BLASTX nr result

ID: Panax21_contig00009616 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00009616
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283956.2| PREDICTED: U-box domain-containing protein 4...    92   3e-17
emb|CBI33734.3| unnamed protein product [Vitis vinifera]               92   3e-17
ref|XP_002332232.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
gb|AAO61490.1| arm repeat-containing protein [Nicotiana tabacum]       89   4e-16
ref|XP_002524955.1| ubiquitin-protein ligase, putative [Ricinus ...    86   2e-15

>ref|XP_002283956.2| PREDICTED: U-box domain-containing protein 4-like [Vitis vinifera]
          Length = 809

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 47/73 (64%), Positives = 57/73 (78%)
 Frame = -3

Query: 221 MEISKLKVLLKNISCLFHLSTHENINFEPVQRYYQKIEEMMKLLKPVLDVIVDTEIASDE 42
           MEIS LK LL  IS  F LS+H+NI+ EPV++YYQKIEE++KLLKP+L  I+D+EIASDE
Sbjct: 1   MEISLLKRLLNKISSFFLLSSHDNIDSEPVRKYYQKIEEILKLLKPILSTIIDSEIASDE 60

Query: 41  SLQKAFAGLSHSV 3
            L KAF  L  SV
Sbjct: 61  LLNKAFEELGRSV 73


>emb|CBI33734.3| unnamed protein product [Vitis vinifera]
          Length = 682

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 47/73 (64%), Positives = 57/73 (78%)
 Frame = -3

Query: 221 MEISKLKVLLKNISCLFHLSTHENINFEPVQRYYQKIEEMMKLLKPVLDVIVDTEIASDE 42
           MEIS LK LL  IS  F LS+H+NI+ EPV++YYQKIEE++KLLKP+L  I+D+EIASDE
Sbjct: 1   MEISLLKRLLNKISSFFLLSSHDNIDSEPVRKYYQKIEEILKLLKPILSTIIDSEIASDE 60

Query: 41  SLQKAFAGLSHSV 3
            L KAF  L  SV
Sbjct: 61  LLNKAFEELGRSV 73


>ref|XP_002332232.1| predicted protein [Populus trichocarpa] gi|222831845|gb|EEE70322.1|
           predicted protein [Populus trichocarpa]
          Length = 698

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 45/73 (61%), Positives = 55/73 (75%)
 Frame = -3

Query: 221 MEISKLKVLLKNISCLFHLSTHENINFEPVQRYYQKIEEMMKLLKPVLDVIVDTEIASDE 42
           MEIS L+VLLK IS   HLS  +NI+ +PVQ+YYQK EE++KLLKP+ D IVD+E+ASDE
Sbjct: 1   MEISLLEVLLKTISTFLHLSKDDNISSDPVQKYYQKAEEILKLLKPIFDAIVDSEVASDE 60

Query: 41  SLQKAFAGLSHSV 3
            L K F  L  SV
Sbjct: 61  VLNKDFLELGRSV 73


>gb|AAO61490.1| arm repeat-containing protein [Nicotiana tabacum]
          Length = 790

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 46/73 (63%), Positives = 57/73 (78%)
 Frame = -3

Query: 221 MEISKLKVLLKNISCLFHLSTHENINFEPVQRYYQKIEEMMKLLKPVLDVIVDTEIASDE 42
           MEIS LKVLL NISC  HLS+ ++I+ E V+RYY KIE+++KL+KP+LD IVD E AS E
Sbjct: 1   MEISLLKVLLNNISCFSHLSSSDHISGELVRRYYCKIEDILKLVKPILDAIVDVEAASGE 60

Query: 41  SLQKAFAGLSHSV 3
            L KAFAGL+  V
Sbjct: 61  LLLKAFAGLAQCV 73


>ref|XP_002524955.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223535790|gb|EEF37452.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 799

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 46/77 (59%), Positives = 56/77 (72%)
 Frame = -3

Query: 233 DQGLMEISKLKVLLKNISCLFHLSTHENINFEPVQRYYQKIEEMMKLLKPVLDVIVDTEI 54
           +  +MEIS LK LL NIS   HLS+ +NI  + VQ+ YQK EE++KLLKP+LD IVD+EI
Sbjct: 21  ESSVMEISLLKALLSNISSFLHLSSIDNICSDLVQKCYQKAEEILKLLKPILDAIVDSEI 80

Query: 53  ASDESLQKAFAGLSHSV 3
           ASDE L KAF  L  SV
Sbjct: 81  ASDEVLTKAFDELGQSV 97


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