BLASTX nr result

ID: Panax21_contig00008951 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008951
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278875.2| PREDICTED: reticulon-like protein B1 isoform...   200   9e-50
ref|XP_003633964.1| PREDICTED: reticulon-like protein B1 isoform...   200   9e-50
ref|NP_001239653.1| uncharacterized protein LOC100793862 [Glycin...   199   2e-49
ref|XP_002277080.2| PREDICTED: uncharacterized protein LOC100267...   199   3e-49
emb|CBI34409.3| unnamed protein product [Vitis vinifera]              199   3e-49

>ref|XP_002278875.2| PREDICTED: reticulon-like protein B1 isoform 1 [Vitis vinifera]
          Length = 281

 Score =  200 bits (509), Expect = 9e-50
 Identities = 99/125 (79%), Positives = 111/125 (88%)
 Frame = -2

Query: 377 ASVLGGASVIWVLFELLGYHLISLVCHISILTLAILFLWSNASTFINKSPPRIPEVHLPE 198
           A VLGGA+ +WVLFELL YHL++LVCHI IL+LAILFLWSNA+TFINKSPPRIPEVH+PE
Sbjct: 108 AGVLGGATAMWVLFELLEYHLLTLVCHILILSLAILFLWSNATTFINKSPPRIPEVHIPE 167

Query: 197 GPFLQVASASRIEINRALAVLREIASGRDLKKFLAIIAGLGVLSVVGSWCDFLTLFYITF 18
            PFLQ  +A RIEIN   AVLR+IASGRDLKKFL IIAGL VLS++GS C+FLTLFYITF
Sbjct: 168 DPFLQAVNALRIEINCGFAVLRDIASGRDLKKFLIIIAGLWVLSILGSCCNFLTLFYITF 227

Query: 17  VLLHT 3
           VLLHT
Sbjct: 228 VLLHT 232


>ref|XP_003633964.1| PREDICTED: reticulon-like protein B1 isoform 2 [Vitis vinifera]
           gi|359489678|ref|XP_003633965.1| PREDICTED:
           reticulon-like protein B1 isoform 3 [Vitis vinifera]
           gi|297745364|emb|CBI40444.3| unnamed protein product
           [Vitis vinifera]
          Length = 255

 Score =  200 bits (509), Expect = 9e-50
 Identities = 99/125 (79%), Positives = 111/125 (88%)
 Frame = -2

Query: 377 ASVLGGASVIWVLFELLGYHLISLVCHISILTLAILFLWSNASTFINKSPPRIPEVHLPE 198
           A VLGGA+ +WVLFELL YHL++LVCHI IL+LAILFLWSNA+TFINKSPPRIPEVH+PE
Sbjct: 82  AGVLGGATAMWVLFELLEYHLLTLVCHILILSLAILFLWSNATTFINKSPPRIPEVHIPE 141

Query: 197 GPFLQVASASRIEINRALAVLREIASGRDLKKFLAIIAGLGVLSVVGSWCDFLTLFYITF 18
            PFLQ  +A RIEIN   AVLR+IASGRDLKKFL IIAGL VLS++GS C+FLTLFYITF
Sbjct: 142 DPFLQAVNALRIEINCGFAVLRDIASGRDLKKFLIIIAGLWVLSILGSCCNFLTLFYITF 201

Query: 17  VLLHT 3
           VLLHT
Sbjct: 202 VLLHT 206


>ref|NP_001239653.1| uncharacterized protein LOC100793862 [Glycine max]
           gi|255641693|gb|ACU21118.1| unknown [Glycine max]
          Length = 257

 Score =  199 bits (507), Expect = 2e-49
 Identities = 96/125 (76%), Positives = 108/125 (86%)
 Frame = -2

Query: 377 ASVLGGASVIWVLFELLGYHLISLVCHISILTLAILFLWSNASTFINKSPPRIPEVHLPE 198
           A VLGGA+ +WVLFELL YHL++LVCHI IL LA+LFLWSNA TFI+KSPPRIPEVHLPE
Sbjct: 85  AGVLGGATAVWVLFELLEYHLLTLVCHILILLLAVLFLWSNAHTFIHKSPPRIPEVHLPE 144

Query: 197 GPFLQVASASRIEINRALAVLREIASGRDLKKFLAIIAGLGVLSVVGSWCDFLTLFYITF 18
            PF QVASA RIEINR  A+L  I SGRDLKKFL IIAG+ +LS+VG+WC+FLTLFYITF
Sbjct: 145 EPFQQVASALRIEINRGFAILHSIGSGRDLKKFLVIIAGVWILSIVGNWCNFLTLFYITF 204

Query: 17  VLLHT 3
           VL HT
Sbjct: 205 VLSHT 209


>ref|XP_002277080.2| PREDICTED: uncharacterized protein LOC100267262 [Vitis vinifera]
          Length = 256

 Score =  199 bits (505), Expect = 3e-49
 Identities = 93/125 (74%), Positives = 109/125 (87%)
 Frame = -2

Query: 377 ASVLGGASVIWVLFELLGYHLISLVCHISILTLAILFLWSNASTFINKSPPRIPEVHLPE 198
           A VLGGA+ +W+LFELL YHL++LVCH SIL LAILFLWSNA+TFINK+PP IPEVH+PE
Sbjct: 83  AGVLGGATAVWILFELLEYHLLTLVCHCSILALAILFLWSNATTFINKAPPHIPEVHIPE 142

Query: 197 GPFLQVASASRIEINRALAVLREIASGRDLKKFLAIIAGLGVLSVVGSWCDFLTLFYITF 18
            P LQ ASA RIEINR   +LR +ASG+DLKKFL++IAGL V+S+VGSWC+FLTLFYI F
Sbjct: 143 DPVLQFASALRIEINRGFTLLRNVASGKDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVF 202

Query: 17  VLLHT 3
           VLLHT
Sbjct: 203 VLLHT 207


>emb|CBI34409.3| unnamed protein product [Vitis vinifera]
          Length = 252

 Score =  199 bits (505), Expect = 3e-49
 Identities = 93/125 (74%), Positives = 109/125 (87%)
 Frame = -2

Query: 377 ASVLGGASVIWVLFELLGYHLISLVCHISILTLAILFLWSNASTFINKSPPRIPEVHLPE 198
           A VLGGA+ +W+LFELL YHL++LVCH SIL LAILFLWSNA+TFINK+PP IPEVH+PE
Sbjct: 79  AGVLGGATAVWILFELLEYHLLTLVCHCSILALAILFLWSNATTFINKAPPHIPEVHIPE 138

Query: 197 GPFLQVASASRIEINRALAVLREIASGRDLKKFLAIIAGLGVLSVVGSWCDFLTLFYITF 18
            P LQ ASA RIEINR   +LR +ASG+DLKKFL++IAGL V+S+VGSWC+FLTLFYI F
Sbjct: 139 DPVLQFASALRIEINRGFTLLRNVASGKDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVF 198

Query: 17  VLLHT 3
           VLLHT
Sbjct: 199 VLLHT 203


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