BLASTX nr result

ID: Panax21_contig00008908 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008908
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277982.2| PREDICTED: protein TIME FOR COFFEE-like [Vit...   115   4e-24
ref|XP_002311616.1| predicted protein [Populus trichocarpa] gi|2...   105   3e-21
ref|XP_002516769.1| ATP binding protein, putative [Ricinus commu...    94   9e-18
ref|XP_002327401.1| predicted protein [Populus trichocarpa] gi|2...    86   3e-15
ref|XP_003592415.1| Protein TIME FOR COFFEE [Medicago truncatula...    83   2e-14

>ref|XP_002277982.2| PREDICTED: protein TIME FOR COFFEE-like [Vitis vinifera]
          Length = 1587

 Score =  115 bits (288), Expect = 4e-24
 Identities = 72/147 (48%), Positives = 82/147 (55%), Gaps = 8/147 (5%)
 Frame = +2

Query: 2    DGKSGGGYSSNADEERKVIAGKAPAPSGGQSIAFSRPDLTDASGSALPGNSVVDSSARTL 181
            +GKSG G SS+ +EERK +AGKA A + GQSIAFSRPDL D S S +PGN V+DSS RTL
Sbjct: 1108 EGKSGIGDSSSVEEERKALAGKAAA-TAGQSIAFSRPDLQDTSVSTIPGNGVIDSSTRTL 1166

Query: 182  NLASGPTR-----MPNVMGTVGTPNS---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR 337
            NL+S P R      P        PNS                                 R
Sbjct: 1167 NLSSAPARASASVSPATASATNAPNSQQRQQQQQQQQQQQQMIQLQKQHQFATVAAAAAR 1226

Query: 338  SKMPATSNGSAYSEHLISSSSIAAKFP 418
            SK PATSNGS YS+HL SSSS+AAKFP
Sbjct: 1227 SKTPATSNGSVYSDHLPSSSSMAAKFP 1253


>ref|XP_002311616.1| predicted protein [Populus trichocarpa] gi|222851436|gb|EEE88983.1|
            predicted protein [Populus trichocarpa]
          Length = 1518

 Score =  105 bits (263), Expect = 3e-21
 Identities = 66/151 (43%), Positives = 78/151 (51%), Gaps = 12/151 (7%)
 Frame = +2

Query: 2    DGKSGGGYSSNADEERKVIAGKAPAPSGGQSIAFSRPDLTDASGSALPGNSVVDSSARTL 181
            +G SGG  +SN +EERK +AG     S GQSI FSRPDLTD+  S +P N+VVDSSAR L
Sbjct: 1051 EGNSGGNDTSNVEEERKAMAGGKTPLSAGQSIVFSRPDLTDSPVSTMPVNNVVDSSARNL 1110

Query: 182  NLASGPTRMPN--VMGTVGTPN----------SXXXXXXXXXXXXXXXXXXXXXXXXXXX 325
            NL S P R     +  T+GT N          +                           
Sbjct: 1111 NLGSAPARTSGSFMSATIGTGNAPSMQQQMQRNHHQQQQQQWNQQIFQFQKQQQFAAAAA 1170

Query: 326  XXXRSKMPATSNGSAYSEHLISSSSIAAKFP 418
               RSK PATSNGS YS+H+ SSSS A KFP
Sbjct: 1171 ASTRSKTPATSNGSVYSDHISSSSSAATKFP 1201


>ref|XP_002516769.1| ATP binding protein, putative [Ricinus communis]
            gi|223543857|gb|EEF45383.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 1613

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 58/147 (39%), Positives = 77/147 (52%), Gaps = 8/147 (5%)
 Frame = +2

Query: 2    DGKSGGGYSSNADEERKVIAGKAPAPSGGQSIAFSRPDLTDASGSALPGNSVVDSSARTL 181
            +GK+GG    +A+++RK ++G     + GQSIAFSRPDLT+ S   +P N+V+DSS R L
Sbjct: 1145 EGKTGGNDGLHAEDDRKTMSGVKVHATAGQSIAFSRPDLTETSVLTMPSNTVIDSSVRPL 1204

Query: 182  NLASGPTRMPN--VMGTVGTPNS------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR 337
            NL S P R     +  ++ T N+                                    R
Sbjct: 1205 NLVSTPGRASGSVMSASISTVNASSVQQQVQRNQQQQHQQQMIQLQKQHQYAAAAAASAR 1264

Query: 338  SKMPATSNGSAYSEHLISSSSIAAKFP 418
            SK PATSNGS Y EH+ SSSS+AAKFP
Sbjct: 1265 SKTPATSNGSVYPEHIPSSSSMAAKFP 1291


>ref|XP_002327401.1| predicted protein [Populus trichocarpa] gi|222835955|gb|EEE74376.1|
           predicted protein [Populus trichocarpa]
          Length = 252

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 61/155 (39%), Positives = 80/155 (51%), Gaps = 16/155 (10%)
 Frame = +2

Query: 2   DGKSGGGYSSNADEERK--VIAGKAPAPSGGQSIAFSRPD-------LTDASGSALPGNS 154
           +GK+GG  +SN + ERK  ++ G+ P  +GGQSI FSR D       LTD+S S +P N+
Sbjct: 67  EGKNGGNDTSNMEGERKADMVGGQTPL-TGGQSIVFSRLDFVFSRLDLTDSSVSTMPVNN 125

Query: 155 VVDSSARTLNLAS--GPTRMPNVMGTVGTPNS-----XXXXXXXXXXXXXXXXXXXXXXX 313
           VVDSSARTLNL S    T  P +  T+G+ N+                            
Sbjct: 126 VVDSSARTLNLGSTLARTSSPVMSATIGSVNAPSIQQQMQWNQQQQQRSQQILQLQKRQQ 185

Query: 314 XXXXXXXRSKMPATSNGSAYSEHLISSSSIAAKFP 418
                  RS+ P TSNGS YS+H+ SSSS+  K P
Sbjct: 186 FAAAASTRSETPTTSNGSVYSDHISSSSSMGTKLP 220


>ref|XP_003592415.1| Protein TIME FOR COFFEE [Medicago truncatula]
            gi|355481463|gb|AES62666.1| Protein TIME FOR COFFEE
            [Medicago truncatula]
          Length = 1554

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 52/136 (38%), Positives = 76/136 (55%), Gaps = 5/136 (3%)
 Frame = +2

Query: 26   SSNADEERKVIAGKAPAPSGGQSIAFSRPDLTDASGSALPGNSVVDSSARTLNLASGPTR 205
            SSN +E+RK I+GK P  +GGQ+IAF+R D+ D S +++  N+V+DSS R+LNL S  +R
Sbjct: 1116 SSNLEEDRKAISGKIPT-TGGQNIAFARSDVADPSMTSIACNNVIDSSGRSLNLGSASSR 1174

Query: 206  -----MPNVMGTVGTPNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSKMPATSNGSA 370
                 MP+ + +    N+                              R+K P+TSNGS 
Sbjct: 1175 ASASGMPSAINS----NAAGSQQQMQRNQQILQLQKQNQFAAAAVAAARNKTPSTSNGSI 1230

Query: 371  YSEHLISSSSIAAKFP 418
            YS++L S+SSI+ KFP
Sbjct: 1231 YSDNLPSTSSISTKFP 1246


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