BLASTX nr result

ID: Panax21_contig00009598 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00009598
         (590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278970.1| PREDICTED: uncharacterized protein LOC100250...   133   3e-29
ref|XP_002529444.1| RNA binding protein, putative [Ricinus commu...   120   2e-25
ref|XP_003617617.1| hypothetical protein MTR_5g093560 [Medicago ...   119   5e-25
ref|XP_003519589.1| PREDICTED: uncharacterized protein LOC100801...   115   6e-24
ref|NP_851194.1| SWAP/Surp domain-containing protein [Arabidopsi...   114   9e-24

>ref|XP_002278970.1| PREDICTED: uncharacterized protein LOC100250252 [Vitis vinifera]
          Length = 845

 Score =  133 bits (334), Expect = 3e-29
 Identities = 61/78 (78%), Positives = 69/78 (88%)
 Frame = -2

Query: 238 PPTEKLHQIIARTAMFVSKHGGQSEIILRVKQGDNPTFGFLIPDHQLHSYFRFLLDHREV 59
           PPTEKLHQIIARTAMFVS+HGGQSEI+LRVKQGDNPTFGFL+PDH LH+YFRFL+DHRE+
Sbjct: 144 PPTEKLHQIIARTAMFVSRHGGQSEIVLRVKQGDNPTFGFLMPDHHLHAYFRFLVDHREL 203

Query: 58  LNSDDGGKPQNENISDTE 5
           L SD  GK + E  +D E
Sbjct: 204 LESDVDGKTEEEKKADNE 221


>ref|XP_002529444.1| RNA binding protein, putative [Ricinus communis]
           gi|223531060|gb|EEF32910.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 915

 Score =  120 bits (300), Expect = 2e-25
 Identities = 55/72 (76%), Positives = 62/72 (86%)
 Frame = -2

Query: 238 PPTEKLHQIIARTAMFVSKHGGQSEIILRVKQGDNPTFGFLIPDHQLHSYFRFLLDHREV 59
           PPT K+HQIIARTAMFVSKHG QSEI+LRVKQGDNPTFGFL+PDH LH YFRFL+DH+E+
Sbjct: 146 PPTAKVHQIIARTAMFVSKHGAQSEIVLRVKQGDNPTFGFLLPDHNLHPYFRFLVDHQEL 205

Query: 58  LNSDDGGKPQNE 23
           + SD  GK   E
Sbjct: 206 VKSDVDGKSIEE 217


>ref|XP_003617617.1| hypothetical protein MTR_5g093560 [Medicago truncatula]
           gi|355518952|gb|AET00576.1| hypothetical protein
           MTR_5g093560 [Medicago truncatula]
          Length = 906

 Score =  119 bits (297), Expect = 5e-25
 Identities = 57/77 (74%), Positives = 64/77 (83%), Gaps = 2/77 (2%)
 Frame = -2

Query: 238 PPTEKLHQIIARTAMFVSKHGGQSEIILRVKQGDNPTFGFLIPDHQLHSYFRFLLDHREV 59
           PP EKLHQII+RTAMFVSKHG QSEIILRVKQGDNPTFGFL+PDH LH YFRFL+DH+E+
Sbjct: 142 PPNEKLHQIISRTAMFVSKHGSQSEIILRVKQGDNPTFGFLMPDHHLHPYFRFLVDHQEL 201

Query: 58  LNSD--DGGKPQNENIS 14
           L  D  D G   ++N S
Sbjct: 202 LKDDKNDAGSTLDKNRS 218


>ref|XP_003519589.1| PREDICTED: uncharacterized protein LOC100801276 [Glycine max]
          Length = 908

 Score =  115 bits (288), Expect = 6e-24
 Identities = 53/75 (70%), Positives = 64/75 (85%), Gaps = 2/75 (2%)
 Frame = -2

Query: 238 PPTEKLHQIIARTAMFVSKHGGQSEIILRVKQGDNPTFGFLIPDHQLHSYFRFLLDHREV 59
           PP E++HQII+RTA FVSKHG QSEIILRVKQGDNPTFGFL+PDH LH+YFRFL+DH+E+
Sbjct: 135 PPNERVHQIISRTATFVSKHGSQSEIILRVKQGDNPTFGFLMPDHHLHAYFRFLVDHQEL 194

Query: 58  L--NSDDGGKPQNEN 20
           L  + DDG   ++ N
Sbjct: 195 LKVDKDDGSSTEDMN 209


>ref|NP_851194.1| SWAP/Surp domain-containing protein [Arabidopsis thaliana]
           gi|222423144|dbj|BAH19551.1| AT5G55100 [Arabidopsis
           thaliana] gi|332009197|gb|AED96580.1| SWAP/Surp
           domain-containing protein [Arabidopsis thaliana]
          Length = 843

 Score =  114 bits (286), Expect = 9e-24
 Identities = 54/77 (70%), Positives = 63/77 (81%), Gaps = 1/77 (1%)
 Frame = -2

Query: 238 PPTEKLHQIIARTAMFVSKHGGQSEIILRVKQGDNPTFGFLIPDHQLHSYFRFLLDHREV 59
           PPTEKLHQII RT+ FVSKHGGQSEI+LRVKQGDNPTFGFL+PDH LH YFRFL+DH+E+
Sbjct: 145 PPTEKLHQIITRTSSFVSKHGGQSEIVLRVKQGDNPTFGFLMPDHHLHLYFRFLVDHQEL 204

Query: 58  LNSDDG-GKPQNENISD 11
           L       + +NE+  D
Sbjct: 205 LTGKSSVEEKKNESEKD 221


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