BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008902
         (731 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514778.1| pentatricopeptide repeat-containing protein,...    98   2e-18
ref|XP_002270546.2| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    86   1e-14
emb|CAN64008.1| hypothetical protein VITISV_000279 [Vitis vinifera]    86   1e-14
ref|XP_002300357.1| predicted protein [Populus trichocarpa] gi|2...    85   2e-14
ref|XP_004138984.1| PREDICTED: pentatricopeptide repeat-containi...    84   4e-14

>ref|XP_002514778.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545829|gb|EEF47332.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 584

 Score = 98.2 bits (243), Expect = 2e-18
 Identities = 67/199 (33%), Positives = 101/199 (50%), Gaps = 20/199 (10%)
 Frame = +3

Query: 135 HFHQTPPLFFCQESSNPVSNDDVETS--QIESTVFEESSETYDSCDTSNVLDKMPSSTSS 308
           HF    P   CQ++   +SN  V T+  +I+ +    +   YD  D   V D    + S 
Sbjct: 30  HFSNWVP---CQQNLRFLSNLSVNTNDTEIDHSSHGSAQNNYDGDDEGKVTDTHLHNFSP 86

Query: 309 SSIFGEMSENVTVDGLDXXXXXXXXXXXXXX------------------VDLEKLEKVLS 434
            +   E+S + + +  D                                +D +KLE VLS
Sbjct: 87  QADINEVSHHYSSENGDTHMDNFVQRSPDLAEEANTQIHGEVEGHVDYVIDADKLENVLS 146

Query: 435 LLQSSIIDGSLELSLDSMDISLSEEFVLRVVETPLVPGEKLIEFLIWVLNIHEPLVTTRV 614
           LLQSS  D SLE SLD+MD+ L E+F+++V+ETPL+ G+ LI+F  W +   +  VTTR+
Sbjct: 147 LLQSST-DASLESSLDNMDLHLHEDFIVKVLETPLIVGDNLIKFFNWAIKQPDINVTTRL 205

Query: 615 VESLVRAACNEVKKNNAFA 671
           V  LVRA C+E++K +A+A
Sbjct: 206 VHPLVRAICSELRKKDAYA 224


>ref|XP_002270546.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g02650, mitochondrial-like [Vitis vinifera]
          Length = 509

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 70/185 (37%), Positives = 90/185 (48%), Gaps = 6/185 (3%)
 Frame = +3

Query: 135 HFHQTPPLFFCQESSNPVSN-----DDVETSQIESTVFEESSETYDSCDTSNVLDKMPSS 299
           HF    P F   ++    SN     D  + S IES +          C  S   D+  S 
Sbjct: 41  HFSTPKPSFLVSQNPRFFSNLSPDIDGDDDSTIESAI----------CSPSESEDQHFSP 90

Query: 300 TSSSSIFGEMSENVTVDGLDXXXXXXXXXXXXXXVDLEKLEKVLSLLQSS-IIDGSLELS 476
            S  +  G   E   VD LD              VDL+KLE VLSLLQSS    GSLE S
Sbjct: 91  ISDEND-GTQIEGFEVD-LDKSEGFE--------VDLDKLESVLSLLQSSGDAVGSLESS 140

Query: 477 LDSMDISLSEEFVLRVVETPLVPGEKLIEFLIWVLNIHEPLVTTRVVESLVRAACNEVKK 656
            ++M +SL+EEFV+RV+ETP VP   LI F  W        VTTR V++LVRA C  V++
Sbjct: 141 FNAMGLSLNEEFVVRVLETPFVPANNLIGFFKWSWKNPGFSVTTRAVDALVRAVCQSVRR 200

Query: 657 NNAFA 671
            + ++
Sbjct: 201 KDTYS 205


>emb|CAN64008.1| hypothetical protein VITISV_000279 [Vitis vinifera]
          Length = 549

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 70/185 (37%), Positives = 90/185 (48%), Gaps = 6/185 (3%)
 Frame = +3

Query: 135 HFHQTPPLFFCQESSNPVSN-----DDVETSQIESTVFEESSETYDSCDTSNVLDKMPSS 299
           HF    P F   ++    SN     D  + S IES +          C  S   D+  S 
Sbjct: 41  HFSTPKPSFLVSQNPRFFSNLSPDIDGDDDSTIESAI----------CSPSESEDQHFSP 90

Query: 300 TSSSSIFGEMSENVTVDGLDXXXXXXXXXXXXXXVDLEKLEKVLSLLQSS-IIDGSLELS 476
            S  +  G   E   VD LD              VDL+KLE VLSLLQSS    GSLE S
Sbjct: 91  ISDEND-GTQIEGFEVD-LDKSEGFE--------VDLDKLESVLSLLQSSGDAVGSLESS 140

Query: 477 LDSMDISLSEEFVLRVVETPLVPGEKLIEFLIWVLNIHEPLVTTRVVESLVRAACNEVKK 656
            ++M +SL+EEFV+RV+ETP VP   LI F  W        VTTR V++LVRA C  V++
Sbjct: 141 FNAMGLSLNEEFVVRVLETPFVPANNLIGFFKWSWKNPGFSVTTRAVDALVRAVCQSVRR 200

Query: 657 NNAFA 671
            + ++
Sbjct: 201 KDTYS 205


>ref|XP_002300357.1| predicted protein [Populus trichocarpa] gi|222847615|gb|EEE85162.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 46/91 (50%), Positives = 64/91 (70%), Gaps = 1/91 (1%)
 Frame = +3

Query: 402 VDLEKLEKVLSLLQSSIIDGSLELSLDSMDISLSEEFVLRVVETPLVPGEKLIEFLIWVL 581
           +D+EKLE VL LLQSS  DGSLE +LD+  + L EEFV++V+ETP V GE LI F  W +
Sbjct: 27  IDVEKLENVLHLLQSSD-DGSLESTLDTFSLDLHEEFVVKVLETPHVLGENLIRFFKWAM 85

Query: 582 NIHEPLVTTRVVESLVRAAC-NEVKKNNAFA 671
              +  VTTR ++ LV + C +E+++ NA+A
Sbjct: 86  KKQDLSVTTRAIDVLVSSICSSELRRKNAYA 116


>ref|XP_004138984.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02650,
           mitochondrial-like [Cucumis sativus]
           gi|449477884|ref|XP_004155152.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g02650,
           mitochondrial-like [Cucumis sativus]
          Length = 479

 Score = 83.6 bits (205), Expect = 4e-14
 Identities = 45/91 (49%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
 Frame = +3

Query: 402 VDLEKLEKVLSLLQSSIIDGSLELSLDSMDISLSEEFVLRVVETPLVPGEKLIEFLIWVL 581
           V++E+LE VLSL+QS++ DGS E SLD M ++L+E+FVL+V+ETP + GE LI F  W +
Sbjct: 29  VNVEQLESVLSLIQSTV-DGSFESSLDEMRLTLNEDFVLKVIETPHILGENLIRFFRWAV 87

Query: 582 NIH-EPLVTTRVVESLVRAACNEVKKNNAFA 671
           N H E  V+T VV+ LVR  C  +++  A++
Sbjct: 88  NSHPEFEVSTPVVDVLVRVVCANLRQRVAYS 118