BLASTX nr result
ID: Panax21_contig00008961
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00008961 (820 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002513525.1| nucleic acid binding protein, putative [Rici... 121 2e-25 ref|XP_002313352.1| predicted protein [Populus trichocarpa] gi|2... 120 3e-25 emb|CAN62156.1| hypothetical protein VITISV_021251 [Vitis vinifera] 119 8e-25 ref|XP_002274487.1| PREDICTED: zinc finger CCCH domain-containin... 117 4e-24 ref|XP_002298292.1| predicted protein [Populus trichocarpa] gi|2... 117 4e-24 >ref|XP_002513525.1| nucleic acid binding protein, putative [Ricinus communis] gi|223547433|gb|EEF48928.1| nucleic acid binding protein, putative [Ricinus communis] Length = 700 Score = 121 bits (303), Expect = 2e-25 Identities = 99/272 (36%), Positives = 124/272 (45%), Gaps = 42/272 (15%) Frame = -2 Query: 690 MDNNEATSTVMLRIQGLDPENACKIMGYILIHDPGEKEMIRLALGPETQLINLINQAKAX 511 MD+ EAT V RIQ LDPENA KIMG +L+ D G+KEMIRLA GPET L NLI QAK Sbjct: 1 MDSYEATKMVFSRIQSLDPENASKIMGCLLLQDHGDKEMIRLAFGPETLLHNLILQAKTH 60 Query: 510 XXXXXXXXXXXXXXXXXXXXLHRLPVFPQP------APRIIIPNNGFNM-NPSSPSS-PW 355 P +P + RI NNGF++ NPSSPSS W Sbjct: 61 LGFSSNTPSTPSTPSSPSPFN---PTSSRPSSLSISSSRITSNNNGFDITNPSSPSSNSW 117 Query: 354 AQMSP---KPVSYAAVVNGTGTSPN-----------------PSFSHPFCNNTAGNE--- 244 +SP +SYA++VNGT + + P ++ NN N+ Sbjct: 118 PLLSPNTTSSLSYASIVNGTSNNNSNTGSSSLSSTMSLSNAFPYYNSNSTNNNTSNDLID 177 Query: 243 -------FSEVFETKNLDFMDP----IMSPGGRSDSVLFPYGNCNENHHHNPHRRSVSVS 97 FS + ++K + DP MSP D+ L HRRS SV Sbjct: 178 EYQLQDHFSFLNDSKTDELFDPRLDLAMSPTAYGDTHL--------------HRRSFSVP 223 Query: 96 DVFLXXXXXXXXXXXGWRPCMYFNRGFCKNGS 1 L GW+PC+YF RGFCKNG+ Sbjct: 224 G--LCFGSEDANSGLGWKPCLYFARGFCKNGT 253 >ref|XP_002313352.1| predicted protein [Populus trichocarpa] gi|222849760|gb|EEE87307.1| predicted protein [Populus trichocarpa] Length = 685 Score = 120 bits (302), Expect = 3e-25 Identities = 98/260 (37%), Positives = 121/260 (46%), Gaps = 30/260 (11%) Frame = -2 Query: 690 MDNNEATSTVMLRIQGLDPENACKIMGYILIHDPGEKEMIRLALGPETQLINLINQAKAX 511 MD+ EAT+ V RIQ L+PENA KIMGY+L+ D GEKEMIRLA GPET L NLI Q K Sbjct: 1 MDSYEATNIVFSRIQSLEPENASKIMGYLLLQDYGEKEMIRLAFGPETLLQNLILQTKTQ 60 Query: 510 XXXXXXXXXXXXXXXXXXXXLHRLPVFPQPAPRIIIPNNGFNM-NPSSPS-SPWAQMSPK 337 L + P NNGF++ N SSPS + W +SP Sbjct: 61 LGFPSNTPSTPSPAFIPSSRPSPLYISSSRIPN----NNGFDITNSSSPSTNSWPLLSPN 116 Query: 336 ---PVSYAAVVNG--------TGTSPNPSFSHPFC---NNTAGNE----------FSEVF 229 +SYA+VVNG T P S S F NN N+ FS + Sbjct: 117 STTSLSYASVVNGASNINAGSTPFQPTVSLSKAFSYSNNNDNANDLVDEYELQERFSFLN 176 Query: 228 ETKNLDFMDP----IMSPGGRSDSVLFPYGNCNENHHHNPHRRSVSVSDVFLXXXXXXXX 61 ++K D DP MSP D+ L H+RS SV + Sbjct: 177 DSKTDDLFDPRGELAMSPPAFGDNSL--------------HKRSFSVPG--MCFGSEDSN 220 Query: 60 XXXGWRPCMYFNRGFCKNGS 1 GW+PC+YF+RGFCKNG+ Sbjct: 221 SGFGWKPCLYFSRGFCKNGT 240 >emb|CAN62156.1| hypothetical protein VITISV_021251 [Vitis vinifera] Length = 697 Score = 119 bits (298), Expect = 8e-25 Identities = 98/252 (38%), Positives = 116/252 (46%), Gaps = 22/252 (8%) Frame = -2 Query: 690 MDNNEATSTVMLRIQGLDPENACKIMGYI-LIHDPGEKEMIRLALGPETQLINLINQAKA 514 MD+ EAT V RIQ LDPENA KIMGYI LI D GEKEMIRLA GPET L NLI +AK Sbjct: 1 MDSYEATRIVFSRIQALDPENASKIMGYILLIQDHGEKEMIRLAFGPETLLHNLILKAKT 60 Query: 513 XXXXXXXXXXXXXXXXXXXXXLHRLPVFPQPAPRIIIPNNGFNMNPSSPSSPWAQM-SPK 337 P P P + NNGFN + S P S ++ + SP Sbjct: 61 QLGILSNTPSTPTSPS---------PFNPISKPTRLPTNNGFNPSSSWPVSGFSDLRSPN 111 Query: 336 ----PVSYAAVVNGT------GTSPNPSFSHPFCNNTAGNEFSEVFETKN---------- 217 +SYAAVVNG GT + S P+ NN +G+ S V N Sbjct: 112 STTAQLSYAAVVNGATNVSDLGTVSSSPASIPYYNNCSGSNNSSVVCNDNVMDDYQLQDH 171 Query: 216 LDFMDPIMSPGGRSDSVLFPYGNCNENHHHNPHRRSVSVSDVFLXXXXXXXXXXXGWRPC 37 L F++ P D L HRRS S +D GW+PC Sbjct: 172 LSFLNDASKPEDLFDPRL-ELAMSPSFGETQLHRRSYSFNDA--CYGSDDGASGFGWKPC 228 Query: 36 MYFNRGFCKNGS 1 +YF RGFCKNG+ Sbjct: 229 LYFARGFCKNGN 240 >ref|XP_002274487.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like [Vitis vinifera] Length = 695 Score = 117 bits (292), Expect = 4e-24 Identities = 97/252 (38%), Positives = 115/252 (45%), Gaps = 22/252 (8%) Frame = -2 Query: 690 MDNNEATSTVMLRIQGLDPENACKIMGYI-LIHDPGEKEMIRLALGPETQLINLINQAKA 514 MD+ EAT V RIQ LDPENA KIMGYI LI D GEKEMIRLA GPET L NLI +AK Sbjct: 1 MDSYEATRIVFSRIQALDPENASKIMGYILLIQDHGEKEMIRLAFGPETLLHNLILKAKT 60 Query: 513 XXXXXXXXXXXXXXXXXXXXXLHRLPVFPQPAPRIIIPNNGFNMNPSSPSSPWAQM-SPK 337 P P P + NNGFN + S P S ++ + SP Sbjct: 61 QLGILSNTPSTPTSPS---------PFNPISKPTRLPTNNGFNPSSSWPVSGFSDLRSPN 111 Query: 336 ----PVSYAAVVNGT------GTSPNPSFSHPFCNNTAGNEFSEVFETKN---------- 217 +SYAAVVNG GT + S P+ NN + + S V N Sbjct: 112 STTAQLSYAAVVNGATNVSDLGTVSSSPASIPYYNNCSSSNNSSVVCNDNVMDDYQLQDH 171 Query: 216 LDFMDPIMSPGGRSDSVLFPYGNCNENHHHNPHRRSVSVSDVFLXXXXXXXXXXXGWRPC 37 L F++ P D L HRRS S +D GW+PC Sbjct: 172 LSFLNDASKPEDLFDPRL-ELAMSPSFGETQLHRRSYSFNDA--CYGSDDGASGFGWKPC 228 Query: 36 MYFNRGFCKNGS 1 +YF RGFCKNG+ Sbjct: 229 LYFARGFCKNGN 240 >ref|XP_002298292.1| predicted protein [Populus trichocarpa] gi|222845550|gb|EEE83097.1| predicted protein [Populus trichocarpa] Length = 428 Score = 117 bits (292), Expect = 4e-24 Identities = 91/247 (36%), Positives = 111/247 (44%), Gaps = 17/247 (6%) Frame = -2 Query: 690 MDNNEATSTVMLRIQGLDPENACKIMGYILIHDPGEKEMIRLALGPETQLINLINQAKAX 511 MD+ EA + V RIQ L+PENA KIMGY+L+ D GEKEMIR A GPET L NLI AK Sbjct: 1 MDSYEAANMVFSRIQNLEPENASKIMGYLLLQDYGEKEMIRFAFGPETLLHNLILYAKTQ 60 Query: 510 XXXXXXXXXXXXXXXXXXXXLHRLPVFPQPAPR-IIIP------NNGFNM-NPSSPS-SP 358 P P P + IP NNGF++ NPSSPS + Sbjct: 61 LGFLSNKTSSS-------------PFIPSSRPSPLSIPSSRITNNNGFDITNPSSPSTNS 107 Query: 357 WAQMSP---KPVSYAAVVNGTGTSPNPSFSHPFCNNTAGNEFSEVFETKNLDFMDPIMSP 187 W +P P+SYA+VVNG + N + F N Sbjct: 108 WHFSTPNSTSPLSYASVVNGASSI-----------NASSTPFQPTVSLSN---------- 146 Query: 186 GGRSDSVLFPYGNCNENH-----HHNPHRRSVSVSDVFLXXXXXXXXXXXGWRPCMYFNR 22 FPY N N + H+RS SV D + GW+PC+YF+R Sbjct: 147 -------AFPYSNNNTTSPTKYGDNGSHKRSFSVPDTCV--GSEDSNSGFGWKPCLYFSR 197 Query: 21 GFCKNGS 1 GFCKNGS Sbjct: 198 GFCKNGS 204