BLASTX nr result

ID: Panax21_contig00009528 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00009528
         (944 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21146.3| unnamed protein product [Vitis vinifera]              105   2e-20
ref|XP_002285540.1| PREDICTED: nuclear nucleic acid-binding prot...   105   2e-20
emb|CAN80797.1| hypothetical protein VITISV_002765 [Vitis vinifera]   105   2e-20
ref|XP_002324916.1| predicted protein [Populus trichocarpa] gi|2...   104   3e-20
ref|XP_002309677.1| predicted protein [Populus trichocarpa] gi|2...   102   2e-19

>emb|CBI21146.3| unnamed protein product [Vitis vinifera]
          Length = 182

 Score =  105 bits (261), Expect = 2e-20
 Identities = 59/90 (65%), Positives = 65/90 (72%)
 Frame = +2

Query: 497 AATRFIEHSLPNLTPEQKQSMREISSRGEGAKYKYLERNVHKKRKCEXXXXXXXXXXXXE 676
           AATRFIEHSLP+LTPEQKQSMREIS RGEG K K+ ER+  KKRK               
Sbjct: 91  AATRFIEHSLPDLTPEQKQSMREIS-RGEGPKIKHSERSGQKKRKYSSDKQSIQNAAQA- 148

Query: 677 FLEKASRELLGDNKGGFKGPLQPQDSDEEE 766
           FLEKA+RELLGDNK GFKGPLQ   SDE++
Sbjct: 149 FLEKAARELLGDNKDGFKGPLQVNSSDEDD 178


>ref|XP_002285540.1| PREDICTED: nuclear nucleic acid-binding protein C1D [Vitis
           vinifera]
          Length = 205

 Score =  105 bits (261), Expect = 2e-20
 Identities = 59/90 (65%), Positives = 65/90 (72%)
 Frame = +2

Query: 497 AATRFIEHSLPNLTPEQKQSMREISSRGEGAKYKYLERNVHKKRKCEXXXXXXXXXXXXE 676
           AATRFIEHSLP+LTPEQKQSMREIS RGEG K K+ ER+  KKRK               
Sbjct: 114 AATRFIEHSLPDLTPEQKQSMREIS-RGEGPKIKHSERSGQKKRKYSSDKQSIQNAAQA- 171

Query: 677 FLEKASRELLGDNKGGFKGPLQPQDSDEEE 766
           FLEKA+RELLGDNK GFKGPLQ   SDE++
Sbjct: 172 FLEKAARELLGDNKDGFKGPLQVNSSDEDD 201



 Score = 73.6 bits (179), Expect = 7e-11
 Identities = 32/75 (42%), Positives = 48/75 (64%)
 Frame = +3

Query: 144 VVPDSVMEAVKRTSNNIEEFKAHFPDFLTHCTPESLAELEPLERAQSXXXXXXXXXXXXX 323
           +VP+S ME+V RT  N+++ + H  DFL+ C P+ +A+L PL+RAQ+             
Sbjct: 5   LVPESAMESVGRTLANVKDMQTHLKDFLSLCDPQVIAQLPPLQRAQAHLTLAKATTTLFA 64

Query: 324 VRLRCNGVHPDDHPV 368
           + LRC GV+PDDHP+
Sbjct: 65  LNLRCKGVNPDDHPI 79


>emb|CAN80797.1| hypothetical protein VITISV_002765 [Vitis vinifera]
          Length = 205

 Score =  105 bits (261), Expect = 2e-20
 Identities = 59/90 (65%), Positives = 65/90 (72%)
 Frame = +2

Query: 497 AATRFIEHSLPNLTPEQKQSMREISSRGEGAKYKYLERNVHKKRKCEXXXXXXXXXXXXE 676
           AATRFIEHSLP+LTPEQKQSMREIS RGEG K K+ ER+  KKRK               
Sbjct: 114 AATRFIEHSLPDLTPEQKQSMREIS-RGEGPKIKHSERSGQKKRKYSSDKQSIQNAAQA- 171

Query: 677 FLEKASRELLGDNKGGFKGPLQPQDSDEEE 766
           FLEKA+RELLGDNK GFKGPLQ   SDE++
Sbjct: 172 FLEKAARELLGDNKDGFKGPLQVNSSDEDD 201



 Score = 74.7 bits (182), Expect = 3e-11
 Identities = 33/75 (44%), Positives = 48/75 (64%)
 Frame = +3

Query: 144 VVPDSVMEAVKRTSNNIEEFKAHFPDFLTHCTPESLAELEPLERAQSXXXXXXXXXXXXX 323
           VVP+S ME+V RT  N+++ + H  DFL+ C P+ +A+L PL+RAQ+             
Sbjct: 5   VVPESAMESVGRTLANVKDMQTHLKDFLSLCDPQVIAQLPPLQRAQAHLTLAKATTTLFA 64

Query: 324 VRLRCNGVHPDDHPV 368
           + LRC GV+PDDHP+
Sbjct: 65  LNLRCKGVNPDDHPI 79


>ref|XP_002324916.1| predicted protein [Populus trichocarpa] gi|222866350|gb|EEF03481.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score =  104 bits (260), Expect = 3e-20
 Identities = 54/94 (57%), Positives = 67/94 (71%)
 Frame = +2

Query: 497 AATRFIEHSLPNLTPEQKQSMREISSRGEGAKYKYLERNVHKKRKCEXXXXXXXXXXXXE 676
           AATRFIEHSLP+LTPEQ++SMR+IS RGEG+K KY+ER+ HKKRK +            E
Sbjct: 119 AATRFIEHSLPDLTPEQRKSMRDIS-RGEGSKIKYVERSTHKKRKYDTSEKQSVKAAAQE 177

Query: 677 FLEKASRELLGDNKGGFKGPLQPQDSDEEELSIE 778
           FLEKA+REL G N  GFKGPL   DS  ++  ++
Sbjct: 178 FLEKAARELFGGNTDGFKGPLVKVDSASDDNPVD 211



 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 30/74 (40%), Positives = 45/74 (60%)
 Frame = +3

Query: 147 VPDSVMEAVKRTSNNIEEFKAHFPDFLTHCTPESLAELEPLERAQSXXXXXXXXXXXXXV 326
           VP+S +EAV+RT  N++  + H  +FL+   P+ L E+ PL+RAQS             +
Sbjct: 11  VPESTIEAVERTVANLKLVETHLLEFLSLANPDVLDEMPPLQRAQSLFMLAKATSTIFAL 70

Query: 327 RLRCNGVHPDDHPV 368
           RLR  G+HPD+HP+
Sbjct: 71  RLRTTGIHPDEHPI 84


>ref|XP_002309677.1| predicted protein [Populus trichocarpa] gi|222855653|gb|EEE93200.1|
           predicted protein [Populus trichocarpa]
          Length = 212

 Score =  102 bits (253), Expect = 2e-19
 Identities = 53/90 (58%), Positives = 62/90 (68%)
 Frame = +2

Query: 497 AATRFIEHSLPNLTPEQKQSMREISSRGEGAKYKYLERNVHKKRKCEXXXXXXXXXXXXE 676
           AATRFIEHSLP+LTPEQ++SMR IS +GEG K KY ER+  KKRKC+            E
Sbjct: 119 AATRFIEHSLPDLTPEQRKSMRNIS-KGEGPKIKYTERSTRKKRKCDTSETQSVQAAAQE 177

Query: 677 FLEKASRELLGDNKGGFKGPLQPQDSDEEE 766
           FLEKA+REL G +  GFKGPL   DS  E+
Sbjct: 178 FLEKAARELFGGSTDGFKGPLIKTDSSSED 207



 Score = 70.1 bits (170), Expect = 7e-10
 Identities = 32/75 (42%), Positives = 47/75 (62%)
 Frame = +3

Query: 144 VVPDSVMEAVKRTSNNIEEFKAHFPDFLTHCTPESLAELEPLERAQSXXXXXXXXXXXXX 323
           VVP+S MEAV+RT  N+++ + H  +FL+   P+ L E+ PL+RAQS             
Sbjct: 10  VVPESAMEAVERTLANVKQVETHLLEFLSLANPDVLDEMPPLQRAQSLFMLAKATSTLFA 69

Query: 324 VRLRCNGVHPDDHPV 368
           +RLR  G+HPD+HP+
Sbjct: 70  LRLRTTGIHPDEHPI 84


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