BLASTX nr result

ID: Panax21_contig00009619 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00009619
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAG80685.1| ribosomal protein L32 [Populus alba]                  148   4e-34
ref|XP_002316112.1| predicted protein [Populus trichocarpa] gi|2...   146   2e-33
ref|XP_002522475.1| conserved hypothetical protein [Ricinus comm...   142   2e-32
ref|XP_002311319.1| predicted protein [Populus trichocarpa] gi|2...   137   1e-30
gb|ADR71288.1| 50S ribosomal protein L32pA [Hevea brasiliensis]       135   3e-30

>dbj|BAG80685.1| ribosomal protein L32 [Populus alba]
          Length = 138

 Score =  148 bits (374), Expect = 4e-34
 Identities = 72/118 (61%), Positives = 89/118 (75%), Gaps = 5/118 (4%)
 Frame = -3

Query: 341 SAEGNNGCSPLVLVRWTHSIAKPSPLDSVFSNTVVSPQFVLPESDRSSDTN----GFGFS 174
           +AEGNNGC  L + +WTH +A   PLD    +++ +PQF LPE D + DT+     FGF+
Sbjct: 11  AAEGNNGCR-LGIRKWTHVVAMAPPLDGALESSIAAPQFTLPEFDANQDTSKNSSDFGFT 69

Query: 173 CLPFG-GGSMELMAVPRKKVSRHKRGIRNGPKALKPVPVIIRCKVCGRVKLPHFFCCS 3
              F  GGSMELMAVP++KV+ HKRGIRNGPKALKP+PVIIRCK CG+VKLPHF+CCS
Sbjct: 70  FPGFSFGGSMELMAVPKRKVTPHKRGIRNGPKALKPIPVIIRCKSCGQVKLPHFYCCS 127


>ref|XP_002316112.1| predicted protein [Populus trichocarpa]
           gi|224112197|ref|XP_002316116.1| predicted protein
           [Populus trichocarpa] gi|222865152|gb|EEF02283.1|
           predicted protein [Populus trichocarpa]
           gi|222865156|gb|EEF02287.1| predicted protein [Populus
           trichocarpa]
          Length = 138

 Score =  146 bits (369), Expect = 2e-33
 Identities = 72/118 (61%), Positives = 87/118 (73%), Gaps = 5/118 (4%)
 Frame = -3

Query: 341 SAEGNNGCSPLVLVRWTHSIAKPSPLDSVFSNTVVSPQFVLPESDRSSDTNG----FGFS 174
           +AE NNGC  L + +WTH +A   PLD    +++ SPQF LPE D + DT+     FGF+
Sbjct: 11  AAEANNGCR-LGIRKWTHVVAMAPPLDGALESSIASPQFTLPEFDANQDTSNNSSDFGFT 69

Query: 173 CLPFG-GGSMELMAVPRKKVSRHKRGIRNGPKALKPVPVIIRCKVCGRVKLPHFFCCS 3
              F  GGSMELMAVP++KV+ HKRGIRNGPKALKP PVIIRCK CG+VKLPHF+CCS
Sbjct: 70  FPGFSFGGSMELMAVPKRKVTPHKRGIRNGPKALKPTPVIIRCKSCGQVKLPHFYCCS 127


>ref|XP_002522475.1| conserved hypothetical protein [Ricinus communis]
           gi|223538360|gb|EEF39967.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 140

 Score =  142 bits (359), Expect = 2e-32
 Identities = 74/121 (61%), Positives = 84/121 (69%), Gaps = 8/121 (6%)
 Frame = -3

Query: 341 SAEGNNGCSPLVLVRWTHSIAKPSPLDSVFSNTVVSPQFVLPE------SDRSSDTNGFG 180
           +A GNNG + L  +RWTH  A P PLD   +N +  PQ VLPE      +  SS  N   
Sbjct: 10  AASGNNGYT-LGFLRWTHVAAMPPPLDGSINNAIAPPQMVLPEFNPNHDNSNSSYDNNLE 68

Query: 179 FSCLPFG--GGSMELMAVPRKKVSRHKRGIRNGPKALKPVPVIIRCKVCGRVKLPHFFCC 6
           F  LP    GGSM+LMAVP+KKVSRHKRGIRNGPKALKP PVIIRC+ CGRVKLPHF+CC
Sbjct: 69  FGFLPSFSFGGSMDLMAVPKKKVSRHKRGIRNGPKALKPTPVIIRCRSCGRVKLPHFYCC 128

Query: 5   S 3
           S
Sbjct: 129 S 129


>ref|XP_002311319.1| predicted protein [Populus trichocarpa] gi|222851139|gb|EEE88686.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score =  137 bits (344), Expect = 1e-30
 Identities = 69/119 (57%), Positives = 82/119 (68%), Gaps = 6/119 (5%)
 Frame = -3

Query: 341 SAEGNNGCSPLVLVRWTHSIAKPSPLDSVFSNTVVSPQFVLPESDRSSDTN------GFG 180
           +A GN+GC   +  RW H  A   PLD    + + SPQ  LPE D + DT+      GFG
Sbjct: 11  AAGGNSGCRSGIR-RWAHVPAMARPLDGALESYIASPQLTLPELDANQDTSSNSSNSGFG 69

Query: 179 FSCLPFGGGSMELMAVPRKKVSRHKRGIRNGPKALKPVPVIIRCKVCGRVKLPHFFCCS 3
                FGG SMELMAVP++KV+ HKRGIRNGPKALKP+PVIIRCK CG+VKLPHF+CCS
Sbjct: 70  LPGFSFGG-SMELMAVPKRKVTPHKRGIRNGPKALKPIPVIIRCKSCGQVKLPHFYCCS 127


>gb|ADR71288.1| 50S ribosomal protein L32pA [Hevea brasiliensis]
          Length = 139

 Score =  135 bits (341), Expect = 3e-30
 Identities = 69/121 (57%), Positives = 80/121 (66%), Gaps = 8/121 (6%)
 Frame = -3

Query: 341 SAEGNNGCSPLVLVRWTHSIAKPSPLDSVFSNTVVSPQFVLPESDRSSDTNG-------- 186
           +A G  GC+ L L+RW H  + PSPLD     T   P  VLPE D + D           
Sbjct: 10  TAVGKYGCT-LSLLRWAHIASMPSPLDGSLQRTTAPPDMVLPEFDTNPDNVNSSYRNNLE 68

Query: 185 FGFSCLPFGGGSMELMAVPRKKVSRHKRGIRNGPKALKPVPVIIRCKVCGRVKLPHFFCC 6
           FGF    FGG S+E+MAVP+KKVS HKRGIRNGPKALKP PVIIRC+ CGR+KLPHF+CC
Sbjct: 69  FGFPSFSFGG-SIEVMAVPKKKVSPHKRGIRNGPKALKPTPVIIRCRSCGRIKLPHFYCC 127

Query: 5   S 3
           S
Sbjct: 128 S 128


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