BLASTX nr result
ID: Panax21_contig00008893
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00008893
(542 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003631583.1| PREDICTED: zinc finger protein GIS2-like iso... 169 3e-40
emb|CBI37994.3| unnamed protein product [Vitis vinifera] 169 3e-40
ref|XP_002267480.1| PREDICTED: zinc finger protein GIS2-like iso... 169 3e-40
emb|CAN70803.1| hypothetical protein VITISV_044067 [Vitis vinifera] 169 3e-40
ref|XP_004148537.1| PREDICTED: DNA-binding protein HEXBP-like [C... 165 4e-39
>ref|XP_003631583.1| PREDICTED: zinc finger protein GIS2-like isoform 2 [Vitis vinifera]
Length = 246
Score = 169 bits (428), Expect = 3e-40
Identities = 69/83 (83%), Positives = 79/83 (95%)
Frame = -1
Query: 542 GKTGHRARDCSAPQLPPGDLRLCNNCFKQGHVAADCTNDKACKNCRKTGHLARDCQNDPV 363
GKTGH ARDCSAP +PPGDLRLCNNC+KQGH+AADCTNDKAC NCRKTGHLARDC+NDPV
Sbjct: 104 GKTGHLARDCSAPPVPPGDLRLCNNCYKQGHIAADCTNDKACNNCRKTGHLARDCRNDPV 163
Query: 362 CNMCNISGHVARECPKANMMDER 294
CN+CN+SGHVAR+CPKAN++ +R
Sbjct: 164 CNLCNVSGHVARQCPKANVLGDR 186
Score = 73.2 bits (178), Expect = 2e-11
Identities = 28/73 (38%), Positives = 46/73 (63%)
Frame = -1
Query: 539 KTGHRARDCSAPQLPPGDLRLCNNCFKQGHVAADCTNDKACKNCRKTGHLARDCQNDPVC 360
+ GH AR+C ++ +C+NC GH+A++CT C NC++ GH A +C N+ +C
Sbjct: 48 RPGHYARECP-------NVAVCHNCSLPGHIASECTTRSLCWNCQEPGHTASNCPNEGIC 100
Query: 359 NMCNISGHVAREC 321
+ C +GH+AR+C
Sbjct: 101 HTCGKTGHLARDC 113
Score = 68.2 bits (165), Expect = 8e-10
Identities = 29/34 (85%), Positives = 31/34 (91%), Gaps = 1/34 (2%)
Frame = -1
Query: 101 YRDIVCRNCQQVGHMSRDCVA-LMICHNCGGRGH 3
+RDIVCRNCQQ+GHMSRDC A LMIC NCGGRGH
Sbjct: 195 FRDIVCRNCQQLGHMSRDCAAPLMICRNCGGRGH 228
Score = 58.9 bits (141), Expect = 5e-07
Identities = 23/54 (42%), Positives = 28/54 (51%)
Frame = -1
Query: 479 LCNNCFKQGHVAADCTNDKACKNCRKTGHLARDCQNDPVCNMCNISGHVARECP 318
LC NC + GH A +C N C NC GH+A +C +C C GH A CP
Sbjct: 42 LCKNCKRPGHYARECPNVAVCHNCSLPGHIASECTTRSLCWNCQEPGHTASNCP 95
>emb|CBI37994.3| unnamed protein product [Vitis vinifera]
Length = 259
Score = 169 bits (428), Expect = 3e-40
Identities = 69/83 (83%), Positives = 79/83 (95%)
Frame = -1
Query: 542 GKTGHRARDCSAPQLPPGDLRLCNNCFKQGHVAADCTNDKACKNCRKTGHLARDCQNDPV 363
GKTGH ARDCSAP +PPGDLRLCNNC+KQGH+AADCTNDKAC NCRKTGHLARDC+NDPV
Sbjct: 104 GKTGHLARDCSAPPVPPGDLRLCNNCYKQGHIAADCTNDKACNNCRKTGHLARDCRNDPV 163
Query: 362 CNMCNISGHVARECPKANMMDER 294
CN+CN+SGHVAR+CPKAN++ +R
Sbjct: 164 CNLCNVSGHVARQCPKANVLGDR 186
Score = 73.2 bits (178), Expect = 2e-11
Identities = 28/73 (38%), Positives = 46/73 (63%)
Frame = -1
Query: 539 KTGHRARDCSAPQLPPGDLRLCNNCFKQGHVAADCTNDKACKNCRKTGHLARDCQNDPVC 360
+ GH AR+C ++ +C+NC GH+A++CT C NC++ GH A +C N+ +C
Sbjct: 48 RPGHYARECP-------NVAVCHNCSLPGHIASECTTRSLCWNCQEPGHTASNCPNEGIC 100
Query: 359 NMCNISGHVAREC 321
+ C +GH+AR+C
Sbjct: 101 HTCGKTGHLARDC 113
Score = 68.2 bits (165), Expect = 8e-10
Identities = 29/34 (85%), Positives = 31/34 (91%), Gaps = 1/34 (2%)
Frame = -1
Query: 101 YRDIVCRNCQQVGHMSRDCVA-LMICHNCGGRGH 3
+RDIVCRNCQQ+GHMSRDC A LMIC NCGGRGH
Sbjct: 195 FRDIVCRNCQQLGHMSRDCAAPLMICRNCGGRGH 228
Score = 58.9 bits (141), Expect = 5e-07
Identities = 23/54 (42%), Positives = 28/54 (51%)
Frame = -1
Query: 479 LCNNCFKQGHVAADCTNDKACKNCRKTGHLARDCQNDPVCNMCNISGHVARECP 318
LC NC + GH A +C N C NC GH+A +C +C C GH A CP
Sbjct: 42 LCKNCKRPGHYARECPNVAVCHNCSLPGHIASECTTRSLCWNCQEPGHTASNCP 95
>ref|XP_002267480.1| PREDICTED: zinc finger protein GIS2-like isoform 1 [Vitis vinifera]
Length = 258
Score = 169 bits (428), Expect = 3e-40
Identities = 69/83 (83%), Positives = 79/83 (95%)
Frame = -1
Query: 542 GKTGHRARDCSAPQLPPGDLRLCNNCFKQGHVAADCTNDKACKNCRKTGHLARDCQNDPV 363
GKTGH ARDCSAP +PPGDLRLCNNC+KQGH+AADCTNDKAC NCRKTGHLARDC+NDPV
Sbjct: 116 GKTGHLARDCSAPPVPPGDLRLCNNCYKQGHIAADCTNDKACNNCRKTGHLARDCRNDPV 175
Query: 362 CNMCNISGHVARECPKANMMDER 294
CN+CN+SGHVAR+CPKAN++ +R
Sbjct: 176 CNLCNVSGHVARQCPKANVLGDR 198
Score = 73.2 bits (178), Expect = 2e-11
Identities = 28/73 (38%), Positives = 46/73 (63%)
Frame = -1
Query: 539 KTGHRARDCSAPQLPPGDLRLCNNCFKQGHVAADCTNDKACKNCRKTGHLARDCQNDPVC 360
+ GH AR+C ++ +C+NC GH+A++CT C NC++ GH A +C N+ +C
Sbjct: 60 RPGHYARECP-------NVAVCHNCSLPGHIASECTTRSLCWNCQEPGHTASNCPNEGIC 112
Query: 359 NMCNISGHVAREC 321
+ C +GH+AR+C
Sbjct: 113 HTCGKTGHLARDC 125
Score = 68.2 bits (165), Expect = 8e-10
Identities = 29/34 (85%), Positives = 31/34 (91%), Gaps = 1/34 (2%)
Frame = -1
Query: 101 YRDIVCRNCQQVGHMSRDCVA-LMICHNCGGRGH 3
+RDIVCRNCQQ+GHMSRDC A LMIC NCGGRGH
Sbjct: 207 FRDIVCRNCQQLGHMSRDCAAPLMICRNCGGRGH 240
Score = 58.9 bits (141), Expect = 5e-07
Identities = 23/54 (42%), Positives = 28/54 (51%)
Frame = -1
Query: 479 LCNNCFKQGHVAADCTNDKACKNCRKTGHLARDCQNDPVCNMCNISGHVARECP 318
LC NC + GH A +C N C NC GH+A +C +C C GH A CP
Sbjct: 54 LCKNCKRPGHYARECPNVAVCHNCSLPGHIASECTTRSLCWNCQEPGHTASNCP 107
>emb|CAN70803.1| hypothetical protein VITISV_044067 [Vitis vinifera]
Length = 1850
Score = 169 bits (428), Expect = 3e-40
Identities = 69/83 (83%), Positives = 79/83 (95%)
Frame = -1
Query: 542 GKTGHRARDCSAPQLPPGDLRLCNNCFKQGHVAADCTNDKACKNCRKTGHLARDCQNDPV 363
GKTGH ARDCSAP +PPGDLRLCNNC+KQGH+AADCTNDKAC NCRKTGHLARDC+NDPV
Sbjct: 1644 GKTGHLARDCSAPPVPPGDLRLCNNCYKQGHIAADCTNDKACNNCRKTGHLARDCRNDPV 1703
Query: 362 CNMCNISGHVARECPKANMMDER 294
CN+CN+SGHVAR+CPKAN++ +R
Sbjct: 1704 CNLCNVSGHVARQCPKANVLGDR 1726
Score = 68.2 bits (165), Expect = 8e-10
Identities = 29/34 (85%), Positives = 31/34 (91%), Gaps = 1/34 (2%)
Frame = -1
Query: 101 YRDIVCRNCQQVGHMSRDCVA-LMICHNCGGRGH 3
+RDIVCRNCQQ+GHMSRDC A LMIC NCGGRGH
Sbjct: 1735 FRDIVCRNCQQLGHMSRDCAAPLMICRNCGGRGH 1768
Score = 57.0 bits (136), Expect = 2e-06
Identities = 19/44 (43%), Positives = 31/44 (70%)
Frame = -1
Query: 452 HVAADCTNDKACKNCRKTGHLARDCQNDPVCNMCNISGHVAREC 321
H+A++CT C NC++ GH A +C N+ +C+ C +GH+AR+C
Sbjct: 1610 HIASECTTRSLCWNCQEPGHTASNCPNEGICHTCGKTGHLARDC 1653
>ref|XP_004148537.1| PREDICTED: DNA-binding protein HEXBP-like [Cucumis sativus]
gi|449519884|ref|XP_004166964.1| PREDICTED: DNA-binding
protein HEXBP-like [Cucumis sativus]
Length = 260
Score = 165 bits (418), Expect = 4e-39
Identities = 65/83 (78%), Positives = 78/83 (93%)
Frame = -1
Query: 542 GKTGHRARDCSAPQLPPGDLRLCNNCFKQGHVAADCTNDKACKNCRKTGHLARDCQNDPV 363
GK GHRARDC+AP +PPGDLRLCNNC+KQGH+AADCTN+KAC NCRKTGHLARDC NDP+
Sbjct: 108 GKAGHRARDCTAPPMPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPI 167
Query: 362 CNMCNISGHVARECPKANMMDER 294
CN+CN+SGHVAR+CPK+N++ +R
Sbjct: 168 CNLCNVSGHVARQCPKSNVLGDR 190
Score = 73.9 bits (180), Expect = 1e-11
Identities = 29/73 (39%), Positives = 45/73 (61%)
Frame = -1
Query: 539 KTGHRARDCSAPQLPPGDLRLCNNCFKQGHVAADCTNDKACKNCRKTGHLARDCQNDPVC 360
+ GH AR+C ++ +C+NC GH+A++CT C NCR+ GH+A C N+ +C
Sbjct: 52 RPGHFARECP-------NVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPNEGIC 104
Query: 359 NMCNISGHVAREC 321
+ C +GH AR+C
Sbjct: 105 HTCGKAGHRARDC 117
Score = 71.2 bits (173), Expect = 9e-11
Identities = 29/34 (85%), Positives = 32/34 (94%), Gaps = 1/34 (2%)
Frame = -1
Query: 101 YRDIVCRNCQQVGHMSRDCVA-LMICHNCGGRGH 3
YRD+VCRNCQQ+GHMSRDC+ LMICHNCGGRGH
Sbjct: 209 YRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGH 242