSSSSGKFKGQGRVLG---------------SSSSGPSNPIHTRP----------- 49

Query: 251  VQSNLSKLEPNAKPSNGFVASNSNNTKPLPQKINNSDIEVQGXXXXXXXXXXXXXXXXGF 430
                   L    KP    VA    N +PLPQ    SD                     GF
Sbjct: 50   ------SLPVETKPKPPSVAPP--NPRPLPQTTLASDQRKSNSDQNKSNFQHNSKPVDGF 101

Query: 431  DPFDSLITTGKRYKNGYSLDNMFECPVCGGGFGSEEEVAAHIENCLXXXXXXXXXXXXXX 610
            DPFDSL+T+GKR K+GYSL N+FECP+CG  F SEEE   H+++C+              
Sbjct: 102  DPFDSLVTSGKRSKHGYSL-NVFECPICGQSFTSEEETTIHVDSCVNSGVEHNDNQHSSE 160

Query: 611  XDQ-----SELEACVGAYVSGKPAEGSVSVLLKLLKNIVIEPENVKFRKIRMGNPKIKEA 775
                    +ELE  VG ++SGKP+EGSV V+LKLL+NI  EP N KFR+IRMGNPKI+EA
Sbjct: 161  LSNGDNGSTELEDRVGVFLSGKPSEGSVEVVLKLLRNIAKEPGNAKFRRIRMGNPKIREA 220

Query: 776  MVDVVXXXXXXXXXXXXXXXXXXXMWAVMGVPSSERIGVVKNVISFLEPPKLEDLSSPAP 955
            + +VV                   MWAVM   + + I ++   +S LEP K+E+ SSP  
Sbjct: 221  ISEVVGGVELLECVGFQLREEGGEMWAVMESATKDHIVLINMAVSLLEPQKMENSSSPVS 280

Query: 956  AIKDELVEQKQEPMEHKQIDRQIR 1027
            A   E      EP+E K++DRQIR
Sbjct: 281  AADVE------EPVELKKVDRQIR 298


>ref|XP_003630914.1| UBX domain-containing protein [Medicago truncatula]
            gi|355524936|gb|AET05390.1| UBX domain-containing protein
            [Medicago truncatula]
          Length = 463

 Score =  192 bits (487), Expect = 1e-46
 Identities = 120/331 (36%), Positives = 165/331 (49%), Gaps = 12/331 (3%)
 Frame = +2

Query: 71   NNPFSSSPSGKFKGQGRVLGXXXXXXXXXXXXXXXTPNRQPHNSENSKPLPQRRYDSDNQ 250
            NNPF+SS SGKFKGQGRVLG               TP  +P  S+N  P P+        
Sbjct: 16   NNPFTSSSSGKFKGQGRVLGSSSSSSTPANSIP--TPTHRPSPSQNPNPKPK----PTPP 69

Query: 251  VQSNLSKLEPNAKPSNGFVASNSNNTKPLPQKINNSDIEVQGXXXXXXXXXXXXXXXXGF 430
            + S+ SK++   KP++G                                          F
Sbjct: 70   IASDQSKIDKPRKPADG------------------------------------------F 87

Query: 431  DPFDSLITTGKRYKNGYSLDNMFECPVCGGGFGSEEEVAAHIENCLXXXXXXXXXXXXXX 610
            DPFDSL+T+ +R +NGYSL N++ECP+C   F SE+EV  H+E+CL              
Sbjct: 88   DPFDSLVTSSQRSQNGYSL-NVYECPICKQPFRSEDEVTEHVESCLSNPIENDDVDEKCV 146

Query: 611  X---------DQSELEACVGAYVSGKPAEGSVSVLLKLLKNIVIEPENVKFRKIRMGNPK 763
                        +ELE C+G YVSG P++GSV ++LKLL+NIV EP+NVKFRKIRMGNPK
Sbjct: 147  SKLKESQVSESNTELEICIGTYVSGNPSQGSVDIVLKLLRNIVKEPDNVKFRKIRMGNPK 206

Query: 764  IKEAMVDVVXXXXXXXXXXXXXXXXXXXMWAVMGVPSSERIGVVKNVISFLEPPKLEDL- 940
            IKEA+ +V+                    WA+M VP+ E++ ++K  I  LEP  ++D  
Sbjct: 207  IKEAIGEVIGGVELLSLLGFELKEENGETWALMEVPTEEKVNLIKKAIVLLEPQLVQDTP 266

Query: 941  --SSPAPAIKDELVEQKQEPMEHKQIDRQIR 1027
               +  P +  E V +     E K+IDRQ++
Sbjct: 267  KRENSTPTVSTEKVAE----AEPKKIDRQVK 293


>emb|CAN79664.1| hypothetical protein VITISV_031014 [Vitis vinifera]
          Length = 474

 Score =  191 bits (484), Expect = 3e-46
 Identities = 125/324 (38%), Positives = 161/324 (49%), Gaps = 5/324 (1%)
 Frame = +2

Query: 71   NNPFSSSPSGKFKGQGRVLGXXXXXXXXXXXXXXXTPNRQPHNSENSKPLPQRRYDSDNQ 250
            N PFSSS SGKF+GQGRVLG               + +  P N  +++P           
Sbjct: 16   NXPFSSSSSGKFQGQGRVLG---------------SSSSGPSNPIHTRP----------- 49

Query: 251  VQSNLSKLEPNAKPSNGFVASNSNNTKPLPQKINNSDIEVQGXXXXXXXXXXXXXXXXGF 430
                   L    KP    VA    N +PLPQ    SD                     GF
Sbjct: 50   ------SLPVETKPKPPSVAPP--NPRPLPQTTLASDQRKSNSDQNKSNFQHNSKPVDGF 101

Query: 431  DPFDSLITTGKRYKNGYSLDNMFECPVCGGGFGSEEEVAAHIENCLXXXXXXXXXXXXXX 610
            DPFDSL+T+GKR K+GYSL N+FECP+CG  F SEEE   H+++C+              
Sbjct: 102  DPFDSLVTSGKRSKHGYSL-NVFECPICGQSFTSEEETTIHVDSCVNSGVEHNDNQHSSE 160

Query: 611  XDQ-----SELEACVGAYVSGKPAEGSVSVLLKLLKNIVIEPENVKFRKIRMGNPKIKEA 775
                    +ELE  VG ++SGKP+EGSV V+LKLL+NI  EP N KFR+IRMGNPKI+EA
Sbjct: 161  LSNGDNGSTELEDRVGVFLSGKPSEGSVEVVLKLLRNIAKEPGNAKFRRIRMGNPKIREA 220

Query: 776  MVDVVXXXXXXXXXXXXXXXXXXXMWAVMGVPSSERIGVVKNVISFLEPPKLEDLSSPAP 955
            + +VV                   MWAVM   + + I ++   +S LEP K+E+ SSP  
Sbjct: 221  ISEVVGGVELLECVGFQLREEGGEMWAVMESATKDHIVLINMAVSLLEPQKMENSSSPVS 280

Query: 956  AIKDELVEQKQEPMEHKQIDRQIR 1027
                E      EP+  K++DRQIR
Sbjct: 281  EADVE------EPVVLKKVDRQIR 298


>ref|XP_002525983.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223534715|gb|EEF36407.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 470

 Score =  188 bits (478), Expect = 2e-45
 Identities = 131/323 (40%), Positives = 164/323 (50%), Gaps = 8/323 (2%)
 Frame = +2

Query: 83   SSSPSGKFKGQGRVLGXXXXXXXXXXXXXXXTPNRQPHNSENSKPLPQRRYDSDNQVQSN 262
            SSS SGKFKGQGRVLG                      +S +S P+ Q      N + + 
Sbjct: 21   SSSSSGKFKGQGRVLGG----------------GSSSSSSSSSGPINQ------NPIHAP 58

Query: 263  LSKLEPNAKPSNGFVASNSNNTKPLPQKINNSDIEVQGXXXXXXXXXXXXXXXXGFDPFD 442
             S+   + KP+      N + +K LPQ+   SD                     GF+PFD
Sbjct: 59   YSQ-STHPKPT-----PNPSISKSLPQQTPTSD-----QNQNKANLIPNPKPADGFNPFD 107

Query: 443  SLITTGKRYKNGYSLDNMFECPVCGGGFGSEEEVAAHIENCLXXXXXXXXXXXXXXX-DQ 619
            SLITTG+R +NGYSL N+FECP+CG  FGSE EV+ H+E+C+                  
Sbjct: 108  SLITTGERSQNGYSL-NVFECPICGQPFGSEGEVSIHVESCVDNNKNSSALVDGGNEYSG 166

Query: 620  SELEACVGAYVSGKPAEGSVSVLLKLLKNIVIEPENVKFRKIRMGNPKIKEAMVDVVXXX 799
            S L+ACV AY+SGKP EGS  V+L+L  NIV EPEN KFRKIRM NPKI+EA+ +V    
Sbjct: 167  SGLQACVSAYISGKPREGSAEVVLRLFTNIVKEPENAKFRKIRMSNPKIREAVSEVAGAV 226

Query: 800  XXXXXXXXXXXXXXXXMWAVMGVPSSERIGVVKNVISFLEPPKL-------EDLSSPAPA 958
                            MWA M VP  ER+ ++  VI  LEP K+       ED  S APA
Sbjct: 227  ELLEFIGFELREEVGEMWAFMEVPDEERVRLINKVIRLLEPRKIERQVVKAEDKPSVAPA 286

Query: 959  IKDELVEQKQEPMEHKQIDRQIR 1027
              +E VE        K+IDRQIR
Sbjct: 287  GTEEQVEP-------KKIDRQIR 302


>ref|XP_004162868.1| PREDICTED: UBX domain-containing protein 6-like [Cucumis sativus]
          Length = 472

 Score =  187 bits (476), Expect = 3e-45
 Identities = 124/321 (38%), Positives = 166/321 (51%), Gaps = 2/321 (0%)
 Frame = +2

Query: 71   NNPFSSSPSGKFKGQGRVLGXXXXXXXXXXXXXXXTPNRQPHNSENSKPLPQRRYDSDNQ 250
            NN  SSS S  FKGQGRVLG                      +S ++  +P R   S+N 
Sbjct: 16   NNTLSSSSSTNFKGQGRVLGSS--------------------SSGSTSSMPTR--PSENP 53

Query: 251  VQSNLSKLEPNAKPSNGFVASNSNNTKPLPQKINNSDIEVQGXXXXXXXXXXXXXXXXGF 430
            +    SK +  + PSN     +S N+KP    + NS    Q                 GF
Sbjct: 54   I----SKPKLVSPPSN-----SSANSKP---PVANSIATGQNRSDPSNTSNPDRIPADGF 101

Query: 431  DPFDSLITTGKRYKNGYSLDNMFECPVCGGGFGSEEEVAAHIENCLXXXXXXXXXXXXXX 610
            DPFDS IT+GKR  NGYSL N+FECP+CG  + SEEEV+ H+++C+              
Sbjct: 102  DPFDSFITSGKRSGNGYSL-NVFECPICGRSYRSEEEVSVHVDSCVNDSTAKGAEDPPTS 160

Query: 611  XDQ--SELEACVGAYVSGKPAEGSVSVLLKLLKNIVIEPENVKFRKIRMGNPKIKEAMVD 784
              +  SELEAC+G ++SGKP +GS+ ++LKLL+NIV EPEN KFRKIR+ NPKIKEA+ +
Sbjct: 161  DAEPRSELEACIGTFLSGKPTQGSLDIVLKLLRNIVREPENSKFRKIRLSNPKIKEAIGE 220

Query: 785  VVXXXXXXXXXXXXXXXXXXXMWAVMGVPSSERIGVVKNVISFLEPPKLEDLSSPAPAIK 964
             V                   MWA M VP+ E+I ++  VI  ++ PKLE+    A    
Sbjct: 221  AVGGVELLEFVGFKLQEEDGEMWATMEVPTEEQINLLCKVIDLIDQPKLEEQQKKASTAP 280

Query: 965  DELVEQKQEPMEHKQIDRQIR 1027
            D +        E K++DRQIR
Sbjct: 281  DLI--------EPKKVDRQIR 293


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