BLASTX nr result

ID: Panax21_contig00008909 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008909
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277982.2| PREDICTED: protein TIME FOR COFFEE-like [Vit...   117   1e-24
ref|XP_002311616.1| predicted protein [Populus trichocarpa] gi|2...   102   2e-20
ref|XP_002516769.1| ATP binding protein, putative [Ricinus commu...    95   5e-18
ref|XP_002327401.1| predicted protein [Populus trichocarpa] gi|2...    83   3e-14
ref|XP_003592415.1| Protein TIME FOR COFFEE [Medicago truncatula...    79   4e-13

>ref|XP_002277982.2| PREDICTED: protein TIME FOR COFFEE-like [Vitis vinifera]
          Length = 1587

 Score =  117 bits (292), Expect = 1e-24
 Identities = 73/147 (49%), Positives = 85/147 (57%), Gaps = 9/147 (6%)
 Frame = -2

Query: 416  DGKSGGGDSSNADEERKVIARKAPASSGGQSIAFSRPDLTDVSGSALPGNSVVDSSARTL 237
            +GKSG GDSS+ +EERK +A KA A++ GQSIAFSRPDL D S S +PGN V+DSS RTL
Sbjct: 1108 EGKSGIGDSSSVEEERKALAGKA-AATAGQSIAFSRPDLQDTSVSTIPGNGVIDSSTRTL 1166

Query: 236  NLASGPTR-----MPNVMGAVGTPNS----XXXXXXXXXXXXXXXXXXXXXXXXXXXXAR 84
            NL+S P R      P    A   PNS                                AR
Sbjct: 1167 NLSSAPARASASVSPATASATNAPNSQQRQQQQQQQQQQQQMIQLQKQHQFATVAAAAAR 1226

Query: 83   SKMPATSNGSAYSEHLISSSAIAAKFP 3
            SK PATSNGS YS+HL SSS++AAKFP
Sbjct: 1227 SKTPATSNGSVYSDHLPSSSSMAAKFP 1253


>ref|XP_002311616.1| predicted protein [Populus trichocarpa] gi|222851436|gb|EEE88983.1|
            predicted protein [Populus trichocarpa]
          Length = 1518

 Score =  102 bits (255), Expect = 2e-20
 Identities = 65/151 (43%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
 Frame = -2

Query: 416  DGKSGGGDSSNADEERKVIARKAPASSGGQSIAFSRPDLTDVSGSALPGNSVVDSSARTL 237
            +G SGG D+SN +EERK +A      S GQSI FSRPDLTD   S +P N+VVDSSAR L
Sbjct: 1051 EGNSGGNDTSNVEEERKAMAGGKTPLSAGQSIVFSRPDLTDSPVSTMPVNNVVDSSARNL 1110

Query: 236  NLASGPTR-----MPNVMGAVGTP--------NSXXXXXXXXXXXXXXXXXXXXXXXXXX 96
            NL S P R     M   +G    P        N                           
Sbjct: 1111 NLGSAPARTSGSFMSATIGTGNAPSMQQQMQRNHHQQQQQQWNQQIFQFQKQQQFAAAAA 1170

Query: 95   XXARSKMPATSNGSAYSEHLISSSAIAAKFP 3
               RSK PATSNGS YS+H+ SSS+ A KFP
Sbjct: 1171 ASTRSKTPATSNGSVYSDHISSSSSAATKFP 1201


>ref|XP_002516769.1| ATP binding protein, putative [Ricinus communis]
            gi|223543857|gb|EEF45383.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 1613

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 61/147 (41%), Positives = 81/147 (55%), Gaps = 9/147 (6%)
 Frame = -2

Query: 416  DGKSGGGDSSNADEERKVIARKAPASSGGQSIAFSRPDLTDVSGSALPGNSVVDSSARTL 237
            +GK+GG D  +A+++RK ++     ++ GQSIAFSRPDLT+ S   +P N+V+DSS R L
Sbjct: 1145 EGKTGGNDGLHAEDDRKTMSGVKVHATAGQSIAFSRPDLTETSVLTMPSNTVIDSSVRPL 1204

Query: 236  NLASGPTRMP-NVMGA-VGTPNS-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXAR 84
            NL S P R   +VM A + T N+                                   AR
Sbjct: 1205 NLVSTPGRASGSVMSASISTVNASSVQQQVQRNQQQQHQQQMIQLQKQHQYAAAAAASAR 1264

Query: 83   SKMPATSNGSAYSEHLISSSAIAAKFP 3
            SK PATSNGS Y EH+ SSS++AAKFP
Sbjct: 1265 SKTPATSNGSVYPEHIPSSSSMAAKFP 1291


>ref|XP_002327401.1| predicted protein [Populus trichocarpa] gi|222835955|gb|EEE74376.1|
           predicted protein [Populus trichocarpa]
          Length = 252

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 60/155 (38%), Positives = 78/155 (50%), Gaps = 17/155 (10%)
 Frame = -2

Query: 416 DGKSGGGDSSNADEERK--VIARKAPASSGGQSIAFSRPD-------LTDVSGSALPGNS 264
           +GK+GG D+SN + ERK  ++  + P + GGQSI FSR D       LTD S S +P N+
Sbjct: 67  EGKNGGNDTSNMEGERKADMVGGQTPLT-GGQSIVFSRLDFVFSRLDLTDSSVSTMPVNN 125

Query: 263 VVDSSARTLNLASGPTR-----MPNVMGAVGTPN---SXXXXXXXXXXXXXXXXXXXXXX 108
           VVDSSARTLNL S   R     M   +G+V  P+                          
Sbjct: 126 VVDSSARTLNLGSTLARTSSPVMSATIGSVNAPSIQQQMQWNQQQQQRSQQILQLQKRQQ 185

Query: 107 XXXXXXARSKMPATSNGSAYSEHLISSSAIAAKFP 3
                  RS+ P TSNGS YS+H+ SSS++  K P
Sbjct: 186 FAAAASTRSETPTTSNGSVYSDHISSSSSMGTKLP 220


>ref|XP_003592415.1| Protein TIME FOR COFFEE [Medicago truncatula]
            gi|355481463|gb|AES62666.1| Protein TIME FOR COFFEE
            [Medicago truncatula]
          Length = 1554

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 49/133 (36%), Positives = 76/133 (57%), Gaps = 2/133 (1%)
 Frame = -2

Query: 395  DSSNADEERKVIARKAPASSGGQSIAFSRPDLTDVSGSALPGNSVVDSSARTLNLASGPT 216
            +SSN +E+RK I+ K P ++GGQ+IAF+R D+ D S +++  N+V+DSS R+LNL S  +
Sbjct: 1115 NSSNLEEDRKAISGKIP-TTGGQNIAFARSDVADPSMTSIACNNVIDSSGRSLNLGSASS 1173

Query: 215  RMP--NVMGAVGTPNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXARSKMPATSNGSAYSE 42
            R     +  A+ +  +                            AR+K P+TSNGS YS+
Sbjct: 1174 RASASGMPSAINSNAAGSQQQMQRNQQILQLQKQNQFAAAAVAAARNKTPSTSNGSIYSD 1233

Query: 41   HLISSSAIAAKFP 3
            +L S+S+I+ KFP
Sbjct: 1234 NLPSTSSISTKFP 1246


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