BLASTX nr result
ID: Panax21_contig00008935
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00008935
(1573 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF24529.1|AC007534_10 F7F22.15 [Arabidopsis thaliana] 535 e-167
dbj|BAB10790.1| retroelement pol polyprotein-like [Arabidopsis t... 528 e-166
gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis] 514 e-162
emb|CAN61136.1| hypothetical protein VITISV_023515 [Vitis vinifera] 513 e-160
emb|CAN76969.1| hypothetical protein VITISV_029689 [Vitis vinifera] 512 e-160
>gb|AAF24529.1|AC007534_10 F7F22.15 [Arabidopsis thaliana]
Length = 1862
Score = 535 bits (1377), Expect(3) = e-167
Identities = 260/450 (57%), Positives = 325/450 (72%), Gaps = 18/450 (4%)
Frame = +3
Query: 171 ILRRCVETNLVLNWEKCHFMVQEGIILGHKVSKKGLEVDIAILETIKNFLPPTSVKGVRS 350
+L RC ETNLVLNWEKCHFMV+EGI+LGHK+S+KG+EVD +E + PP +VK +RS
Sbjct: 1149 VLTRCEETNLVLNWEKCHFMVKEGIVLGHKISEKGIEVDKGKVEVMMQLQPPKTVKDIRS 1208
Query: 351 FLGHVGFYRRFIKDFSKITKPLCSLLENDAQFKFDEDCVSAFEHLKRKLTSAPVITALDW 530
FLGH GFYRRFIKDFSKI +PL LL + +FKFD+DC+ +F+ +K L SAPV+ A +W
Sbjct: 1209 FLGHAGFYRRFIKDFSKIARPLTRLLCKETEFKFDDDCLKSFQTIKDALVSAPVVRAPNW 1268
Query: 531 DLPFELMCDASDYAVGAVLGQRKEKIFYVIYYASMTLTDAQLNYTTTEKELLAFVYAFDM 710
D PFE+MCDASDYAVGAVLGQ+ +K +VIYYAS TL DAQ Y TTEKELLA V+AF+
Sbjct: 1269 DYPFEIMCDASDYAVGAVLGQKIDKKLHVIYYASRTLDDAQGRYATTEKELLAVVFAFEK 1328
Query: 711 FRAYLIDTRVIVYTDHAAIRHLVA*KDAKPCLIRWILLLQEFDLEIKDRKGTENQVADHL 890
FR+YL+ ++V VYTDHAA+RHL A KD KP L+RWILLLQEFD+EI D+KG EN ADHL
Sbjct: 1329 FRSYLVGSKVTVYTDHAALRHLYAKKDTKPRLLRWILLLQEFDMEIVDKKGIENGAADHL 1388
Query: 891 SRLENPRREVDDKIVINESFPNEQFFV------------------VKGEVS*FADYANYL 1016
SR+ +++ ++I++S P EQ V V+GE +AD+ NYL
Sbjct: 1389 SRM-----RIEEPLLIDDSMPEEQLMVVEFFGKSYSGKEFHQLNAVEGESPWYADHVNYL 1443
Query: 1017 VSRMVPSDLVGHQKRKFLHDVKWLIWDEPYLFKQCADQMIRRCIPYSETEGILQDCHASL 1196
+ P +L ++++KF D+ WDEPYL+ C D++ RRC+ E EGIL CH S
Sbjct: 1444 ACGVEPPNLTSYERKKFFRDIHHYYWDEPYLYTLCKDKIYRRCVSEDEVEGILLHCHGSA 1503
Query: 1197 YGGHHGGERTTARVLQAGFYWPTIFKDAYIFVQTCDRC*RVGNILKRNEMPLNTILEVEI 1376
YGGH +T +++LQAGF+WPT+FKDA FV CD C R GNI +RNEMP N ILEVEI
Sbjct: 1504 YGGHFATFKTVSKILQAGFWWPTMFKDAQEFVSKCDSCQRKGNISRRNEMPQNPILEVEI 1563
Query: 1377 FYVWGIDFMGPFIFSCGNLYLLLAVDYVSK 1466
F VWGIDFMGPF S GN Y+L+AVDYVSK
Sbjct: 1564 FDVWGIDFMGPFPSSYGNKYILVAVDYVSK 1593
Score = 82.4 bits (202), Expect(3) = e-167
Identities = 37/54 (68%), Positives = 44/54 (81%)
Frame = +1
Query: 1 TFAFRRMSFGLCNAPATF*RCMMAIFSDMVENNVEVFMDDFLVFGDSFDLCLKN 162
TFA++RM FGLCNAPATF RCM +IFSD+++ VEVFMDDF V+G SF CL N
Sbjct: 1092 TFAYKRMPFGLCNAPATFQRCMTSIFSDLIKEMVEVFMDDFSVYGPSFSSCLLN 1145
Score = 22.7 bits (47), Expect(3) = e-167
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +2
Query: 1466 VDYVSKWVD 1492
VDYVSKWV+
Sbjct: 1588 VDYVSKWVE 1596
>dbj|BAB10790.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1864
Score = 528 bits (1360), Expect(3) = e-166
Identities = 253/454 (55%), Positives = 330/454 (72%), Gaps = 19/454 (4%)
Frame = +3
Query: 162 LVMILRRCVETNLVLNWEKCHFMVQEGIILGHKVSKKGLEVDIAILETIKNFLPPTSVKG 341
L +L+RC ETNLVLNWEKCHFMV+EGI+LGHK+S++G+EVD A ++ + PP +VK
Sbjct: 1147 LCRVLKRCEETNLVLNWEKCHFMVREGIVLGHKISEEGIEVDKAKVDVMMQLQPPKTVKD 1206
Query: 342 VRSFLGHVGFYRRFIKDFSKITKPLCSLLENDAQFKFDEDCVSAFEHLKRKLTSAPVITA 521
+RSFLGH GFYRRFIKDFSK+ +PL LL + +F FD++C++AF+ +K L +AP++ A
Sbjct: 1207 IRSFLGHAGFYRRFIKDFSKLARPLTRLLCKETEFAFDDECLTAFKLIKEALITAPIVQA 1266
Query: 522 LDWDLPFELMCDASDYAVGAVLGQRKEKIFYVIYYASMTLTDAQLNYTTTEKELLAFVYA 701
+WD PFE+MC+ASDYAVGAVLGQR +K +VIYYAS T+ DAQ+ Y TTEKELLA V+A
Sbjct: 1267 PNWDFPFEIMCNASDYAVGAVLGQRIDKKLHVIYYASRTMDDAQVRYATTEKELLAVVFA 1326
Query: 702 FDMFRAYLIDTRVIVYTDHAAIRHLVA*KDAKPCLIRWILLLQEFDLEIKDRKGTENQVA 881
F+ FR+YL+ ++V VYTDHAA+RH+ A KD KP L+RWILLLQEFD+EI D+KG EN VA
Sbjct: 1327 FEKFRSYLVGSKVTVYTDHAALRHIYAKKDTKPRLLRWILLLQEFDMEIVDKKGIENGVA 1386
Query: 882 DHLSRLENPRREVDDKIVINESFPNEQFF-------------------VVKGEVS*FADY 1004
DHLSR+ ++D++ I++S P EQ ++ ++ +AD+
Sbjct: 1387 DHLSRM-----RIEDEVPIDDSMPEEQLMAIQQLNESAQIRKSLDQVCTIEEKLPWYADH 1441
Query: 1005 ANYLVSRMVPSDLVGHQKRKFLHDVKWLIWDEPYLFKQCADQMIRRCIPYSETEGILQDC 1184
NYLVS P +L ++K+KF D+ WDEPYL+ C D++ RRC+ E EGIL C
Sbjct: 1442 VNYLVSGEEPPNLSSYEKKKFFKDINHFYWDEPYLYTLCKDKIYRRCVSEDEIEGILLHC 1501
Query: 1185 HASLYGGHHGGERTTARVLQAGFYWPTIFKDAYIFVQTCDRC*RVGNILKRNEMPLNTIL 1364
H S YGGH +T +++LQAGF+WP++FKDA F+ CD C R GNI +RNEMP N IL
Sbjct: 1502 HGSAYGGHFATFKTVSKILQAGFWWPSMFKDAQEFISKCDSCQRRGNISRRNEMPQNPIL 1561
Query: 1365 EVEIFYVWGIDFMGPFIFSCGNLYLLLAVDYVSK 1466
EVEIF VWGIDFMGPF S GN Y+L+AVDYVSK
Sbjct: 1562 EVEIFDVWGIDFMGPFPSSYGNKYILVAVDYVSK 1595
Score = 84.3 bits (207), Expect(3) = e-166
Identities = 38/54 (70%), Positives = 44/54 (81%)
Frame = +1
Query: 1 TFAFRRMSFGLCNAPATF*RCMMAIFSDMVENNVEVFMDDFLVFGDSFDLCLKN 162
TFA++RM FGLCNAPATF RCM +IFSD++E VEVFMDDF V+G SF CL N
Sbjct: 1093 TFAYKRMPFGLCNAPATFQRCMTSIFSDLIEEMVEVFMDDFSVYGSSFSSCLLN 1146
Score = 22.7 bits (47), Expect(3) = e-166
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +2
Query: 1466 VDYVSKWVD 1492
VDYVSKWV+
Sbjct: 1590 VDYVSKWVE 1598
>gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]
Length = 1788
Score = 514 bits (1325), Expect(2) = e-162
Identities = 250/435 (57%), Positives = 315/435 (72%)
Frame = +3
Query: 162 LVMILRRCVETNLVLNWEKCHFMVQEGIILGHKVSKKGLEVDIAILETIKNFLPPTSVKG 341
L ++L RC E NL LNWEKCHFMV++GI+LGH VS +G+EVD A ++ I N PP +VK
Sbjct: 1022 LKLVLERCREKNLTLNWEKCHFMVKQGIVLGHVVSNRGIEVDKAKVDIISNLPPPKTVKD 1081
Query: 342 VRSFLGHVGFYRRFIKDFSKITKPLCSLLENDAQFKFDEDCVSAFEHLKRKLTSAPVITA 521
VRSFLGH GFYRRFIKDFSKI +PL +LL D F F DC+ AFE+LK++LT+AP+I A
Sbjct: 1082 VRSFLGHAGFYRRFIKDFSKIARPLTNLLAKDTSFVFSPDCLKAFEYLKKELTTAPIIHA 1141
Query: 522 LDWDLPFELMCDASDYAVGAVLGQRKEKIFYVIYYASMTLTDAQLNYTTTEKELLAFVYA 701
DW LPFELMCDASD A+GAVLGQR + +VIYYAS TL DAQ NY+ TEKE LA V+A
Sbjct: 1142 PDWTLPFELMCDASDSAIGAVLGQRFDGKPHVIYYASRTLNDAQQNYSVTEKEFLAVVFA 1201
Query: 702 FDMFRAYLIDTRVIVYTDHAAIRHLVA*KDAKPCLIRWILLLQEFDLEIKDRKGTENQVA 881
+ FR+YLI + V+ DHAA+++L+ KDAK LIRWILLLQEFD++I DR+GTEN VA
Sbjct: 1202 LEKFRSYLIGSLTKVFNDHAALKYLLTKKDAKARLIRWILLLQEFDIQILDRRGTENPVA 1261
Query: 882 DHLSRLENPRREVDDKIVINESFPNEQFFVVKGEVS*FADYANYLVSRMVPSDLVGHQKR 1061
DHLSRL N + INE FP+EQ ++ V FAD NY+V +PS +
Sbjct: 1262 DHLSRLPNAPTST---VPINEHFPDEQLLEIQ-SVPWFADIVNYIVMNQIPSHWSKQDRS 1317
Query: 1062 KFLHDVKWLIWDEPYLFKQCADQMIRRCIPYSETEGILQDCHASLYGGHHGGERTTARVL 1241
+FL VK+ WD+PYLFK C DQ+ RRC+P ET +L CH GGH G +T +VL
Sbjct: 1318 RFLSQVKYFYWDDPYLFKYCPDQIFRRCVPTEETRSVLSFCHEQACGGHFGPRKTAEKVL 1377
Query: 1242 QAGFYWPTIFKDAYIFVQTCDRC*RVGNILKRNEMPLNTILEVEIFYVWGIDFMGPFIFS 1421
Q+G YWPT+FKD++ F +TC+RC +G + +RN MPL IL VE+F +WGIDFMGPF S
Sbjct: 1378 QSGLYWPTLFKDSFEFCKTCNRCQLLGKVTRRNMMPLQPILSVELFDLWGIDFMGPFPNS 1437
Query: 1422 CGNLYLLLAVDYVSK 1466
GN+Y+L+AV+Y+SK
Sbjct: 1438 FGNVYILVAVEYMSK 1452
Score = 86.3 bits (212), Expect(2) = e-162
Identities = 38/52 (73%), Positives = 45/52 (86%)
Frame = +1
Query: 1 TFAFRRMSFGLCNAPATF*RCMMAIFSDMVENNVEVFMDDFLVFGDSFDLCL 156
TFA+RRM FGLCNAPATF RCM++IFSDMVE +E+FMDDF +FGD+F CL
Sbjct: 968 TFAYRRMPFGLCNAPATFQRCMISIFSDMVERFLEIFMDDFSIFGDTFSQCL 1019
>emb|CAN61136.1| hypothetical protein VITISV_023515 [Vitis vinifera]
Length = 1831
Score = 513 bits (1320), Expect(2) = e-160
Identities = 249/436 (57%), Positives = 322/436 (73%), Gaps = 1/436 (0%)
Frame = +3
Query: 162 LVMILRRCVETNLVLNWEKCHFMVQEGIILGHKVSKKGLEVDIAILETIKNFLPPTSVKG 341
L +L RC+E +LVLNWEKCHFMV++GI+LGH +S+KG+EVD A +E I PT+VKG
Sbjct: 1130 LEAVLHRCIEKDLVLNWEKCHFMVRQGIVLGHIISEKGIEVDKAKVELIVKLPSPTTVKG 1189
Query: 342 VRSFLGHVGFYRRFIKDFSKITKPLCSLLENDAQFKFDEDCVSAFEHLKRKLTSAPVITA 521
VR FLGH GFYRRFIK FS ++KPLC LL DA+F +DE C +F+ LK+ LT+ P++ A
Sbjct: 1190 VRQFLGHAGFYRRFIKGFSSLSKPLCELLAKDAKFIWDERCQHSFDQLKKFLTTTPIVRA 1249
Query: 522 LDWDLPFELMCDASDYAVGAVLGQRKEKIFYVIYYASMTLTDAQLNYTTTEKELLAFVYA 701
+W LPFELMCDA+D+A+GAVLGQR++ YVIYYAS TL +AQ NYTTTEKELLA V+A
Sbjct: 1250 PNWQLPFELMCDANDFAIGAVLGQREDGKPYVIYYASKTLNEAQRNYTTTEKELLAVVFA 1309
Query: 702 FDMFRAYLIDTRVIVYTDHAAIRHLVA*KDAKPCLIRWILLLQEFDLEIKDRKGTENQVA 881
D FRAYL+ + +IV+TDH+A+++L+ +DAK LIRWILLLQEFDL+IKD+KG EN VA
Sbjct: 1310 LDKFRAYLVGSFIIVFTDHSALKYLLTKQDAKARLIRWILLLQEFDLQIKDKKGVENVVA 1369
Query: 882 DHLSRLENPRREVDDKIVINESFPNEQ-FFVVKGEVS*FADYANYLVSRMVPSDLVGHQK 1058
DHLSRL + IN+ FP E F+VK +A ANYLV+ +PS+ +
Sbjct: 1370 DHLSRLVIAHN--SHPLPINDDFPEESLMFLVK--TPWYAHIANYLVTGEIPSEWNAQDR 1425
Query: 1059 RKFLHDVKWLIWDEPYLFKQCADQMIRRCIPYSETEGILQDCHASLYGGHHGGERTTARV 1238
+ F + W+EP+LFK CADQ+IR+C+P E +GIL CH + GGH ++T +V
Sbjct: 1426 KHFFAKIHSYYWEEPFLFKYCADQIIRKCVPEDEQQGILSHCHENAXGGHFASQKTAMKV 1485
Query: 1239 LQAGFYWPTIFKDAYIFVQTCDRC*RVGNILKRNEMPLNTILEVEIFYVWGIDFMGPFIF 1418
LQ+GF WP++FKDA+I + CDRC R+G + KRN+MP+N IL VE+F VWGIDFMGPF
Sbjct: 1486 LQSGFTWPSLFKDAHIMCRNCDRCQRLGKLTKRNQMPMNPILIVELFDVWGIDFMGPFPM 1545
Query: 1419 SCGNLYLLLAVDYVSK 1466
S GN Y+L+ VDYVSK
Sbjct: 1546 SFGNSYILVGVDYVSK 1561
Score = 82.4 bits (202), Expect(2) = e-160
Identities = 37/54 (68%), Positives = 45/54 (83%)
Frame = +1
Query: 1 TFAFRRMSFGLCNAPATF*RCMMAIFSDMVENNVEVFMDDFLVFGDSFDLCLKN 162
T+A+RRM FGLCNAPATF RCM++IFSDMVE +EVFMDD V+G +F+ CL N
Sbjct: 1076 TYAYRRMPFGLCNAPATFQRCMLSIFSDMVERIMEVFMDDITVYGGTFEECLVN 1129
>emb|CAN76969.1| hypothetical protein VITISV_029689 [Vitis vinifera]
Length = 2092
Score = 512 bits (1318), Expect(2) = e-160
Identities = 250/436 (57%), Positives = 321/436 (73%), Gaps = 1/436 (0%)
Frame = +3
Query: 162 LVMILRRCVETNLVLNWEKCHFMVQEGIILGHKVSKKGLEVDIAILETIKNFLPPTSVKG 341
L +L RC+E +LVLNWEKCHFMV++GI+LGH +S+KG+EVD A +E I PT+VKG
Sbjct: 980 LEAVLHRCIEKDLVLNWEKCHFMVRQGIVLGHIISEKGIEVDKAKVELIVKLPSPTTVKG 1039
Query: 342 VRSFLGHVGFYRRFIKDFSKITKPLCSLLENDAQFKFDEDCVSAFEHLKRKLTSAPVITA 521
VR FLGH GFYRRFIK FS ++KPLC LL DA+F +DE C S+F+ LK+ LT+ P++ A
Sbjct: 1040 VREFLGHAGFYRRFIKGFSSLSKPLCELLAKDAKFIWDERCQSSFDQLKKFLTTTPIVRA 1099
Query: 522 LDWDLPFELMCDASDYAVGAVLGQRKEKIFYVIYYASMTLTDAQLNYTTTEKELLAFVYA 701
+W LPFELMCDASD+A+G VLGQR++ YVIYYAS TL +AQ NYTTTEKELLA V+A
Sbjct: 1100 PNWQLPFELMCDASDFAIGTVLGQREDGKPYVIYYASKTLNEAQRNYTTTEKELLAVVFA 1159
Query: 702 FDMFRAYLIDTRVIVYTDHAAIRHLVA*KDAKPCLIRWILLLQEFDLEIKDRKGTENQVA 881
D FRAYL+ +IV+TDH+A+++L+ +DAK LIRWILLLQEFDL+IKD+KG EN VA
Sbjct: 1160 LDKFRAYLVGFFIIVFTDHSALKYLLTKQDAKARLIRWILLLQEFDLQIKDKKGVENVVA 1219
Query: 882 DHLSRLENPRREVDDKIVINESFPNEQ-FFVVKGEVS*FADYANYLVSRMVPSDLVGHQK 1058
DHLSRL + IN+ FP E F+VK +A ANYLV+ +PS+ +
Sbjct: 1220 DHLSRLVIAHN--SHPLPINDDFPEESLMFLVK--TPWYAHIANYLVTGEIPSEWNAQDR 1275
Query: 1059 RKFLHDVKWLIWDEPYLFKQCADQMIRRCIPYSETEGILQDCHASLYGGHHGGERTTARV 1238
+ F + W++P+LFK CADQ+IR+C+P E +GIL CH + GGH ++T +V
Sbjct: 1276 KHFFAKIHAYYWEKPFLFKYCADQIIRKCVPEDEQQGILSHCHENACGGHFASQKTAMKV 1335
Query: 1239 LQAGFYWPTIFKDAYIFVQTCDRC*RVGNILKRNEMPLNTILEVEIFYVWGIDFMGPFIF 1418
LQ+GF WP++FKDA+I + CDRC R+G + KRN+MP+N IL VEIF VWGIDFMGPF
Sbjct: 1336 LQSGFTWPSLFKDAHIMCRNCDRCQRLGKLTKRNQMPMNPILIVEIFDVWGIDFMGPFPM 1395
Query: 1419 SCGNLYLLLAVDYVSK 1466
S GN Y+L+ VDYVSK
Sbjct: 1396 SFGNSYMLVGVDYVSK 1411
Score = 82.4 bits (202), Expect(2) = e-160
Identities = 37/54 (68%), Positives = 45/54 (83%)
Frame = +1
Query: 1 TFAFRRMSFGLCNAPATF*RCMMAIFSDMVENNVEVFMDDFLVFGDSFDLCLKN 162
T+A+RRM FGLCNAPATF RCM++IFSDMVE +EVFMDD V+G +F+ CL N
Sbjct: 926 TYAYRRMPFGLCNAPATFQRCMLSIFSDMVERIMEVFMDDITVYGGTFEECLVN 979