BLASTX nr result
ID: Panax21_contig00008837
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00008837
(1829 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279969.1| PREDICTED: SWI/SNF complex component SNF12 h... 715 0.0
ref|XP_004145668.1| PREDICTED: SWI/SNF complex component SNF12 h... 700 0.0
ref|XP_002273749.1| PREDICTED: SWI/SNF complex component SNF12 h... 700 0.0
emb|CAN60756.1| hypothetical protein VITISV_041986 [Vitis vinifera] 697 0.0
ref|XP_002298619.1| chromatin remodeling complex subunit [Populu... 685 0.0
>ref|XP_002279969.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Vitis vinifera]
Length = 546
Score = 715 bits (1845), Expect = 0.0
Identities = 362/536 (67%), Positives = 422/536 (78%), Gaps = 2/536 (0%)
Frame = +3
Query: 195 VGVPTVFGNSGALPQSMSMNHQIPPHLLGQSNSQTQSGSHFPGHFQLSEPXXXXXXXXXX 374
VG+ +V +SG + Q+M +NHQ PHLL QS QT G+HFPGHFQLSEP
Sbjct: 13 VGLGSV--SSGNVGQTMPLNHQ--PHLLSQSQPQTLGGTHFPGHFQLSEPQAQALAQTQY 68
Query: 375 XXXXXX-RVQAPHTQFQYPFQVQGQSHAQMQNPGINNVGGSSPLISTPGSGNAKRVPQKQ 551
+ QA H QFQ Q Q QS AQ+ + G +N+G SSP +STPG+G+AKR QK
Sbjct: 69 AQAHAQAQAQAAHAQFQAQLQAQAQSLAQLHSAGTSNLGVSSPSVSTPGTGSAKRGSQKP 128
Query: 552 XXXXXXXXXXXXXXX-LKTMELTPAARRKKQKLPEKQIPDKVAALLPESALYTQLLEFES 728
KTMELTPAARRKK KLPEKQIPDK+AAL+PESA+YTQL+E E+
Sbjct: 129 PSRPHGSANATNPASPFKTMELTPAARRKKPKLPEKQIPDKIAALVPESAIYTQLVELEA 188
Query: 729 RVDAALARKKIDIQESLKSTPCVQRILRIYVFNTYANQTQRLLEKPNAEPASWSLKMIGR 908
RVDAALARKK DIQESLK+ VQ+ LRIYVFNT+ANQT+ EK NAEP SW+LK+IGR
Sbjct: 189 RVDAALARKKTDIQESLKNPHRVQKTLRIYVFNTFANQTRMNPEKTNAEPPSWTLKIIGR 248
Query: 909 VLDDATDPGAAGMVQSSSAPYPKFSSFFKKITIYLDQSLYPDNHVILWDSSRSPALHEGF 1088
+L+D DP AG S+ YPKFSSFFKK+TIYLDQ LYPDNHVILW+++RSP LHEGF
Sbjct: 249 ILEDGVDPVLAGTSDKLSSSYPKFSSFFKKMTIYLDQGLYPDNHVILWENARSPTLHEGF 308
Query: 1089 EVKRKGDTEFTAIIRLEMNYVPDKFKLSQALTEVLGIEVGTRPRIIAAIWHYVKARKLQI 1268
EV+RKGD EF AIIRLEMNYVP+KFKLS AL+EVLG+EV TRPRI+AAIWHYVK+RKLQ
Sbjct: 309 EVQRKGDKEFNAIIRLEMNYVPEKFKLSTALSEVLGLEVDTRPRIVAAIWHYVKSRKLQN 368
Query: 1269 TSDPTFFMCDPPLKKVFGEDKLKFGMVPHKISQHLTPPQPIHLEHKIKLSGNSPAGNTCY 1448
+DP+FF+CDPPL+KVFGE+K+KF MVP KIS HL+PPQPIHLEHK+KLSGNSPAG TCY
Sbjct: 369 PNDPSFFVCDPPLRKVFGEEKIKFAMVPQKISHHLSPPQPIHLEHKVKLSGNSPAGTTCY 428
Query: 1449 DVLVDIPLSLDKEMSNFLGNLEKHKEIDACDDAISSALKKIHEHRRRRAFFLGFSQSPTE 1628
DVLVD+PL L+KEMS FL N E+HKEIDA D+ I +++KKI EH RRRAFFLGFS SP E
Sbjct: 429 DVLVDVPLPLEKEMSAFLANTERHKEIDAYDETICASIKKIQEHNRRRAFFLGFSHSPAE 488
Query: 1629 FINALIASQSKDLKLLAGDGSRNAEKEHRSDFYNQPWLEDAVIRYLNRKPAAGNDA 1796
FINALI SQS+DLKL+AGD SRNAEKE R+DFYNQPW++DAVIRYLNRKPA G +A
Sbjct: 489 FINALITSQSRDLKLVAGDASRNAEKERRADFYNQPWVDDAVIRYLNRKPAPGMEA 544
>ref|XP_004145668.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Cucumis sativus]
gi|449515744|ref|XP_004164908.1| PREDICTED: SWI/SNF
complex component SNF12 homolog [Cucumis sativus]
Length = 547
Score = 700 bits (1806), Expect = 0.0
Identities = 350/532 (65%), Positives = 406/532 (76%)
Frame = +3
Query: 213 FGNSGALPQSMSMNHQIPPHLLGQSNSQTQSGSHFPGHFQLSEPXXXXXXXXXXXXXXXX 392
FGNSG +P SM+ N Q Q Q G+ F F L+
Sbjct: 20 FGNSGMVPPSMAANSTS----FSQPQPQAQLGAGFQNPFPLTTAQVLAQAQYKAHAHAQA 75
Query: 393 RVQAPHTQFQYPFQVQGQSHAQMQNPGINNVGGSSPLISTPGSGNAKRVPQKQXXXXXXX 572
+ QA H QFQ Q QG S Q QN G NVG SP STPG KR+PQK
Sbjct: 76 QAQAAHAQFQAQLQAQGLSLTQSQNVGGGNVGSPSPGFSTPGLAGVKRIPQKPPVRPPIL 135
Query: 573 XXXXXXXXLKTMELTPAARRKKQKLPEKQIPDKVAALLPESALYTQLLEFESRVDAALAR 752
LKTMELTPAAR+KKQKLPEKQ+ DKVAA+LPESALYTQLLEFESRVDAALAR
Sbjct: 136 SPGTTFSPLKTMELTPAARKKKQKLPEKQLQDKVAAILPESALYTQLLEFESRVDAALAR 195
Query: 753 KKIDIQESLKSTPCVQRILRIYVFNTYANQTQRLLEKPNAEPASWSLKMIGRVLDDATDP 932
KK+DI E+LK+ PC+Q+ LRIYVFNT+ANQ + +KPNA+P +W+LK+IGR+L+D DP
Sbjct: 196 KKVDIHEALKNPPCIQKTLRIYVFNTFANQVNTIPKKPNADPPTWTLKIIGRILEDGIDP 255
Query: 933 GAAGMVQSSSAPYPKFSSFFKKITIYLDQSLYPDNHVILWDSSRSPALHEGFEVKRKGDT 1112
G+VQ S+ YPKFSSFFK++TI LDQ LYPD+H+I+W+++RSPA HEGFEVKRKGD
Sbjct: 256 DHPGVVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIVWENARSPAPHEGFEVKRKGDK 315
Query: 1113 EFTAIIRLEMNYVPDKFKLSQALTEVLGIEVGTRPRIIAAIWHYVKARKLQITSDPTFFM 1292
EF+ IRLEMNY+P+KFKLS AL EVLGIEV TRPRIIAAIWHYVKARKLQ +DP+FF
Sbjct: 316 EFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPNDPSFFH 375
Query: 1293 CDPPLKKVFGEDKLKFGMVPHKISQHLTPPQPIHLEHKIKLSGNSPAGNTCYDVLVDIPL 1472
CDPPL+KVFGEDKLKF MV +ISQHL PPQPIHLEHK+KLSGNSPAG CYDVLVD+P
Sbjct: 376 CDPPLQKVFGEDKLKFTMVSQRISQHLFPPQPIHLEHKVKLSGNSPAGTACYDVLVDVPF 435
Query: 1473 SLDKEMSNFLGNLEKHKEIDACDDAISSALKKIHEHRRRRAFFLGFSQSPTEFINALIAS 1652
+ +E+S L N EK+KEIDACD+AI +A++KIHEHRRRRAFFLGFSQSP EFI+ALI S
Sbjct: 436 PIHRELSALLANAEKNKEIDACDEAICTAIRKIHEHRRRRAFFLGFSQSPVEFIDALIES 495
Query: 1653 QSKDLKLLAGDGSRNAEKEHRSDFYNQPWLEDAVIRYLNRKPAAGNDAPGST 1808
QSKDLKLLAG+ SRNAEKE RSDF+NQPW+EDAVIRY+NRKPA G+DAPGST
Sbjct: 496 QSKDLKLLAGEASRNAEKERRSDFFNQPWVEDAVIRYINRKPATGSDAPGST 547
>ref|XP_002273749.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Vitis vinifera]
Length = 548
Score = 700 bits (1806), Expect = 0.0
Identities = 354/535 (66%), Positives = 407/535 (76%), Gaps = 3/535 (0%)
Frame = +3
Query: 213 FGNSGALPQSMSMNHQIPPHLLGQSNSQTQSGSHFPGHFQLSEPXXXXXXXXXXXXXXXX 392
FGN+G +M N + Q +Q Q G F G FQLS+
Sbjct: 19 FGNAGMGSPAMPANP-----VFSQPQAQGQIGGGFQGQFQLSQAHQAHVIAQAHSKAQAH 73
Query: 393 ---RVQAPHTQFQYPFQVQGQSHAQMQNPGINNVGGSSPLISTPGSGNAKRVPQKQXXXX 563
+ QA H QFQ Q QG + Q Q GI N+GGSSP I PG+ N KR QK
Sbjct: 74 AQAQAQAAHAQFQAQLQAQGMTLNQSQGIGIGNMGGSSPSIGAPGNSNMKRTLQKPPVRP 133
Query: 564 XXXXXXXXXXXLKTMELTPAARRKKQKLPEKQIPDKVAALLPESALYTQLLEFESRVDAA 743
LK MELTPAARRKKQKLPEKQ+ D+VAA+LPESALYTQLLEFESRVDAA
Sbjct: 134 PGPLGANTISPLKVMELTPAARRKKQKLPEKQLQDRVAAILPESALYTQLLEFESRVDAA 193
Query: 744 LARKKIDIQESLKSTPCVQRILRIYVFNTYANQTQRLLEKPNAEPASWSLKMIGRVLDDA 923
LARKKIDIQE+LK+ PCVQ+ LRIY+FNT+ANQ + + +KPNAEP +W+LK+IGR+L++
Sbjct: 194 LARKKIDIQEALKNPPCVQKTLRIYIFNTFANQIRTIPKKPNAEPPTWTLKIIGRILEEG 253
Query: 924 TDPGAAGMVQSSSAPYPKFSSFFKKITIYLDQSLYPDNHVILWDSSRSPALHEGFEVKRK 1103
DP A M+ S+ YPKFSSFFK++TI LDQ LYPDN +I+W+++RSPA HEGFEVKRK
Sbjct: 254 VDPDQAAMLHKSNVSYPKFSSFFKRVTISLDQRLYPDNPIIIWENARSPAPHEGFEVKRK 313
Query: 1104 GDTEFTAIIRLEMNYVPDKFKLSQALTEVLGIEVGTRPRIIAAIWHYVKARKLQITSDPT 1283
GD EFT IRLEMNYVP+KFKLS AL EVLGIEV TRPRIIAAIWHYVKARKLQ +DP+
Sbjct: 314 GDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPNDPS 373
Query: 1284 FFMCDPPLKKVFGEDKLKFGMVPHKISQHLTPPQPIHLEHKIKLSGNSPAGNTCYDVLVD 1463
FF CDPPL+KVFGEDK+KF MV KISQHL+PPQPIHLEHKIKLSGN PAGN CYDVLVD
Sbjct: 374 FFNCDPPLQKVFGEDKMKFTMVSQKISQHLSPPQPIHLEHKIKLSGNCPAGNACYDVLVD 433
Query: 1464 IPLSLDKEMSNFLGNLEKHKEIDACDDAISSALKKIHEHRRRRAFFLGFSQSPTEFINAL 1643
+P + KE+S L N EK+KEIDACD+AI SA++KIHEHRRRRAFFLGFSQSP EFIN L
Sbjct: 434 VPFPIQKELSALLANTEKNKEIDACDEAICSAIRKIHEHRRRRAFFLGFSQSPVEFINTL 493
Query: 1644 IASQSKDLKLLAGDGSRNAEKEHRSDFYNQPWLEDAVIRYLNRKPAAGNDAPGST 1808
I SQSKDLKL+AG+ SRNAEKE RSDF+NQPW+EDAVIRYLNRKP AG+DAPGST
Sbjct: 494 IESQSKDLKLVAGEASRNAEKERRSDFFNQPWVEDAVIRYLNRKPVAGSDAPGST 548
>emb|CAN60756.1| hypothetical protein VITISV_041986 [Vitis vinifera]
Length = 548
Score = 697 bits (1800), Expect = 0.0
Identities = 353/535 (65%), Positives = 406/535 (75%), Gaps = 3/535 (0%)
Frame = +3
Query: 213 FGNSGALPQSMSMNHQIPPHLLGQSNSQTQSGSHFPGHFQLSEPXXXXXXXXXXXXXXXX 392
FGN+G +M N + Q +Q Q G F G FQLS+
Sbjct: 19 FGNAGMGSPAMPANP-----VFSQPQAQGQIGGGFQGQFQLSQAHQAHVIAQAHSKAQAH 73
Query: 393 ---RVQAPHTQFQYPFQVQGQSHAQMQNPGINNVGGSSPLISTPGSGNAKRVPQKQXXXX 563
+ QA H QFQ Q QG + Q Q GI N+GGSSP I PG+ N KR QK
Sbjct: 74 AQAQAQAAHAQFQAQLQAQGMTLNQSQGIGIGNMGGSSPSIGAPGNSNMKRXLQKPPVRP 133
Query: 564 XXXXXXXXXXXLKTMELTPAARRKKQKLPEKQIPDKVAALLPESALYTQLLEFESRVDAA 743
LK MELTPAARRKKQKLPEKQ+ D+VAA+LPESALYTQLLEFESRVDAA
Sbjct: 134 PGPLGANTISPLKVMELTPAARRKKQKLPEKQLQDRVAAILPESALYTQLLEFESRVDAA 193
Query: 744 LARKKIDIQESLKSTPCVQRILRIYVFNTYANQTQRLLEKPNAEPASWSLKMIGRVLDDA 923
LARKKIDIQE+LK+ PCVQ+ LRIY+FNT+ NQ + + +KPNAEP +W+LK+IGR+L++
Sbjct: 194 LARKKIDIQEALKNPPCVQKTLRIYIFNTFXNQIRTIPKKPNAEPPTWTLKIIGRILEEG 253
Query: 924 TDPGAAGMVQSSSAPYPKFSSFFKKITIYLDQSLYPDNHVILWDSSRSPALHEGFEVKRK 1103
DP A M+ S+ YPKFSSFFK++TI LDQ LYPDN +I+W+++RSPA HEGFEVKRK
Sbjct: 254 VDPDQAAMLHKSNVSYPKFSSFFKRVTISLDQRLYPDNPIIIWENARSPAPHEGFEVKRK 313
Query: 1104 GDTEFTAIIRLEMNYVPDKFKLSQALTEVLGIEVGTRPRIIAAIWHYVKARKLQITSDPT 1283
GD EFT IRLEMNYVP+KFKLS AL EVLGIEV TRPRIIAAIWHYVKARKLQ +DP+
Sbjct: 314 GDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPNDPS 373
Query: 1284 FFMCDPPLKKVFGEDKLKFGMVPHKISQHLTPPQPIHLEHKIKLSGNSPAGNTCYDVLVD 1463
FF CDPPL+KVFGEDK+KF MV KISQHL+PPQPIHLEHKIKLSGN PAGN CYDVLVD
Sbjct: 374 FFNCDPPLQKVFGEDKMKFTMVSQKISQHLSPPQPIHLEHKIKLSGNCPAGNACYDVLVD 433
Query: 1464 IPLSLDKEMSNFLGNLEKHKEIDACDDAISSALKKIHEHRRRRAFFLGFSQSPTEFINAL 1643
+P + KE+S L N EK+KEIDACD+AI SA++KIHEHRRRRAFFLGFSQSP EFIN L
Sbjct: 434 VPFPIQKELSALLANTEKNKEIDACDEAICSAIRKIHEHRRRRAFFLGFSQSPVEFINTL 493
Query: 1644 IASQSKDLKLLAGDGSRNAEKEHRSDFYNQPWLEDAVIRYLNRKPAAGNDAPGST 1808
I SQSKDLKL+AG+ SRNAEKE RSDF+NQPW+EDAVIRYLNRKP AG+DAPGST
Sbjct: 494 IESQSKDLKLVAGEASRNAEKERRSDFFNQPWVEDAVIRYLNRKPVAGSDAPGST 548
>ref|XP_002298619.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222845877|gb|EEE83424.1| chromatin remodeling complex
subunit [Populus trichocarpa]
Length = 555
Score = 685 bits (1767), Expect = 0.0
Identities = 348/539 (64%), Positives = 408/539 (75%), Gaps = 8/539 (1%)
Frame = +3
Query: 213 FGNSGALPQSMSMNHQIPPHLLGQSNSQTQSGSHFPG-HFQLSEPXXXXXXXXXXXXXXX 389
FGNSG + SM N P +Q Q G+ F G FQLS+
Sbjct: 23 FGNSGMVNPSMGANPTFP-------QAQAQMGAGFQGGQFQLSQAQATLQAHLKAQQAHA 75
Query: 390 X-------RVQAPHTQFQYPFQVQGQSHAQMQNPGINNVGGSSPLISTPGSGNAKRVPQK 548
+VQA H QFQ Q QG S Q Q+ GI N+G SSP STPG+ +AKR+PQK
Sbjct: 76 QAQAAHAAQVQAAHAQFQAQLQAQGVSLNQNQSAGIGNLGSSSPSFSTPGNASAKRLPQK 135
Query: 549 QXXXXXXXXXXXXXXXLKTMELTPAARRKKQKLPEKQIPDKVAALLPESALYTQLLEFES 728
LK M+L+ AARRKKQKLPEKQ+ D+VAA+LPESALYTQLLEFE+
Sbjct: 136 PLGRPPGVPMSSMVSPLKPMDLSSAARRKKQKLPEKQLQDRVAAILPESALYTQLLEFET 195
Query: 729 RVDAALARKKIDIQESLKSTPCVQRILRIYVFNTYANQTQRLLEKPNAEPASWSLKMIGR 908
RVDAALARKK+DIQE+LKS PCVQ+ LRIYVFNT+ANQ + + +KPNA+P +W+LK+IGR
Sbjct: 196 RVDAALARKKVDIQEALKSPPCVQKTLRIYVFNTFANQIRTIPKKPNADPPTWTLKVIGR 255
Query: 909 VLDDATDPGAAGMVQSSSAPYPKFSSFFKKITIYLDQSLYPDNHVILWDSSRSPALHEGF 1088
+L+D DP G VQ S+ YPKFSSFFK+++I LDQ LYPDNH+I+W+ +RSPA HEGF
Sbjct: 256 ILEDGVDPDQPGAVQKSNPLYPKFSSFFKRVSIQLDQRLYPDNHIIIWEHARSPAPHEGF 315
Query: 1089 EVKRKGDTEFTAIIRLEMNYVPDKFKLSQALTEVLGIEVGTRPRIIAAIWHYVKARKLQI 1268
EVKRKGD EF+ IRLEMNYVP+KFKLS AL EVLGIEV TRPRIIAAIWHYVKARKLQ
Sbjct: 316 EVKRKGDKEFSVNIRLEMNYVPEKFKLSPALMEVLGIEVETRPRIIAAIWHYVKARKLQN 375
Query: 1269 TSDPTFFMCDPPLKKVFGEDKLKFGMVPHKISQHLTPPQPIHLEHKIKLSGNSPAGNTCY 1448
DP+FF CD PL+KVFGE K+KF MV +ISQHL+PPQPIHLEHKIKLSGNSPAG CY
Sbjct: 376 PEDPSFFNCDAPLQKVFGESKMKFTMVSQRISQHLSPPQPIHLEHKIKLSGNSPAGTVCY 435
Query: 1449 DVLVDIPLSLDKEMSNFLGNLEKHKEIDACDDAISSALKKIHEHRRRRAFFLGFSQSPTE 1628
DV+VD+P + +E+S L N EK+KEID CD+AI +A++KIHEHRRRRAFFLGFSQSP E
Sbjct: 436 DVVVDVPFPIQRELSALLANAEKNKEIDTCDEAICTAIRKIHEHRRRRAFFLGFSQSPVE 495
Query: 1629 FINALIASQSKDLKLLAGDGSRNAEKEHRSDFYNQPWLEDAVIRYLNRKPAAGNDAPGS 1805
F+NALI SQSKDLKL+AG+ SRNAEKE RSDF+NQPW+EDAVIRYLNRKPAAG+DAP S
Sbjct: 496 FVNALIESQSKDLKLVAGEASRNAEKERRSDFFNQPWVEDAVIRYLNRKPAAGSDAPRS 554