BLASTX nr result

ID: Panax21_contig00008974 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008974
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_179558.1| F-type H+-transporting ATPase subunit g [Arabid...   100   1e-19
ref|XP_002514162.1| hydrogen-transporting ATP synthase, rotation...    98   6e-19
ref|XP_002867404.1| mitochondrial ATP synthase g subunit family ...    97   1e-18
ref|NP_194677.1| ATP synthase subunit G protein [Arabidopsis tha...    97   1e-18
ref|XP_002886028.1| mitochondrial ATP synthase g subunit family ...    97   2e-18

>ref|NP_179558.1| F-type H+-transporting ATPase subunit g [Arabidopsis thaliana]
           gi|145329180|ref|NP_001077919.1| F-type H+-transporting
           ATPase subunit g [Arabidopsis thaliana]
           gi|13899095|gb|AAK48969.1|AF370542_1 copia-like
           retroelement pol polyprotein [Arabidopsis thaliana]
           gi|3687249|gb|AAC62147.1| copia-like retroelement pol
           polyprotein [Arabidopsis thaliana]
           gi|18377532|gb|AAL66932.1| copia-like retroelement pol
           polyprotein [Arabidopsis thaliana]
           gi|21553484|gb|AAM62577.1| copia-like retroelement pol
           polyprotein [Arabidopsis thaliana]
           gi|330251817|gb|AEC06911.1| F-type H+-transporting
           ATPase subunit g [Arabidopsis thaliana]
           gi|330251818|gb|AEC06912.1| F-type H+-transporting
           ATPase subunit g [Arabidopsis thaliana]
          Length = 122

 Score =  100 bits (249), Expect = 1e-19
 Identities = 48/53 (90%), Positives = 52/53 (98%)
 Frame = -3

Query: 159 MASKLVQLQSKACKASQFVAKHGTSYYKQLLEQNKQYIQEPATVEKCSELSKK 1
           MASKLVQLQSKAC+AS+FVAKHG SYYKQLLEQNKQYIQEPAT+EKCSELSK+
Sbjct: 1   MASKLVQLQSKACQASKFVAKHGNSYYKQLLEQNKQYIQEPATIEKCSELSKQ 53


>ref|XP_002514162.1| hydrogen-transporting ATP synthase, rotational mechanism, putative
           [Ricinus communis] gi|223546618|gb|EEF48116.1|
           hydrogen-transporting ATP synthase, rotational
           mechanism, putative [Ricinus communis]
          Length = 122

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 47/53 (88%), Positives = 52/53 (98%)
 Frame = -3

Query: 159 MASKLVQLQSKACKASQFVAKHGTSYYKQLLEQNKQYIQEPATVEKCSELSKK 1
           MASKL QLQSKAC+ASQFVAKHGT+YYKQLLEQNKQYIQ+PATVEKC+ELSK+
Sbjct: 1   MASKLHQLQSKACQASQFVAKHGTAYYKQLLEQNKQYIQQPATVEKCNELSKQ 53


>ref|XP_002867404.1| mitochondrial ATP synthase g subunit family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297313240|gb|EFH43663.1|
           mitochondrial ATP synthase g subunit family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 122

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 45/53 (84%), Positives = 52/53 (98%)
 Frame = -3

Query: 159 MASKLVQLQSKACKASQFVAKHGTSYYKQLLEQNKQYIQEPATVEKCSELSKK 1
           MASKL+Q+QSKAC+AS+FVAKHGTSYY+QLLE+NKQYIQEPATVEKC ELSK+
Sbjct: 1   MASKLIQVQSKACEASKFVAKHGTSYYRQLLEKNKQYIQEPATVEKCQELSKQ 53


>ref|NP_194677.1| ATP synthase subunit G protein [Arabidopsis thaliana]
           gi|11908084|gb|AAG41471.1|AF326889_1 unknown protein
           [Arabidopsis thaliana]
           gi|12642892|gb|AAK00388.1|AF339706_1 unknown protein
           [Arabidopsis thaliana] gi|7269847|emb|CAB79706.1|
           putative protein [Arabidopsis thaliana]
           gi|14517504|gb|AAK62642.1| AT4g29480/F17A13_300
           [Arabidopsis thaliana] gi|15809754|gb|AAL06805.1|
           AT4g29480/F17A13_300 [Arabidopsis thaliana]
           gi|21594744|gb|AAM66039.1| copia-like retroelement pol
           polyprotein [Arabidopsis thaliana]
           gi|332660236|gb|AEE85636.1| ATP synthase subunit G
           protein [Arabidopsis thaliana]
          Length = 122

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 45/53 (84%), Positives = 52/53 (98%)
 Frame = -3

Query: 159 MASKLVQLQSKACKASQFVAKHGTSYYKQLLEQNKQYIQEPATVEKCSELSKK 1
           MASKL+Q+QSKAC+AS+FVAKHGTSYY+QLLE+NKQYIQEPATVEKC ELSK+
Sbjct: 1   MASKLIQVQSKACEASKFVAKHGTSYYRQLLEKNKQYIQEPATVEKCQELSKQ 53


>ref|XP_002886028.1| mitochondrial ATP synthase g subunit family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297331868|gb|EFH62287.1|
           mitochondrial ATP synthase g subunit family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 122

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 48/53 (90%), Positives = 51/53 (96%)
 Frame = -3

Query: 159 MASKLVQLQSKACKASQFVAKHGTSYYKQLLEQNKQYIQEPATVEKCSELSKK 1
           MASKLVQLQSKA +AS+FVAKHG SYYKQLLEQNKQYIQEPATVEKCSELSK+
Sbjct: 1   MASKLVQLQSKAYQASKFVAKHGNSYYKQLLEQNKQYIQEPATVEKCSELSKQ 53


Top