BLASTX nr result

ID: Panax21_contig00009563 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00009563
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containi...    69   5e-10
ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containi...    69   5e-10
ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containi...    68   9e-10
ref|XP_002893064.1| hypothetical protein ARALYDRAFT_472198 [Arab...    68   9e-10
emb|CBI19766.3| unnamed protein product [Vitis vinifera]               68   9e-10

>ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like, partial [Cucumis sativus]
          Length = 1090

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/52 (61%), Positives = 39/52 (75%)
 Frame = +1

Query: 4   GMKPNRGTFVSIISAYSLAKKVDEGERVFSSMTQDFDILPCLDHCTAMVDLY 159
           G++PNRGT  SII AY +A  VD+G  VFSS+T++  ILP LDH  AMVDLY
Sbjct: 619 GIRPNRGTLASIIHAYGIAGMVDKGRHVFSSITEEHQILPTLDHYLAMVDLY 670


>ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like [Cucumis sativus]
          Length = 1463

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/52 (61%), Positives = 39/52 (75%)
 Frame = +1

Query: 4   GMKPNRGTFVSIISAYSLAKKVDEGERVFSSMTQDFDILPCLDHCTAMVDLY 159
           G++PNRGT  SII AY +A  VD+G  VFSS+T++  ILP LDH  AMVDLY
Sbjct: 619 GIRPNRGTLASIIHAYGIAGMVDKGRHVFSSITEEHQILPTLDHYLAMVDLY 670


>ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like [Vitis vinifera]
          Length = 1545

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 31/51 (60%), Positives = 44/51 (86%)
 Frame = +1

Query: 4   GMKPNRGTFVSIISAYSLAKKVDEGERVFSSMTQDFDILPCLDHCTAMVDL 156
           G+KP+RGTF+SII A+SL+  VD+G++VFSSM +D+ ILP L+H +AM+DL
Sbjct: 624 GVKPSRGTFLSIIYAFSLSGMVDKGKQVFSSMMEDYQILPGLEHHSAMIDL 674


>ref|XP_002893064.1| hypothetical protein ARALYDRAFT_472198 [Arabidopsis lyrata subsp.
           lyrata] gi|297338906|gb|EFH69323.1| hypothetical protein
           ARALYDRAFT_472198 [Arabidopsis lyrata subsp. lyrata]
          Length = 1490

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 30/53 (56%), Positives = 40/53 (75%)
 Frame = +1

Query: 1   EGMKPNRGTFVSIISAYSLAKKVDEGERVFSSMTQDFDILPCLDHCTAMVDLY 159
           +G+KPNRGT  SII A+ L   VDEG++VF S+  D+ I+P L+HC+AMV LY
Sbjct: 619 QGIKPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVSLY 671


>emb|CBI19766.3| unnamed protein product [Vitis vinifera]
          Length = 494

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 31/51 (60%), Positives = 44/51 (86%)
 Frame = +1

Query: 4   GMKPNRGTFVSIISAYSLAKKVDEGERVFSSMTQDFDILPCLDHCTAMVDL 156
           G+KP+RGTF+SII A+SL+  VD+G++VFSSM +D+ ILP L+H +AM+DL
Sbjct: 278 GVKPSRGTFLSIIYAFSLSGMVDKGKQVFSSMMEDYQILPGLEHHSAMIDL 328


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