BLASTX nr result

ID: Panax21_contig00008879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008879
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308007.1| predicted protein [Populus trichocarpa] gi|2...    91   7e-17
emb|CBI30057.3| unnamed protein product [Vitis vinifera]               87   1e-15
ref|XP_002277151.1| PREDICTED: protein IQ-DOMAIN 14-like [Vitis ...    87   1e-15
emb|CAN64892.1| hypothetical protein VITISV_016441 [Vitis vinifera]    86   3e-15
ref|NP_001233793.1| calmodulin binding protein SUN-like [Solanum...    85   5e-15

>ref|XP_002308007.1| predicted protein [Populus trichocarpa] gi|222853983|gb|EEE91530.1|
           predicted protein [Populus trichocarpa]
          Length = 431

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 52/131 (39%), Positives = 72/131 (54%), Gaps = 13/131 (9%)
 Frame = -2

Query: 401 VRRMVISHLKSLQSIAKAHSQAQQIRVPRIDESCIYAEEKQFFSPKKMLEDKDTK----- 237
           VRR  +  LK L S AK  S+ Q   +   D  C  ++ KQ    KK + +K+ K     
Sbjct: 143 VRRQAVIKLKHLPSKAKMLSEVQSKDIATADGFCRNSDNKQVVKSKKEVREKENKGKNHK 202

Query: 236 --------LGCKINENWDYSLFSKEDMQFSWLQRQEAITRRDRMKKYSFSHRERRNHLIQ 81
                   L      +WDYS+ SKED++  WL++QEA  +R+RM KYSFSHRER N L++
Sbjct: 203 KDAQPEHMLEFNSQRSWDYSMLSKEDVEALWLKKQEANIKRERMMKYSFSHRERGNSLLE 262

Query: 80  EESSNKENGRR 48
           E    KE+GR+
Sbjct: 263 ELLLAKESGRQ 273


>emb|CBI30057.3| unnamed protein product [Vitis vinifera]
          Length = 444

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 55/133 (41%), Positives = 80/133 (60%), Gaps = 7/133 (5%)
 Frame = -2

Query: 401 VRRMVISHLKSLQSIAKAHSQAQQIRVPRIDESCIYAEEKQFFSPKKM--LEDKD---TK 237
           +RR VI+ LK L S A   +Q  +  V   +ES   ++ ++F  PK++   E KD    +
Sbjct: 143 LRRQVITTLKCLPSTANNQAQVNKRGVLTANESYKDSDNRKFLRPKELGGREIKDYVIEQ 202

Query: 236 LGCKINENWDYSLFSKEDMQFSWLQRQEAITRRDRMKKYSFSHRERRN-HLIQEESSNKE 60
           L     ++WD S+  KEDM+  WL++QEA+T+R+RMKKYS SHRER N  + +E  S KE
Sbjct: 203 LEGSSKKSWDCSMLLKEDMETIWLRKQEAVTKRERMKKYSSSHRERINAQMTEETESYKE 262

Query: 59  NGR-RPWFEECQD 24
           NG+    FE+  D
Sbjct: 263 NGKWNSQFEQWMD 275


>ref|XP_002277151.1| PREDICTED: protein IQ-DOMAIN 14-like [Vitis vinifera]
          Length = 422

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 55/133 (41%), Positives = 80/133 (60%), Gaps = 7/133 (5%)
 Frame = -2

Query: 401 VRRMVISHLKSLQSIAKAHSQAQQIRVPRIDESCIYAEEKQFFSPKKM--LEDKD---TK 237
           +RR VI+ LK L S A   +Q  +  V   +ES   ++ ++F  PK++   E KD    +
Sbjct: 143 LRRQVITTLKCLPSTANNQAQVNKRGVLTANESYKDSDNRKFLRPKELGGREIKDYVIEQ 202

Query: 236 LGCKINENWDYSLFSKEDMQFSWLQRQEAITRRDRMKKYSFSHRERRN-HLIQEESSNKE 60
           L     ++WD S+  KEDM+  WL++QEA+T+R+RMKKYS SHRER N  + +E  S KE
Sbjct: 203 LEGSSKKSWDCSMLLKEDMETIWLRKQEAVTKRERMKKYSSSHRERINAQMTEETESYKE 262

Query: 59  NGR-RPWFEECQD 24
           NG+    FE+  D
Sbjct: 263 NGKWNSQFEQWMD 275


>emb|CAN64892.1| hypothetical protein VITISV_016441 [Vitis vinifera]
          Length = 1497

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 55/133 (41%), Positives = 79/133 (59%), Gaps = 7/133 (5%)
 Frame = -2

Query: 401  VRRMVISHLKSLQSIAKAHSQAQQIRVPRIDESCIYAEEKQFFSPKKM--LEDKD---TK 237
            +RR VI+ LK L S A   +Q  +  V   +ES   ++ ++F  PK++   E KD    +
Sbjct: 1218 LRRQVITTLKCLPSTANNQAQVNKRGVLTANESYKDSDNRKFLRPKELGGREIKDYVIEQ 1277

Query: 236  LGCKINENWDYSLFSKEDMQFSWLQRQEAITRRDRMKKYSFSHRERRN-HLIQEESSNKE 60
            L     ++WD S+  KEDM+  WL++QEA T+R+RMKKYS SHRER N  + +E  S KE
Sbjct: 1278 LEGXSKKSWDCSMLLKEDMEXIWLRKQEAXTKRERMKKYSSSHRERINAQMTEETESYKE 1337

Query: 59   NGR-RPWFEECQD 24
            NG+    FE+  D
Sbjct: 1338 NGKWNSQFEQWMD 1350



 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 50/125 (40%), Positives = 71/125 (56%), Gaps = 7/125 (5%)
 Frame = -2

Query: 401 VRRMVISHLKSLQSIAKAHSQAQQIRVPRIDESCIYAEEKQFFSPKKMLEDKDTK----- 237
           VRR  I+ LK L S A   +Q     V   +E+      ++F  PKK    ++ K     
Sbjct: 447 VRRQAITKLKCLPSTANTRAQVNIGGVLTTEETYKDGNNRKFLRPKKECGGREIKAYVIE 506

Query: 236 -LGCKINENWDYSLFSKEDMQFSWLQRQEAITRRDRMKKYSFSHRERRNHLIQEESS-NK 63
            L      +WDY++ S+ED++  WL++QEA+ RR+RMKKYS SHRER N  + EE+   K
Sbjct: 507 QLEGSGQRSWDYNILSQEDVETIWLRKQEALIRRERMKKYSSSHRERINAQMPEETEPYK 566

Query: 62  ENGRR 48
           ENGR+
Sbjct: 567 ENGRQ 571


>ref|NP_001233793.1| calmodulin binding protein SUN-like [Solanum lycopersicum]
           gi|133711812|gb|ABO36630.1| SUN [Solanum lycopersicum]
           gi|133711822|gb|ABO36639.1| SUN [Solanum lycopersicum]
           gi|169793984|gb|ACA81532.1| putative calmodulin binding
           protein SUN [Solanum lycopersicum]
          Length = 421

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 43/121 (35%), Positives = 77/121 (63%), Gaps = 1/121 (0%)
 Frame = -2

Query: 401 VRRMVISHLKSLQSI-AKAHSQAQQIRVPRIDESCIYAEEKQFFSPKKMLEDKDTKLGCK 225
           VR  +I+ LK +  +  K+ ++  QIRVP  ++   + ++K   SP+++++ K+ KL CK
Sbjct: 153 VRGRLIAKLKFMLPLHQKSKTRVNQIRVPTFED---HHDKKLINSPREIMKAKELKLKCK 209

Query: 224 INENWDYSLFSKEDMQFSWLQRQEAITRRDRMKKYSFSHRERRNHLIQEESSNKENGRRP 45
               W+++L S++D +  W +R+EAI +R+ + KYSFSHRERRN    ++  N++  RR 
Sbjct: 210 SLSTWNFNLASEQDSEALWSRREEAIDKREHLMKYSFSHRERRNDQTLQDLLNRKQNRRS 269

Query: 44  W 42
           +
Sbjct: 270 Y 270


Top