BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00009572
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]               133   2e-29
gb|AAY99339.1| pol-polyprotein [Silene latifolia]                     119   2e-25
gb|ABA97854.1| retrotransposon protein, putative, Ty3-gypsy subc...   118   4e-25
gb|ABA95229.1| retrotransposon protein, putative, Ty3-gypsy subc...   118   4e-25
emb|CAN65033.1| hypothetical protein VITISV_041069 [Vitis vinifera]   116   2e-24

>gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1859

 Score =  133 bits (334), Expect = 2e-29
 Identities = 68/148 (45%), Positives = 90/148 (60%)
 Frame = +3

Query: 3    VERNNNSIADALAKLATTDVNVFEGSVYLEILQHPSVHHEVVMCIDRTNCWLTPYLEYLA 182
            V R NN+ ADAL++LAT        S     L  PSV  E  M  D    W+TP  +YL 
Sbjct: 1436 VRRENNTRADALSRLATLKKKGAHRSAIHVTLAKPSVGTEECMATDTQPNWMTPIKQYLT 1495

Query: 183  DGVLPSDRMLAKKIKYKSANFVLIDGDLFRRAFSSPLLKCLTPSEAEYALREVHEGICGD 362
            DGV   D  L K +K ++A ++LI  DL+RR +S PLLKCL P +  Y + E+HEGICG 
Sbjct: 1496 DGVC--DPHLEKTMKLQAARYILIGEDLYRRGYSRPLLKCLGPEQVTYVMTELHEGICGT 1553

Query: 363  HMAAKSLAYKVLRQGYYWPTIFKEATEY 446
            H  A++++ K+LR GYYWPT+  + TEY
Sbjct: 1554 HSGARTMSAKILRAGYYWPTLQGDCTEY 1581


>gb|AAY99339.1| pol-polyprotein [Silene latifolia]
          Length = 1307

 Score =  119 bits (299), Expect = 2e-25
 Identities = 57/147 (38%), Positives = 94/147 (63%), Gaps = 2/147 (1%)
 Frame = +3

Query: 3    VERNNNSIADALAKLATTDVNVFEGSVYLEILQHPSVHHEVVMC--IDRTNCWLTPYLEY 176
            + R+ N+ AD L+KL ++ +     +V ++I    S+   V M   I+    W+TP ++Y
Sbjct: 845  IPRSENNRADTLSKLTSSTIKNVSRTVLVDIRNAKSITETVGMVGDIEAETTWMTPIMKY 904

Query: 177  LADGVLPSDRMLAKKIKYKSANFVLIDGDLFRRAFSSPLLKCLTPSEAEYALREVHEGIC 356
                 LP DR L++KIK  +A +++ +G+L+RR+   PLLKC+ P++A   L E+H+GIC
Sbjct: 905  KLTKGLPEDRSLSQKIKRIAARYLVFEGELYRRSVIRPLLKCVGPADAGLILTEIHDGIC 964

Query: 357  GDHMAAKSLAYKVLRQGYYWPTIFKEA 437
            G HM A++LA K LR GY+WPT+ +++
Sbjct: 965  GHHMGARTLADKALRAGYFWPTMLEDS 991


>gb|ABA97854.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1889

 Score =  118 bits (296), Expect = 4e-25
 Identities = 60/148 (40%), Positives = 85/148 (57%)
 Frame = +3

Query: 3    VERNNNSIADALAKLATTDVNVFEGSVYLEILQHPSVHHEVVMCIDRTNCWLTPYLEYLA 182
            + R  N  AD LAK A T     E S + +I+  PS   + V CI R   W  P L+YL 
Sbjct: 1508 ITREENGEADELAKAAATG-QPLENS-FFDIITQPSYEKKEVACIQREGDWREPILKYLV 1565

Query: 183  DGVLPSDRMLAKKIKYKSANFVLIDGDLFRRAFSSPLLKCLTPSEAEYALREVHEGICGD 362
               LP     AK+I+  S  + +++G L++   ++PLLKC+T  E    + E+HEG+CG 
Sbjct: 1566 SAQLPEKEEEAKRIQLTSKKYKVVEGQLYKSGVTAPLLKCVTREEGMKMVVEIHEGLCGA 1625

Query: 363  HMAAKSLAYKVLRQGYYWPTIFKEATEY 446
            H A +S+A KV+RQG YWPTI K+  +Y
Sbjct: 1626 HQAPRSVASKVIRQGIYWPTIMKDTEKY 1653


>gb|ABA95229.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1980

 Score =  118 bits (296), Expect = 4e-25
 Identities = 60/148 (40%), Positives = 85/148 (57%)
 Frame = +3

Query: 3    VERNNNSIADALAKLATTDVNVFEGSVYLEILQHPSVHHEVVMCIDRTNCWLTPYLEYLA 182
            + R  N  AD LAK A T     E S + +I+  PS   + V CI R   W  P L+YL 
Sbjct: 1526 ITREENGEADELAKAAATG-QPLENS-FFDIITQPSYEKKEVACIQREGDWREPILKYLV 1583

Query: 183  DGVLPSDRMLAKKIKYKSANFVLIDGDLFRRAFSSPLLKCLTPSEAEYALREVHEGICGD 362
               LP     AK+I+  S  + +++G L++   ++PLLKC+T  E    + E+HEG+CG 
Sbjct: 1584 SAQLPEKEEEAKRIQLTSKKYKVVEGQLYKSGVTAPLLKCVTREEGMKMVVEIHEGLCGA 1643

Query: 363  HMAAKSLAYKVLRQGYYWPTIFKEATEY 446
            H A +S+A KV+RQG YWPTI K+  +Y
Sbjct: 1644 HQAPRSVASKVIRQGIYWPTIMKDTEKY 1671


>emb|CAN65033.1| hypothetical protein VITISV_041069 [Vitis vinifera]
          Length = 981

 Score =  116 bits (291), Expect = 2e-24
 Identities = 63/153 (41%), Positives = 88/153 (57%), Gaps = 5/153 (3%)
 Frame = +3

Query: 3    VERNNNSIADALAKLATTDVNVFEGSVYLEILQHPSVHHEVVMCIDRTNC-----WLTPY 167
            ++R +N  ADALA +A +        + + +  +PSV    +  I  TN      W    
Sbjct: 549  IKRADNRHADALAGIAASLPIKEAIHLPIHVQANPSVAENSICNIVETNQTDGQEWTHDI 608

Query: 168  LEYLADGVLPSDRMLAKKIKYKSANFVLIDGDLFRRAFSSPLLKCLTPSEAEYALREVHE 347
             EYL  G LP D   A KI+ ++A F LI G L++R+F+ P L+CL  SEA Y L E+HE
Sbjct: 609  AEYLRTGTLPEDSKQAHKIRVQAARFTLIGGHLYKRSFTGPYLRCLGHSEARYVLAELHE 668

Query: 348  GICGDHMAAKSLAYKVLRQGYYWPTIFKEATEY 446
            GICG+H   +SLA++   QGYYWPT+ K+A  Y
Sbjct: 669  GICGNHAGGRSLAHRAHSQGYYWPTMKKDAAAY 701