BLASTX nr result

ID: Panax21_contig00008847 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008847
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140074.1| PREDICTED: sorting and assembly machinery co...   119   3e-25
ref|XP_002273082.1| PREDICTED: sorting and assembly machinery co...   117   8e-25
emb|CBI25445.3| unnamed protein product [Vitis vinifera]              117   8e-25
emb|CAN84130.1| hypothetical protein VITISV_041873 [Vitis vinifera]   117   8e-25
ref|XP_002882713.1| outer membrane OMP85 family protein [Arabido...   115   3e-24

>ref|XP_004140074.1| PREDICTED: sorting and assembly machinery component 50 homolog
           [Cucumis sativus] gi|449490420|ref|XP_004158600.1|
           PREDICTED: sorting and assembly machinery component 50
           homolog [Cucumis sativus]
          Length = 536

 Score =  119 bits (297), Expect = 3e-25
 Identities = 55/81 (67%), Positives = 71/81 (87%)
 Frame = +3

Query: 3   KMKDQLIEAEIEALKIATTVQELIQASSIANARLQQLEIFDSVNITLDSGPPELPGTTNV 182
           K KD LIEAE+EA+K A+T+QEL++A+ +ANA+LQ+LEIFDSV ITLDSGPPELPGT NV
Sbjct: 95  KTKDSLIEAEVEAIKTASTMQELLEAAGVANAKLQRLEIFDSVKITLDSGPPELPGTANV 154

Query: 183 IVEVVETKNSVTGDLGIYSKP 245
           ++EVVET N ++G+ G Y+KP
Sbjct: 155 VIEVVETGNPLSGECGAYTKP 175


>ref|XP_002273082.1| PREDICTED: sorting and assembly machinery component 50 homolog
           B-like [Vitis vinifera]
          Length = 534

 Score =  117 bits (294), Expect = 8e-25
 Identities = 58/82 (70%), Positives = 68/82 (82%)
 Frame = +3

Query: 3   KMKDQLIEAEIEALKIATTVQELIQASSIANARLQQLEIFDSVNITLDSGPPELPGTTNV 182
           K KD LIEAE+EA+K ATT+QEL++A+ IAN R     IFDSV ITLD GPPELPGT NV
Sbjct: 94  KTKDSLIEAELEAIKNATTMQELLKAAGIANHRFHSFGIFDSVGITLDCGPPELPGTVNV 153

Query: 183 IVEVVETKNSVTGDLGIYSKPE 248
           IV+VVETKN +TGDLGI++KPE
Sbjct: 154 IVDVVETKNPLTGDLGIFTKPE 175


>emb|CBI25445.3| unnamed protein product [Vitis vinifera]
          Length = 464

 Score =  117 bits (294), Expect = 8e-25
 Identities = 58/82 (70%), Positives = 68/82 (82%)
 Frame = +3

Query: 3   KMKDQLIEAEIEALKIATTVQELIQASSIANARLQQLEIFDSVNITLDSGPPELPGTTNV 182
           K KD LIEAE+EA+K ATT+QEL++A+ IAN R     IFDSV ITLD GPPELPGT NV
Sbjct: 24  KTKDSLIEAELEAIKNATTMQELLKAAGIANHRFHSFGIFDSVGITLDCGPPELPGTVNV 83

Query: 183 IVEVVETKNSVTGDLGIYSKPE 248
           IV+VVETKN +TGDLGI++KPE
Sbjct: 84  IVDVVETKNPLTGDLGIFTKPE 105


>emb|CAN84130.1| hypothetical protein VITISV_041873 [Vitis vinifera]
          Length = 564

 Score =  117 bits (294), Expect = 8e-25
 Identities = 58/82 (70%), Positives = 68/82 (82%)
 Frame = +3

Query: 3   KMKDQLIEAEIEALKIATTVQELIQASSIANARLQQLEIFDSVNITLDSGPPELPGTTNV 182
           K KD LIEAE+EA+K ATT+QEL++A+ IAN R     IFDSV ITLD GPPELPGT NV
Sbjct: 94  KTKDSLIEAELEAIKNATTMQELLKAAGIANHRFHSFGIFDSVGITLDCGPPELPGTVNV 153

Query: 183 IVEVVETKNSVTGDLGIYSKPE 248
           IV+VVETKN +TGDLGI++KPE
Sbjct: 154 IVDVVETKNPLTGDLGIFTKPE 175


>ref|XP_002882713.1| outer membrane OMP85 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297328553|gb|EFH58972.1| outer membrane OMP85
           family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 515

 Score =  115 bits (289), Expect = 3e-24
 Identities = 53/82 (64%), Positives = 72/82 (87%)
 Frame = +3

Query: 3   KMKDQLIEAEIEALKIATTVQELIQASSIANARLQQLEIFDSVNITLDSGPPELPGTTNV 182
           K KD +IEAE++A++ ATT+QEL++AS +AN+ L+ LEIFDSVNITLDSGPPELPGTTNV
Sbjct: 84  KTKDHIIEAEVDAVREATTLQELLEASRVANSNLRALEIFDSVNITLDSGPPELPGTTNV 143

Query: 183 IVEVVETKNSVTGDLGIYSKPE 248
           ++EVVE+K+ +TG +G Y++ E
Sbjct: 144 VIEVVESKSPLTGQIGAYTRAE 165


Top