BLASTX nr result

ID: Panax21_contig00008928 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008928
         (681 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG73416.1| chloroplast pigment-binding protein CP24 [Nicotia...   311   6e-83
ref|NP_001236415.1| uncharacterized protein LOC100527463 [Glycin...   308   6e-82
gb|AAD27882.2|AF139470_1 chlorophyll a/b-binding protein CP24 pr...   308   8e-82
ref|XP_002263201.1| PREDICTED: chlorophyll a-b binding protein C...   306   2e-81
ref|XP_003531552.1| PREDICTED: chlorophyll a-b binding protein C...   305   4e-81

>gb|ABG73416.1| chloroplast pigment-binding protein CP24 [Nicotiana tabacum]
          Length = 257

 Score =  311 bits (798), Expect = 6e-83
 Identities = 144/167 (86%), Positives = 155/167 (92%)
 Frame = -1

Query: 501 KRSQSLLGAPIGARLVGSVVPPKRLTVVAAAAPKKSWLPGVRAGGNFVDPEWLDGSLPGD 322
           K SQ+LLGAP+ AR +G +  PKR  V AAAAPKKSW+P V+ GGN +DPEWLDGSLPGD
Sbjct: 21  KNSQALLGAPVAAR-IGGLATPKRCIVAAAAAPKKSWIPAVKGGGNLLDPEWLDGSLPGD 79

Query: 321 YGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAYSGIPWFEAGADPGAIAPF 142
           YGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQA+SGIPWFEAGADPGAIAPF
Sbjct: 80  YGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGIPWFEAGADPGAIAPF 139

Query: 141 SFGTLLGTQLILMGWVESKRWVDFFNPESQSLEWATPWSKTAENFAN 1
           SFG+LLGTQL+LMGWVESKRWVDFFNPESQS+EWATPWSKTAENFAN
Sbjct: 140 SFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSKTAENFAN 186


>ref|NP_001236415.1| uncharacterized protein LOC100527463 [Glycine max]
           gi|255632410|gb|ACU16555.1| unknown [Glycine max]
          Length = 259

 Score =  308 bits (789), Expect = 6e-82
 Identities = 145/167 (86%), Positives = 155/167 (92%), Gaps = 1/167 (0%)
 Frame = -1

Query: 498 RSQSLLGAPIGARLVGSV-VPPKRLTVVAAAAPKKSWLPGVRAGGNFVDPEWLDGSLPGD 322
           RSQ+LL   IG ++  +V V P+RL VVAAAAPKKSWLPGVR GGN VDPEWLDGSLPGD
Sbjct: 23  RSQTLLATAIGGKVGAAVTVNPRRLIVVAAAAPKKSWLPGVRGGGNLVDPEWLDGSLPGD 82

Query: 321 YGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAYSGIPWFEAGADPGAIAPF 142
           YGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQA+SG+PWFEAGADP AIAPF
Sbjct: 83  YGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGVPWFEAGADPNAIAPF 142

Query: 141 SFGTLLGTQLILMGWVESKRWVDFFNPESQSLEWATPWSKTAENFAN 1
           SFGTLLGTQLILMGWVESKRWVDFFNP+SQS+EWATPWS+TAENFAN
Sbjct: 143 SFGTLLGTQLILMGWVESKRWVDFFNPDSQSVEWATPWSRTAENFAN 189


>gb|AAD27882.2|AF139470_1 chlorophyll a/b-binding protein CP24 precursor [Vigna radiata]
          Length = 258

 Score =  308 bits (788), Expect = 8e-82
 Identities = 144/166 (86%), Positives = 154/166 (92%)
 Frame = -1

Query: 498 RSQSLLGAPIGARLVGSVVPPKRLTVVAAAAPKKSWLPGVRAGGNFVDPEWLDGSLPGDY 319
           RSQ+LL   IG + VG  V P+RL VVAAAAPKKSW+PGVR GGN VDPEWLDGSLPGD+
Sbjct: 23  RSQTLLATSIGGK-VGVAVSPRRLIVVAAAAPKKSWIPGVRGGGNLVDPEWLDGSLPGDF 81

Query: 318 GFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAYSGIPWFEAGADPGAIAPFS 139
           GFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQA+SG+PWFEAGADP AIAPFS
Sbjct: 82  GFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGVPWFEAGADPNAIAPFS 141

Query: 138 FGTLLGTQLILMGWVESKRWVDFFNPESQSLEWATPWSKTAENFAN 1
           FG+LLGTQLILMGWVESKRWVDFFNP+SQS+EWATPWSKTAENFAN
Sbjct: 142 FGSLLGTQLILMGWVESKRWVDFFNPDSQSVEWATPWSKTAENFAN 187


>ref|XP_002263201.1| PREDICTED: chlorophyll a-b binding protein CP24 10A, chloroplastic
           [Vitis vinifera] gi|147804704|emb|CAN71620.1|
           hypothetical protein VITISV_015544 [Vitis vinifera]
          Length = 257

 Score =  306 bits (785), Expect = 2e-81
 Identities = 143/167 (85%), Positives = 154/167 (92%)
 Frame = -1

Query: 501 KRSQSLLGAPIGARLVGSVVPPKRLTVVAAAAPKKSWLPGVRAGGNFVDPEWLDGSLPGD 322
           KRSQSLL A + A+  G+ VP  R  +V AAAPKKSWLPGV+AGGN VDPEWLDGSLPGD
Sbjct: 21  KRSQSLLSAGVAAK-AGAAVPAPRRLIVVAAAPKKSWLPGVKAGGNLVDPEWLDGSLPGD 79

Query: 321 YGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAYSGIPWFEAGADPGAIAPF 142
           YGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV+GIFVGQA+SGIPWFEAGA PGA+APF
Sbjct: 80  YGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGAAPGAVAPF 139

Query: 141 SFGTLLGTQLILMGWVESKRWVDFFNPESQSLEWATPWSKTAENFAN 1
           SFGTLLGTQL+LMGWVESKRWVDFFNPESQS+EWATPWS+TAENFAN
Sbjct: 140 SFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFAN 186


>ref|XP_003531552.1| PREDICTED: chlorophyll a-b binding protein CP24 10A, chloroplastic
           [Glycine max]
          Length = 261

 Score =  305 bits (782), Expect = 4e-81
 Identities = 143/168 (85%), Positives = 154/168 (91%), Gaps = 2/168 (1%)
 Frame = -1

Query: 498 RSQSLLGAPIGARLVGSVVP--PKRLTVVAAAAPKKSWLPGVRAGGNFVDPEWLDGSLPG 325
           RSQ+LL   IG ++  + V   P+RL VVAAAAPKKSWLPGVR GGN VDPEWLDGSLPG
Sbjct: 23  RSQTLLATAIGGKVGAAAVTVSPRRLIVVAAAAPKKSWLPGVRGGGNLVDPEWLDGSLPG 82

Query: 324 DYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAYSGIPWFEAGADPGAIAP 145
           DYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQA+SG+PWFEAGADP AIAP
Sbjct: 83  DYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGVPWFEAGADPNAIAP 142

Query: 144 FSFGTLLGTQLILMGWVESKRWVDFFNPESQSLEWATPWSKTAENFAN 1
           FSFGTLLGTQLILMGWVESKRWVDFFNP+SQS+EWATPWS+T+ENFAN
Sbjct: 143 FSFGTLLGTQLILMGWVESKRWVDFFNPDSQSVEWATPWSRTSENFAN 190


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