BLASTX nr result

ID: Panax21_contig00009000 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00009000
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532335.1| conserved hypothetical protein [Ricinus comm...   113   6e-32
ref|XP_002278205.1| PREDICTED: TBCC domain-containing protein 1-...   113   4e-31
emb|CBI30042.3| unnamed protein product [Vitis vinifera]              113   4e-31
ref|XP_003554198.1| PREDICTED: TBCC domain-containing protein 1-...   112   3e-30
ref|XP_003521203.1| PREDICTED: TBCC domain-containing protein 1-...   110   7e-30

>ref|XP_002532335.1| conserved hypothetical protein [Ricinus communis]
           gi|223527952|gb|EEF30037.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 572

 Score =  113 bits (283), Expect(2) = 6e-32
 Identities = 52/64 (81%), Positives = 56/64 (87%)
 Frame = +3

Query: 3   SQNAPFFANSDPDMPAIPVPATQVHDWLLQNISSTLEHISERVSLKENGPTSASDQDVPM 182
           SQ APFFANSDPDMPA+PVPA QVHDW+ QNISS LEHI+ER+S KENGP SASDQDV M
Sbjct: 240 SQAAPFFANSDPDMPAVPVPAAQVHDWISQNISSALEHITERISAKENGPPSASDQDVAM 299

Query: 183 ADVC 194
           AD C
Sbjct: 300 ADAC 303



 Score = 48.9 bits (115), Expect(2) = 6e-32
 Identities = 25/33 (75%), Positives = 30/33 (90%), Gaps = 1/33 (3%)
 Frame = +1

Query: 223 RGLSFIEGISKSSFVKKASDLKGSSIK-MNVND 318
           RG SFIEGISKSS+VK+ASDLKGSS+K +N +D
Sbjct: 314 RGSSFIEGISKSSYVKQASDLKGSSVKVLNCHD 346


>ref|XP_002278205.1| PREDICTED: TBCC domain-containing protein 1-like [Vitis vinifera]
          Length = 568

 Score =  113 bits (283), Expect(2) = 4e-31
 Identities = 52/64 (81%), Positives = 57/64 (89%)
 Frame = +3

Query: 3   SQNAPFFANSDPDMPAIPVPATQVHDWLLQNISSTLEHISERVSLKENGPTSASDQDVPM 182
           SQ APFFANSDPDMPA+PVPA QVHDW+LQNI+S LEHISERVS KENGP +A+DQDV M
Sbjct: 236 SQAAPFFANSDPDMPAVPVPAAQVHDWVLQNIASALEHISERVSAKENGPPNATDQDVAM 295

Query: 183 ADVC 194
           AD C
Sbjct: 296 ADAC 299



 Score = 46.2 bits (108), Expect(2) = 4e-31
 Identities = 24/33 (72%), Positives = 29/33 (87%), Gaps = 1/33 (3%)
 Frame = +1

Query: 223 RGLSFIEGISKSSFVKKASDLKGSSIK-MNVND 318
           RG SFIEGISKSS+VK+A DLKGSS+K +N +D
Sbjct: 310 RGPSFIEGISKSSYVKQAPDLKGSSLKVLNCHD 342


>emb|CBI30042.3| unnamed protein product [Vitis vinifera]
          Length = 466

 Score =  113 bits (283), Expect(2) = 4e-31
 Identities = 52/64 (81%), Positives = 57/64 (89%)
 Frame = +3

Query: 3   SQNAPFFANSDPDMPAIPVPATQVHDWLLQNISSTLEHISERVSLKENGPTSASDQDVPM 182
           SQ APFFANSDPDMPA+PVPA QVHDW+LQNI+S LEHISERVS KENGP +A+DQDV M
Sbjct: 134 SQAAPFFANSDPDMPAVPVPAAQVHDWVLQNIASALEHISERVSAKENGPPNATDQDVAM 193

Query: 183 ADVC 194
           AD C
Sbjct: 194 ADAC 197



 Score = 46.2 bits (108), Expect(2) = 4e-31
 Identities = 24/33 (72%), Positives = 29/33 (87%), Gaps = 1/33 (3%)
 Frame = +1

Query: 223 RGLSFIEGISKSSFVKKASDLKGSSIK-MNVND 318
           RG SFIEGISKSS+VK+A DLKGSS+K +N +D
Sbjct: 208 RGPSFIEGISKSSYVKQAPDLKGSSLKVLNCHD 240


>ref|XP_003554198.1| PREDICTED: TBCC domain-containing protein 1-like [Glycine max]
          Length = 566

 Score =  112 bits (279), Expect(2) = 3e-30
 Identities = 51/64 (79%), Positives = 57/64 (89%)
 Frame = +3

Query: 3   SQNAPFFANSDPDMPAIPVPATQVHDWLLQNISSTLEHISERVSLKENGPTSASDQDVPM 182
           SQ++PFFANSDPDMPA+PVPA QVHDWLLQNI+S L++ISER S KENGP SASDQDV M
Sbjct: 233 SQSSPFFANSDPDMPAVPVPAAQVHDWLLQNIASALDYISERTSSKENGPASASDQDVAM 292

Query: 183 ADVC 194
           AD C
Sbjct: 293 ADAC 296



 Score = 45.1 bits (105), Expect(2) = 3e-30
 Identities = 21/28 (75%), Positives = 25/28 (89%)
 Frame = +1

Query: 223 RGLSFIEGISKSSFVKKASDLKGSSIKM 306
           R  SFIEGISKSS+VK ASD+KGSS+K+
Sbjct: 308 RSASFIEGISKSSYVKHASDIKGSSVKV 335


>ref|XP_003521203.1| PREDICTED: TBCC domain-containing protein 1-like [Glycine max]
          Length = 566

 Score =  110 bits (275), Expect(2) = 7e-30
 Identities = 50/64 (78%), Positives = 56/64 (87%)
 Frame = +3

Query: 3   SQNAPFFANSDPDMPAIPVPATQVHDWLLQNISSTLEHISERVSLKENGPTSASDQDVPM 182
           SQ++PFFANSDPDMPA+PVPA QVHDWLLQNI++ LE+ISER S KENGP SASDQDV M
Sbjct: 233 SQSSPFFANSDPDMPAVPVPAAQVHDWLLQNIAAALEYISERTSSKENGPASASDQDVAM 292

Query: 183 ADVC 194
            D C
Sbjct: 293 TDAC 296



 Score = 45.1 bits (105), Expect(2) = 7e-30
 Identities = 21/28 (75%), Positives = 25/28 (89%)
 Frame = +1

Query: 223 RGLSFIEGISKSSFVKKASDLKGSSIKM 306
           R  SFIEGISKSS+VK ASD+KGSS+K+
Sbjct: 308 RSASFIEGISKSSYVKHASDIKGSSVKV 335


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