BLASTX nr result

ID: Panax21_contig00008874 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008874
         (529 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284118.1| PREDICTED: auxin-responsive protein IAA27 is...   220   9e-56
gb|ADL36581.1| ARF domain class transcription factor [Malus x do...   206   1e-51
ref|XP_002303297.1| predicted protein [Populus trichocarpa] gi|2...   203   1e-50
ref|XP_002284282.1| PREDICTED: auxin-responsive protein IAA27-li...   194   9e-48
ref|XP_002284128.1| PREDICTED: auxin-responsive protein IAA27 is...   193   1e-47

>ref|XP_002284118.1| PREDICTED: auxin-responsive protein IAA27 isoform 1 [Vitis
           vinifera]
          Length = 320

 Score =  220 bits (561), Expect = 9e-56
 Identities = 119/177 (67%), Positives = 130/177 (73%), Gaps = 4/177 (2%)
 Frame = -3

Query: 521 SGKWVFSGSGGSELDLVKNGALFSPRGING----VGGSESNSQPSVMSSNXXXXXXXXXX 354
           SGKWVFSGSGGSE DL K G LFSPRG NG    +GGSESN+Q S + +           
Sbjct: 89  SGKWVFSGSGGSETDLTKGGGLFSPRGGNGGGKHLGGSESNNQHSSLGTPVKNDVVPQSP 148

Query: 353 XXXXXXXXQISAANGHGVPSTAKAQVVGWPPIRSFRKNSMATNPPKNDDDADVKLGSGCL 174
                   QISA         AKAQVVGWPPIRSFRKNSMA+N PKND+DA+ KLGSGCL
Sbjct: 149 KPMHEKKPQISAP-------AAKAQVVGWPPIRSFRKNSMASNLPKNDEDAEGKLGSGCL 201

Query: 173 YVKVSMDGAPYLRKVDLKTFSSYLELSLGLEKMFSCFTIGQCGSHGVSARDGLSESR 3
           YVKVSMDGAPYLRKVDLK +S+Y+ELS  LEKMFSCFTIGQCGS+GV  RDGLSESR
Sbjct: 202 YVKVSMDGAPYLRKVDLKLYSTYMELSSALEKMFSCFTIGQCGSNGVPIRDGLSESR 258


>gb|ADL36581.1| ARF domain class transcription factor [Malus x domestica]
          Length = 319

 Score =  206 bits (525), Expect = 1e-51
 Identities = 113/178 (63%), Positives = 130/178 (73%), Gaps = 4/178 (2%)
 Frame = -3

Query: 524 SSGKWVFSGSGGSELDLVKNGALFSPRGING----VGGSESNSQPSVMSSNXXXXXXXXX 357
           +SGKWVFSGSGGSE++L K G L SPRG+N       G E ++QP+ ++ +         
Sbjct: 84  ASGKWVFSGSGGSEVELGKGGNLLSPRGVNAGKALAAGCEPSNQPTGLAGSAVKDGVQQS 143

Query: 356 XXXXXXXXXQISAANGHGVPSTAKAQVVGWPPIRSFRKNSMATNPPKNDDDADVKLGSGC 177
                    Q SA  G   P+ AKAQVVGWPPIRSFRKNSMA+ P KN DDA+ K+G+GC
Sbjct: 144 PKPLHEKKSQGSA--GSTAPA-AKAQVVGWPPIRSFRKNSMASVPSKNGDDAEGKMGAGC 200

Query: 176 LYVKVSMDGAPYLRKVDLKTFSSYLELSLGLEKMFSCFTIGQCGSHGVSARDGLSESR 3
           LYVKVSMDGAPYLRKVDLKT+ SYL+LSL LEKMFSCFTIGQCGSHG S RDGLSESR
Sbjct: 201 LYVKVSMDGAPYLRKVDLKTYGSYLDLSLALEKMFSCFTIGQCGSHGAS-RDGLSESR 257


>ref|XP_002303297.1| predicted protein [Populus trichocarpa] gi|222840729|gb|EEE78276.1|
           predicted protein [Populus trichocarpa]
          Length = 349

 Score =  203 bits (516), Expect = 1e-50
 Identities = 107/174 (61%), Positives = 124/174 (71%)
 Frame = -3

Query: 524 SSGKWVFSGSGGSELDLVKNGALFSPRGINGVGGSESNSQPSVMSSNXXXXXXXXXXXXX 345
           SSGKWVFSGS GSE+DL K   LFSPRG NG      NSQ S ++               
Sbjct: 120 SSGKWVFSGSNGSEVDLGKGAILFSPRGDNG------NSQKSCVAGPAKKDDVAQSPKPV 173

Query: 344 XXXXXQISAANGHGVPSTAKAQVVGWPPIRSFRKNSMATNPPKNDDDADVKLGSGCLYVK 165
                Q++AAN +     AKAQVVGWPPIRSFRKN+MA++  KN++D + K G GCLYVK
Sbjct: 174 QEKISQVAAANENSSAPAAKAQVVGWPPIRSFRKNTMASSLVKNNEDVEGKSGYGCLYVK 233

Query: 164 VSMDGAPYLRKVDLKTFSSYLELSLGLEKMFSCFTIGQCGSHGVSARDGLSESR 3
           VSMDGAPYLRKVDLKT+S+YLELS  LEKMFSCFTIGQCGSHG+  +DGL+ESR
Sbjct: 234 VSMDGAPYLRKVDLKTYSNYLELSSALEKMFSCFTIGQCGSHGLRGQDGLTESR 287


>ref|XP_002284282.1| PREDICTED: auxin-responsive protein IAA27-like isoform 1 [Vitis
           vinifera]
          Length = 343

 Score =  194 bits (492), Expect = 9e-48
 Identities = 108/177 (61%), Positives = 123/177 (69%), Gaps = 5/177 (2%)
 Frame = -3

Query: 521 SGKWVFSGSGGSELDLVKNGALFSPRGINGV---GGSESNS-QPSVMSSNXXXXXXXXXX 354
           SGKWVFS +GGSE+DL K   LFSPRG NGV   GG ++NS Q S M             
Sbjct: 105 SGKWVFSVNGGSEVDLGKGAVLFSPRGGNGVKPLGGLDNNSAQKSCMPGPAMKDVAAPSS 164

Query: 353 XXXXXXXXQ-ISAANGHGVPSTAKAQVVGWPPIRSFRKNSMATNPPKNDDDADVKLGSGC 177
                      SAAN H     AKAQVVGWPPIRSFRKN+MA++  KN++DA+ K G GC
Sbjct: 165 PKPVQEKKPQASAANEHASAPAAKAQVVGWPPIRSFRKNTMASSA-KNNEDAEGKSGLGC 223

Query: 176 LYVKVSMDGAPYLRKVDLKTFSSYLELSLGLEKMFSCFTIGQCGSHGVSARDGLSES 6
           LYVKVSMDGAPYLRKVDLK + +Y+ELS  LEKMFSCFTIGQCGSHG+  RDGL+ES
Sbjct: 224 LYVKVSMDGAPYLRKVDLKIYCNYMELSSALEKMFSCFTIGQCGSHGLPGRDGLTES 280


>ref|XP_002284128.1| PREDICTED: auxin-responsive protein IAA27 isoform 2 [Vitis
           vinifera]
          Length = 305

 Score =  193 bits (490), Expect = 1e-47
 Identities = 105/161 (65%), Positives = 116/161 (72%), Gaps = 4/161 (2%)
 Frame = -3

Query: 521 SGKWVFSGSGGSELDLVKNGALFSPRGING----VGGSESNSQPSVMSSNXXXXXXXXXX 354
           SGKWVFSGSGGSE DL K G LFSPRG NG    +GGSESN+Q S + +           
Sbjct: 89  SGKWVFSGSGGSETDLTKGGGLFSPRGGNGGGKHLGGSESNNQHSSLGTPVKNDVVPQSP 148

Query: 353 XXXXXXXXQISAANGHGVPSTAKAQVVGWPPIRSFRKNSMATNPPKNDDDADVKLGSGCL 174
                   QISA         AKAQVVGWPPIRSFRKNSMA+N PKND+DA+ KLGSGCL
Sbjct: 149 KPMHEKKPQISAP-------AAKAQVVGWPPIRSFRKNSMASNLPKNDEDAEGKLGSGCL 201

Query: 173 YVKVSMDGAPYLRKVDLKTFSSYLELSLGLEKMFSCFTIGQ 51
           YVKVSMDGAPYLRKVDLK +S+Y+ELS  LEKMFSCFTIG+
Sbjct: 202 YVKVSMDGAPYLRKVDLKLYSTYMELSSALEKMFSCFTIGK 242


Top