BLASTX nr result

ID: Panax21_contig00008989 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008989
         (893 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520646.1| conserved hypothetical protein [Ricinus comm...    57   8e-06
ref|XP_002310987.1| predicted protein [Populus trichocarpa] gi|2...    57   8e-06

>ref|XP_002520646.1| conserved hypothetical protein [Ricinus communis]
           gi|223540166|gb|EEF41742.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 397

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 55/221 (24%), Positives = 91/221 (41%), Gaps = 20/221 (9%)
 Frame = -1

Query: 608 VPIKCRTRLKSVSKKWRNFIGHLRLSSPLTTSSGLVIFLKGIHNNPILHSTNFIQIRDHT 429
           +P+K   + K VSK+W + I     S   T        L+  ++ P     N    R + 
Sbjct: 30  LPVKTLLKFKCVSKQWNSLISSSYFSISHTR-------LRCTYSTPAALLLNKGSTRFYV 82

Query: 428 LAQNATLNSSFLHNFPW-------LVDSCNGLLLYGTT---DDNYF--WTYHVSSPF--- 294
           +  N+    +F H F +       ++ SCNGLLL  ++   D N    + Y V +P    
Sbjct: 83  IYLNSFTRGNFAHFFEFFKGSQLQILQSCNGLLLCRSSMLKDHNLIGGFVYFVCNPTTKQ 142

Query: 293 ---LNHPIALPRAHQVSRSASASLIFDGSSYDQFRVICFFRDEVNFAAKTVKYMVFSSKN 123
              + +P++L +  +     S SL FD      ++++  F    N     V+  V+SSKN
Sbjct: 143 SKRICYPVSLEQKFKTRYLMSVSLAFDPKMSPHYKIVFIFELRKNKETHVVETYVYSSKN 202

Query: 122 WEW--REYEARILNSDLMQEDGFVPGHCFRPSVYCRRKLYW 6
             W  R  +   L  +L+       G  FR  VY    ++W
Sbjct: 203 DSWVSRREDVTELCMNLVPPPTL--GIGFRDGVYANAAIHW 241


>ref|XP_002310987.1| predicted protein [Populus trichocarpa] gi|222850807|gb|EEE88354.1|
           predicted protein [Populus trichocarpa]
          Length = 396

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 54/183 (29%), Positives = 76/183 (41%), Gaps = 18/183 (9%)
 Frame = -1

Query: 608 VPIKCRT-------RLKSVSKKWRNFIGH-----LRLSSPLTTSSGLVIFLKGI-HNNPI 468
           V I CR        RLKSV K W N I       +  SSPL    G +   K I    P 
Sbjct: 31  VEILCRVTDRKHLIRLKSVCKSWNNLITDACVPKISASSPL---HGFIYLAKKIGFGKPY 87

Query: 467 LHS-----TNFIQIRDHTLAQNATLNSSFLHNFPWLVDSCNGLLLYGTTDDNYFWTYHVS 303
           +       T  +    H   ++ +    F       +D CNGLLL+    +     Y+V 
Sbjct: 88  IDYIPCAITPAVAPEPHEFVKSYSSLLPFEPARGDFLDCCNGLLLFV---EGCTLQYYVC 144

Query: 302 SPFLNHPIALPRAHQVSRSASASLIFDGSSYDQFRVICFFRDEVNFAAKTVKYMVFSSKN 123
           +P   H +A+PR   +     A+L FD S+   +RV+CF   E   +   V+  VFSS+ 
Sbjct: 145 NPATKHCVAIPRDFMLENIIFAALAFDPSTSPHYRVVCFDYSE---SRPPVRLQVFSSET 201

Query: 122 WEW 114
             W
Sbjct: 202 GNW 204


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