BLASTX nr result

ID: Panax21_contig00009561 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00009561
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270912.1| PREDICTED: uncharacterized protein LOC100258...   170   1e-40
ref|XP_002532634.1| membrane associated ring finger 1,8, putativ...   161   6e-38
ref|XP_002280349.2| PREDICTED: uncharacterized protein LOC100259...   155   3e-36
ref|XP_002534507.1| membrane associated ring finger 1,8, putativ...   147   7e-34
ref|XP_002305850.1| predicted protein [Populus trichocarpa] gi|2...   144   1e-32

>ref|XP_002270912.1| PREDICTED: uncharacterized protein LOC100258737 [Vitis vinifera]
           gi|296087202|emb|CBI33576.3| unnamed protein product
           [Vitis vinifera]
          Length = 262

 Score =  170 bits (430), Expect = 1e-40
 Identities = 77/100 (77%), Positives = 86/100 (86%)
 Frame = +1

Query: 139 MGDHFVLLVDQLLTESTLEDAIGGKNRLQHATTSASEDMIINFSSHRMDLDLDSSSKKLV 318
           MGDHFVLLVD+LLTESTLE AI  KN+ QH T   SEDM+ NFS+HRMD+D+  S + LV
Sbjct: 1   MGDHFVLLVDRLLTESTLEAAIESKNQWQHTTPCGSEDMMTNFSAHRMDVDIGPSQRILV 60

Query: 319 ECRICHDEDEDSNMEIPCSCCGSLKYAHRGCVQRWCNEKG 438
           +CRICHDEDEDSNME+PCSC GSLKYAHRGCVQRWCNEKG
Sbjct: 61  QCRICHDEDEDSNMEVPCSCAGSLKYAHRGCVQRWCNEKG 100


>ref|XP_002532634.1| membrane associated ring finger 1,8, putative [Ricinus communis]
           gi|223527625|gb|EEF29737.1| membrane associated ring
           finger 1,8, putative [Ricinus communis]
          Length = 209

 Score =  161 bits (407), Expect = 6e-38
 Identities = 75/100 (75%), Positives = 83/100 (83%)
 Frame = +1

Query: 139 MGDHFVLLVDQLLTESTLEDAIGGKNRLQHATTSASEDMIINFSSHRMDLDLDSSSKKLV 318
           MGDHFVLLVD+LLTESTLE AI  KN  Q A   AS+D   + S+HRMD+D  SS +KLV
Sbjct: 1   MGDHFVLLVDRLLTESTLEAAIESKNHWQQAIPPASQDNTTDCSTHRMDVDFRSSPEKLV 60

Query: 319 ECRICHDEDEDSNMEIPCSCCGSLKYAHRGCVQRWCNEKG 438
           ECRICHDEDED+NME+PCSCCGSLKYAHR CVQRWCNEKG
Sbjct: 61  ECRICHDEDEDTNMEVPCSCCGSLKYAHRKCVQRWCNEKG 100


>ref|XP_002280349.2| PREDICTED: uncharacterized protein LOC100259487 [Vitis vinifera]
          Length = 240

 Score =  155 bits (392), Expect = 3e-36
 Identities = 73/100 (73%), Positives = 80/100 (80%)
 Frame = +1

Query: 139 MGDHFVLLVDQLLTESTLEDAIGGKNRLQHATTSASEDMIINFSSHRMDLDLDSSSKKLV 318
           MGDHFVLLVD+LLTESTLE AI  +NRL  A+ SA  D  ++  SH+MD    SS +KLV
Sbjct: 1   MGDHFVLLVDRLLTESTLEAAIESRNRLMQASVSAIADTKVDCKSHKMDFKHGSSPRKLV 60

Query: 319 ECRICHDEDEDSNMEIPCSCCGSLKYAHRGCVQRWCNEKG 438
           ECRIC DEDEDSNME PCSCCGSLKYAHR CVQRWCNEKG
Sbjct: 61  ECRICQDEDEDSNMETPCSCCGSLKYAHRSCVQRWCNEKG 100


>ref|XP_002534507.1| membrane associated ring finger 1,8, putative [Ricinus communis]
           gi|223525156|gb|EEF27877.1| membrane associated ring
           finger 1,8, putative [Ricinus communis]
          Length = 242

 Score =  147 bits (372), Expect = 7e-34
 Identities = 71/100 (71%), Positives = 80/100 (80%)
 Frame = +1

Query: 139 MGDHFVLLVDQLLTESTLEDAIGGKNRLQHATTSASEDMIINFSSHRMDLDLDSSSKKLV 318
           MGDHFVLLVD+LLTESTLE AI  +N+L  AT SA  +  I+ SS ++D    S+  K+V
Sbjct: 1   MGDHFVLLVDRLLTESTLEAAITSRNQLLQATESAVGETKIDISSKKVDFGDVSTPGKIV 60

Query: 319 ECRICHDEDEDSNMEIPCSCCGSLKYAHRGCVQRWCNEKG 438
           ECRIC DEDEDSNME PCSCCGSLKYAHRGCVQRWCNEKG
Sbjct: 61  ECRICQDEDEDSNMETPCSCCGSLKYAHRGCVQRWCNEKG 100


>ref|XP_002305850.1| predicted protein [Populus trichocarpa] gi|222848814|gb|EEE86361.1|
           predicted protein [Populus trichocarpa]
          Length = 237

 Score =  144 bits (362), Expect = 1e-32
 Identities = 68/100 (68%), Positives = 79/100 (79%)
 Frame = +1

Query: 139 MGDHFVLLVDQLLTESTLEDAIGGKNRLQHATTSASEDMIINFSSHRMDLDLDSSSKKLV 318
           MGDHFV LVD+LLTESTLE AI  +NRL+    SAS++    FS H MDL+L S + K V
Sbjct: 1   MGDHFVFLVDRLLTESTLEAAIESQNRLRQTMASASKENTKEFSPHWMDLELTSLAGKSV 60

Query: 319 ECRICHDEDEDSNMEIPCSCCGSLKYAHRGCVQRWCNEKG 438
           ECRICH+E++D NME+PCSC GSLKYAHR CVQRWCNEKG
Sbjct: 61  ECRICHEEEDDMNMEMPCSCRGSLKYAHRKCVQRWCNEKG 100


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