BLASTX nr result
ID: Panax21_contig00008996
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00008996
(1425 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002515265.1| pentatricopeptide repeat-containing protein,... 471 e-130
ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 464 e-128
ref|XP_004146883.1| PREDICTED: pentatricopeptide repeat-containi... 463 e-128
ref|XP_002320971.1| predicted protein [Populus trichocarpa] gi|2... 456 e-126
ref|XP_002301516.1| predicted protein [Populus trichocarpa] gi|2... 450 e-124
>ref|XP_002515265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223545745|gb|EEF47249.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 504
Score = 471 bits (1212), Expect = e-130
Identities = 240/417 (57%), Positives = 305/417 (73%), Gaps = 3/417 (0%)
Frame = +2
Query: 2 IMEWMEKRDINLSHKDCAVRLDLISKANGISAAEDYFSGLSPSAKNRLT-YGALLNCYCR 178
IMEWMEKR +N S+ D A+RLDLI KA GI+AAEDYF+GLSPSAKN T YGALLNCYC+
Sbjct: 92 IMEWMEKRKMNFSYADRAIRLDLIGKARGIAAAEDYFNGLSPSAKNHHTSYGALLNCYCK 151
Query: 179 EKLDDKAHALFEKMDEMNIASNTLAFNNLMSLYMRLNLPEKVHPFVQEMKNRKIPLSTFS 358
E + DKA ALF++MDE ++L FNNLMS+YMRL PEKV P V EMK RK+ +F+
Sbjct: 152 ELMSDKALALFQEMDEKKFLYSSLPFNNLMSMYMRLGQPEKVPPLVDEMKKRKVSPCSFT 211
Query: 359 YNIWMNSYSCLNDIEGVERVFEEITSDNG--NLCNWTTYSNLAVVYVKAGLHEKAESALK 532
YNIWM SY CLND +GV+RV EI +D G NL WTTYSNLA +Y+KAG+ EKAESALK
Sbjct: 212 YNIWMQSYGCLNDFQGVDRVLREIVNDGGKDNL-QWTTYSNLATIYLKAGIFEKAESALK 270
Query: 533 KSEDEIKKKGGHDCQAFHFLLSLYAQTSNLHEVQRIWTCIKSASRITTNMSYLVMLQALA 712
K E + G + +A+HFL+S+YA T N +EV R+W +KS+ + N+SYLVMLQALA
Sbjct: 271 KLEAIM---GFRNREAYHFLISIYAGTGNSNEVNRVWGLLKSSFNMINNLSYLVMLQALA 327
Query: 713 RLDEIDGLKKLFEEWESTCSNYDMRLANTVIGFYLKHDMIEEAEKIFRDAIKISLGPFCW 892
+L +++G+ K F EWES C+NYDMR+AN I +L+HDM EEAE IF DA+K + GPF
Sbjct: 328 KLKDVEGVAKCFREWESGCTNYDMRIANVAIRVFLQHDMYEEAELIFDDALKRTRGPFFK 387
Query: 893 TWRVFMCFYLESRQIDVALRYLEAAVSASELEGYEWHPSLPDVNKFMEYFEEERDVEGAE 1072
FM F+L+ Q+D+AL+++ AA SE E +EW P VN + +YF E+DV+GAE
Sbjct: 388 ARERFMLFFLKIHQLDLALKHMRAAF--SESEKHEWKPLQETVNAYFDYFRTEKDVDGAE 445
Query: 1073 KLCGILKKANCLDSEAYKLLLQIYVAASKTAPEIRQRIKDDGVEINSELEDLLRKVC 1243
KL ILK NCL+S Y LLL+ Y+AA K APE+RQR+++D +EI+ ELE LL VC
Sbjct: 446 KLSKILKHINCLNSSVYSLLLKTYIAAGKLAPEMRQRLEEDNIEISDELEYLLESVC 502
>ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02370, mitochondrial-like [Vitis vinifera]
Length = 506
Score = 464 bits (1193), Expect = e-128
Identities = 240/413 (58%), Positives = 306/413 (74%)
Frame = +2
Query: 2 IMEWMEKRDINLSHKDCAVRLDLISKANGISAAEDYFSGLSPSAKNRLTYGALLNCYCRE 181
IM+WME R I S+ D AVRLDL+SK G++ AE+YF+ LSPSAKN LTYG LLNCYC+E
Sbjct: 98 IMDWMENRKIFFSYADYAVRLDLLSKTKGLATAEEYFNNLSPSAKNLLTYGTLLNCYCKE 157
Query: 182 KLDDKAHALFEKMDEMNIASNTLAFNNLMSLYMRLNLPEKVHPFVQEMKNRKIPLSTFSY 361
K+++KA ALFEKMDE+N AS +L FNNLMSL+MRL PE V P V EMK R I TF+Y
Sbjct: 158 KMEEKALALFEKMDELNFASTSLTFNNLMSLHMRLGKPEMVPPLVDEMKKRSISPDTFTY 217
Query: 362 NIWMNSYSCLNDIEGVERVFEEITSDNGNLCNWTTYSNLAVVYVKAGLHEKAESALKKSE 541
NI M SY+ LNDIEG ERV EEI +N + +WTTYSNLA VYV A L EKAE ALKK E
Sbjct: 218 NILMQSYARLNDIEGAERVLEEIKRENEDKLSWTTYSNLAAVYVNARLFEKAELALKKLE 277
Query: 542 DEIKKKGGHDCQAFHFLLSLYAQTSNLHEVQRIWTCIKSASRITTNMSYLVMLQALARLD 721
+E+ G HD A+HFL+SLYA +NL EV R+W +KSA T NMSY +MLQALA L+
Sbjct: 278 EEM---GFHDRLAYHFLISLYAGINNLSEVNRVWNSLKSAFPKTNNMSYFIMLQALANLN 334
Query: 722 EIDGLKKLFEEWESTCSNYDMRLANTVIGFYLKHDMIEEAEKIFRDAIKISLGPFCWTWR 901
++DGLK FEEW+S+C ++D+RLAN + +L DMI++AE I +A+K S GPF
Sbjct: 335 DVDGLKICFEEWKSSCFSFDVRLANVAVRAFLGWDMIKDAESILYEAVKRSSGPFYTALD 394
Query: 902 VFMCFYLESRQIDVALRYLEAAVSASELEGYEWHPSLPDVNKFMEYFEEERDVEGAEKLC 1081
+FM +L+ R+ID AL+Y+EAA ASE++ EW P+ V F++YFEEE+DVEGAEK C
Sbjct: 395 MFMAHHLKVREIDTALKYMEAA--ASEVKNNEWQPAPERVLAFLKYFEEEKDVEGAEKFC 452
Query: 1082 GILKKANCLDSEAYKLLLQIYVAASKTAPEIRQRIKDDGVEINSELEDLLRKV 1240
ILK + LDS AY+LLLQ VAA +T PE+R+R+K+D +E++S +DLL++V
Sbjct: 453 KILKNISGLDSNAYQLLLQTXVAAGRTEPEMRKRMKEDDIEVDS--KDLLQRV 503
>ref|XP_004146883.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial-like [Cucumis sativus]
gi|449518825|ref|XP_004166436.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g02370,
mitochondrial-like [Cucumis sativus]
Length = 474
Score = 463 bits (1191), Expect = e-128
Identities = 234/414 (56%), Positives = 302/414 (72%)
Frame = +2
Query: 2 IMEWMEKRDINLSHKDCAVRLDLISKANGISAAEDYFSGLSPSAKNRLTYGALLNCYCRE 181
IMEWME R IN S D A+RLDLISK NG++AAE YF L PSAKNR TYGALLNCYC+E
Sbjct: 63 IMEWMETRKINYSFTDYALRLDLISKVNGVTAAEKYFYDLPPSAKNRCTYGALLNCYCKE 122
Query: 182 KLDDKAHALFEKMDEMNIASNTLAFNNLMSLYMRLNLPEKVHPFVQEMKNRKIPLSTFSY 361
+++KA LF+KMDE+ I S +L+FNNLM++YMR++ PEKV P + EMK R L+TF+Y
Sbjct: 123 MMEEKALTLFKKMDELKI-STSLSFNNLMTMYMRMDHPEKVPPLIGEMKQRGFYLTTFTY 181
Query: 362 NIWMNSYSCLNDIEGVERVFEEITSDNGNLCNWTTYSNLAVVYVKAGLHEKAESALKKSE 541
N+WMNS + LNDI VE + EE+ ++ N +WTTYSNLA YVKAG EKAE ALKK E
Sbjct: 182 NVWMNSCASLNDIGKVEEILEEMKMEDRNKFDWTTYSNLASFYVKAGQFEKAELALKKLE 241
Query: 542 DEIKKKGGHDCQAFHFLLSLYAQTSNLHEVQRIWTCIKSASRITTNMSYLVMLQALARLD 721
+E+K +D +H L+SLYA TSNL EV RIW +KS TN+SYLVMLQAL +L
Sbjct: 242 EEMKSDK-NDRLVYHCLISLYASTSNLSEVNRIWNALKSVYSTMTNISYLVMLQALRKLK 300
Query: 722 EIDGLKKLFEEWESTCSNYDMRLANTVIGFYLKHDMIEEAEKIFRDAIKISLGPFCWTWR 901
+I+GLK+ ++EWES C N+D+R+ N +IG YL+ DM E+A IF DA K S GPF
Sbjct: 301 DIEGLKRTYKEWESNCRNFDLRIVNDIIGAYLQQDMYEDAAMIFEDATKRSKGPFSRARE 360
Query: 902 VFMCFYLESRQIDVALRYLEAAVSASELEGYEWHPSLPDVNKFMEYFEEERDVEGAEKLC 1081
+FM ++L+ +Q+D A +LE+A+S S+ + EWHPSL F+ YFEEE+DVEGAE
Sbjct: 361 MFMVYFLKLKQVDSAFSHLESALSESKEK--EWHPSLATTTAFLNYFEEEKDVEGAEDFA 418
Query: 1082 GILKKANCLDSEAYKLLLQIYVAASKTAPEIRQRIKDDGVEINSELEDLLRKVC 1243
ILK+ CLD+ Y LLL+ YVAA K AP++R+R+K+D +EI+SELE+LL VC
Sbjct: 419 RILKRLKCLDASGYHLLLKTYVAAGKLAPDMRKRLKEDDIEISSELEELLGTVC 472
>ref|XP_002320971.1| predicted protein [Populus trichocarpa] gi|222861744|gb|EEE99286.1|
predicted protein [Populus trichocarpa]
Length = 473
Score = 456 bits (1174), Expect = e-126
Identities = 230/414 (55%), Positives = 304/414 (73%)
Frame = +2
Query: 2 IMEWMEKRDINLSHKDCAVRLDLISKANGISAAEDYFSGLSPSAKNRLTYGALLNCYCRE 181
+MEWM+KR +N+SH AV LDLI+K GI+AAE+YF GLSPS +N T+GALL+CYCRE
Sbjct: 67 VMEWMQKRKMNVSH---AVYLDLIAKKEGIAAAENYFDGLSPSEQNHSTHGALLSCYCRE 123
Query: 182 KLDDKAHALFEKMDEMNIASNTLAFNNLMSLYMRLNLPEKVHPFVQEMKNRKIPLSTFSY 361
+ +KA LFEKMD+M +L FNNL+SL++RL+ PEKV P VQEMK + + TF+Y
Sbjct: 124 LMSEKALTLFEKMDKMKFLLTSLPFNNLISLHLRLDQPEKVLPIVQEMKQKGVSPCTFTY 183
Query: 362 NIWMNSYSCLNDIEGVERVFEEITSDNGNLCNWTTYSNLAVVYVKAGLHEKAESALKKSE 541
N+WM SY CLND EGVERV +E+ D +WTTY+NLA +YVKAG +KAESALKK E
Sbjct: 184 NMWMQSYGCLNDFEGVERVLDEMKMDGQKNFSWTTYTNLATIYVKAGHFDKAESALKKVE 243
Query: 542 DEIKKKGGHDCQAFHFLLSLYAQTSNLHEVQRIWTCIKSASRITTNMSYLVMLQALARLD 721
++I++ +A+HFL++LYA TSNL EV R+W +KS TTN+SYL ML LA+L
Sbjct: 244 EQIERDYR---EAYHFLITLYAGTSNLGEVNRVWNSLKSNFHTTTNVSYLTMLHTLAKLK 300
Query: 722 EIDGLKKLFEEWESTCSNYDMRLANTVIGFYLKHDMIEEAEKIFRDAIKISLGPFCWTWR 901
+++GL K F+EWES+C +YDMRLAN I L+HDM EEA IF DA+K + G F
Sbjct: 301 DVEGLLKCFKEWESSCHSYDMRLANVAIRACLEHDMYEEAALIFDDALKRTEGLFFNARE 360
Query: 902 VFMCFYLESRQIDVALRYLEAAVSASELEGYEWHPSLPDVNKFMEYFEEERDVEGAEKLC 1081
+FM F+L++ Q+D+AL++++AA SE++ EW P V+ F YFE+E+DV GAE+LC
Sbjct: 361 MFMVFFLKNHQLDLALKHMKAAF--SEVKEIEWQPEPKTVSAFFAYFEDEKDVNGAERLC 418
Query: 1082 GILKKANCLDSEAYKLLLQIYVAASKTAPEIRQRIKDDGVEINSELEDLLRKVC 1243
ILK N LDS AY LLL+ Y+AA K APE+RQR+++DG+EIN ELE+LL +VC
Sbjct: 419 KILKHINRLDSNAYDLLLKTYIAAGKLAPEMRQRLEEDGIEINPELENLLERVC 472
>ref|XP_002301516.1| predicted protein [Populus trichocarpa] gi|222843242|gb|EEE80789.1|
predicted protein [Populus trichocarpa]
Length = 476
Score = 450 bits (1158), Expect = e-124
Identities = 227/423 (53%), Positives = 304/423 (71%), Gaps = 10/423 (2%)
Frame = +2
Query: 2 IMEWMEKRDINLSHKDCAVRLDLISKANGISAAEDYFSGLSPSAKNRLTYGALLNCYCRE 181
+MEWM+KR +N SH D AV LDL +K GI+AAE+YF L PS +N +TY LLNCYC+E
Sbjct: 53 VMEWMQKRKMNFSHVDHAVYLDLTAKTKGIAAAENYFDNLPPSVQNHVTYSTLLNCYCKE 112
Query: 182 KLDDKAHALFEKMDEMNIASNTLAFNNLMSLYMRLNLPEKVHPFVQEMKNRKIPLSTFSY 361
+ +KA LFEKMD+M + S ++ FNNLM+L+MRL PEKV VQEMK R + TF+Y
Sbjct: 113 LMSEKALTLFEKMDKMKLLSTSMPFNNLMTLHMRLGQPEKVLGIVQEMKQRGVSPGTFTY 172
Query: 362 NIWMNSYSCLNDIEGVERVFEEITSDNGNLCNWTTYSNLAVVYVKAGLHEKAESALKKSE 541
NIWM SY CLND EGV+RV +E+ +D +WTTYSNLA +YVKAGL +KAESAL+K E
Sbjct: 173 NIWMQSYGCLNDFEGVQRVLDEMKTDGKENFSWTTYSNLATIYVKAGLFDKAESALRKLE 232
Query: 542 DEI--------KKKGGHDC--QAFHFLLSLYAQTSNLHEVQRIWTCIKSASRITTNMSYL 691
++I +KK HD +A+HFL+SLYA TSNL EV R+W +KS+ R TTN+SYL
Sbjct: 233 EQIECGRDCDFQKKRRHDADREAYHFLISLYAGTSNLSEVHRVWNSLKSSFRTTTNISYL 292
Query: 692 VMLQALARLDEIDGLKKLFEEWESTCSNYDMRLANTVIGFYLKHDMIEEAEKIFRDAIKI 871
+LQALA+L +++G+ K F+EWES+C +YDM LAN I L+HDM EEA IF +A+K
Sbjct: 293 NVLQALAKLKDVEGILKCFKEWESSCHSYDMGLANVAIRACLEHDMYEEAASIFDEALKR 352
Query: 872 SLGPFCWTWRVFMCFYLESRQIDVALRYLEAAVSASELEGYEWHPSLPDVNKFMEYFEEE 1051
+ G F +FM F+L++ Q D+AL++++AA SE + EW P V+ F+ YFE+
Sbjct: 353 TKGLFFKAREMFMVFFLKNHQPDLALKHMKAAF--SEAKEIEWQPDQKTVSAFLNYFEDG 410
Query: 1052 RDVEGAEKLCGILKKANCLDSEAYKLLLQIYVAASKTAPEIRQRIKDDGVEINSELEDLL 1231
+DV+GAE+LC I K+ N L+S AY LLL+ Y AA + APE+RQR+++D +EIN ELE+LL
Sbjct: 411 KDVDGAERLCKIWKQINRLNSNAYILLLKTYTAAGRLAPEMRQRLEEDNIEINPELENLL 470
Query: 1232 RKV 1240
+V
Sbjct: 471 ERV 473