BLASTX nr result

ID: Panax21_contig00008833 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008833
         (836 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27035.3| unnamed protein product [Vitis vinifera]              236   5e-60
ref|XP_002529123.1| DNA binding protein, putative [Ricinus commu...   228   2e-57
ref|XP_003614539.1| Agenet and bromo-adjacent homology (BAH) dom...   224   1e-56
ref|XP_003614538.1| Agenet and bromo-adjacent homology (BAH) dom...   224   1e-56
ref|XP_002314870.1| predicted protein [Populus trichocarpa] gi|2...   224   2e-56

>emb|CBI27035.3| unnamed protein product [Vitis vinifera]
          Length = 347

 Score =  236 bits (602), Expect = 5e-60
 Identities = 129/250 (51%), Positives = 157/250 (62%), Gaps = 4/250 (1%)
 Frame = +3

Query: 18  KEEVTQNHQQPLIMGAQVEVLSQDSGIRGCWFRALIIXXXXXXXXXXXXXIKDAVDEVNN 197
           KE + Q   Q L +G+QVEVLSQDSGIRGCW RALII             I DA DE +N
Sbjct: 52  KEAIIQKLPQFLAIGSQVEVLSQDSGIRGCWLRALIIKKHRCKVKVRYQDIMDAADETSN 111

Query: 198 LEEWILASRIAIPDKWSLRSCGRTTIRPAPLFGKDG-VAWVVKNGSVVDVWWHDCWWEGI 374
           LEEWILASR+A+PD+  LR CGRTTIRP P     G V+W    GSVVD WWHD WWEGI
Sbjct: 112 LEEWILASRVAVPDESGLRICGRTTIRPPPPGSNKGRVSWAFDVGSVVDAWWHDGWWEGI 171

Query: 375 VIRKESEDKIHVYFPAEKKISIFALKDLRPSQEWLGTGWIQIKERPELVTSILSDLERKL 554
           V++KESED+IHVYFP EK+  +F   DLR S+EW    W  +KERP+LVTSILS  E K 
Sbjct: 172 VVQKESEDRIHVYFPGEKQELVFGRSDLRHSEEWYENSWKHMKERPDLVTSILSGRESKH 231

Query: 555 NVVISCDERSAPHRASTCDY---DNELVSYVHKDAFLISNTVNETSMVRNLAKDDLLAQL 725
            V  S D + A  + + CD      +    V+      ++ +     V +L KDD L+QL
Sbjct: 232 VVSKSSDGKLA--QTAICDIGWSKKDEGGCVNSQLDSGNDKLKGLGFVPDLLKDDTLSQL 289

Query: 726 RWKSSRKRIR 755
           +WK+SRKR R
Sbjct: 290 KWKTSRKRRR 299


>ref|XP_002529123.1| DNA binding protein, putative [Ricinus communis]
            gi|223531402|gb|EEF33236.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 685

 Score =  228 bits (580), Expect = 2e-57
 Identities = 129/270 (47%), Positives = 168/270 (62%), Gaps = 4/270 (1%)
 Frame = +3

Query: 33   QNHQQPLIMGAQVEVLSQDSGIRGCWFRALIIXXXXXXXXXXXXXIKDAVDEVNNLEEWI 212
            QN  Q L +G++VEVLSQDSGIRGCWFRALII             IKDA +E NNLEEWI
Sbjct: 379  QNPLQYLKVGSKVEVLSQDSGIRGCWFRALIIKVHKSKVKVRYEDIKDAENEANNLEEWI 438

Query: 213  LASRIAIPDKWSLRSCGRTTIRPAPLFGKDGVAWVVKNGSVVDVWWHDCWWEGIVIRKES 392
            L +R+A+ D    R CGR  IRP P   K  V W  + G+ VDVWWHD W EGIV+ +ES
Sbjct: 439  LTTRVAVSDDLGFRVCGRPIIRPLPKCNKGRVLWGFEVGTAVDVWWHDVWQEGIVVSEES 498

Query: 393  EDKIHVYFPAEKKISIFALKDLRPSQEWLGTGWIQIKERPELVTSILSDLERKLNVVISC 572
            E + HVYFP EK+  +F   DLR SQEWLG  W+ +K RP+++TS+ S L+++  VV S 
Sbjct: 499  EHRFHVYFPGEKQELVFGCADLRHSQEWLGNRWMHLKCRPDILTSLSSFLDKQ--VVKSN 556

Query: 573  DERSAPHRASTCD-YDNELVSYVHKDAFLISNT--VNETSMVRNLAKDDLLAQLRWKSSR 743
            + +S  +    CD   +E       D  L S +    E  +VR+L KDD LAQLRW SS+
Sbjct: 557  ESKSIEN--GICDTRQSEKFKTGCPDDLLDSGSDGDGELKVVRDLLKDDRLAQLRWNSSK 614

Query: 744  KRIRGRN-SSQKLYDGDSKNKSSVKVLGTR 830
            KR R    S+Q+++  +S  KSS +V+ +R
Sbjct: 615  KRRRSSGISTQRMHPKESGGKSSSEVISSR 644


>ref|XP_003614539.1| Agenet and bromo-adjacent homology (BAH) domain-containing
           protein-like protein [Medicago truncatula]
           gi|355515874|gb|AES97497.1| Agenet and bromo-adjacent
           homology (BAH) domain-containing protein-like protein
           [Medicago truncatula]
          Length = 502

 Score =  224 bits (572), Expect = 1e-56
 Identities = 131/273 (47%), Positives = 163/273 (59%), Gaps = 3/273 (1%)
 Frame = +3

Query: 12  TTKEEVTQNHQQPLIMGAQVEVLSQDSGIRGCWFRALIIXXXXXXXXXXXXXIKDAVDEV 191
           T KE  T    Q L +G+ VEVLSQDSGIRGCWFRA +I             I+DA DE 
Sbjct: 194 TIKE--TNEASQYLAVGSNVEVLSQDSGIRGCWFRASVIKRHKDKVKVQYHDIQDAEDEA 251

Query: 192 NNLEEWILASRIAIPDKWSLRSCGRTTIRPAPLFGKDGVAWVVKNGSVVDVWWHDCWWEG 371
           NNLEEWILASR  +PD   LR   RT IRP  L  K G+++V   G +VD WWHD WWEG
Sbjct: 252 NNLEEWILASRPVVPDDLGLRVEERTKIRP--LLEKRGISFVGDVGYIVDAWWHDGWWEG 309

Query: 372 IVIRKESEDKIHVYFPAEKKISIFALKDLRPSQEWLGTGWIQIKERPELVTSILSDLERK 551
           IV++KES+DK HVYFP EKK+SIF   +LR S++W G GW++++ERP++VT  LS L+ K
Sbjct: 310 IVVQKESDDKYHVYFPGEKKMSIFGPCNLRHSRDWTGNGWVKVRERPDIVTCKLSSLKAK 369

Query: 552 LNVVISCDERSAPHRASTCDYDNELVSYVHKDAFLIS---NTVNETSMVRNLAKDDLLAQ 722
            +   SC  +S     ST     + +     DA+  S   + + +   V +L KD L  Q
Sbjct: 370 QS---SC--KSEEDSKSTVASIGDGIQSKQADAYSGSSERDKLRKNEEVPDLVKDVLSLQ 424

Query: 723 LRWKSSRKRIRGRNSSQKLYDGDSKNKSSVKVL 821
           LRWKSSRKR R   S QK    D   K S K L
Sbjct: 425 LRWKSSRKRNRSGTSQQKQQSNDIHRKLSPKFL 457


>ref|XP_003614538.1| Agenet and bromo-adjacent homology (BAH) domain-containing
            protein-like protein [Medicago truncatula]
            gi|355515873|gb|AES97496.1| Agenet and bromo-adjacent
            homology (BAH) domain-containing protein-like protein
            [Medicago truncatula]
          Length = 685

 Score =  224 bits (572), Expect = 1e-56
 Identities = 131/273 (47%), Positives = 163/273 (59%), Gaps = 3/273 (1%)
 Frame = +3

Query: 12   TTKEEVTQNHQQPLIMGAQVEVLSQDSGIRGCWFRALIIXXXXXXXXXXXXXIKDAVDEV 191
            T KE  T    Q L +G+ VEVLSQDSGIRGCWFRA +I             I+DA DE 
Sbjct: 377  TIKE--TNEASQYLAVGSNVEVLSQDSGIRGCWFRASVIKRHKDKVKVQYHDIQDAEDEA 434

Query: 192  NNLEEWILASRIAIPDKWSLRSCGRTTIRPAPLFGKDGVAWVVKNGSVVDVWWHDCWWEG 371
            NNLEEWILASR  +PD   LR   RT IRP  L  K G+++V   G +VD WWHD WWEG
Sbjct: 435  NNLEEWILASRPVVPDDLGLRVEERTKIRP--LLEKRGISFVGDVGYIVDAWWHDGWWEG 492

Query: 372  IVIRKESEDKIHVYFPAEKKISIFALKDLRPSQEWLGTGWIQIKERPELVTSILSDLERK 551
            IV++KES+DK HVYFP EKK+SIF   +LR S++W G GW++++ERP++VT  LS L+ K
Sbjct: 493  IVVQKESDDKYHVYFPGEKKMSIFGPCNLRHSRDWTGNGWVKVRERPDIVTCKLSSLKAK 552

Query: 552  LNVVISCDERSAPHRASTCDYDNELVSYVHKDAFLIS---NTVNETSMVRNLAKDDLLAQ 722
             +   SC  +S     ST     + +     DA+  S   + + +   V +L KD L  Q
Sbjct: 553  QS---SC--KSEEDSKSTVASIGDGIQSKQADAYSGSSERDKLRKNEEVPDLVKDVLSLQ 607

Query: 723  LRWKSSRKRIRGRNSSQKLYDGDSKNKSSVKVL 821
            LRWKSSRKR R   S QK    D   K S K L
Sbjct: 608  LRWKSSRKRNRSGTSQQKQQSNDIHRKLSPKFL 640


>ref|XP_002314870.1| predicted protein [Populus trichocarpa] gi|222863910|gb|EEF01041.1|
            predicted protein [Populus trichocarpa]
          Length = 598

 Score =  224 bits (570), Expect = 2e-56
 Identities = 125/268 (46%), Positives = 162/268 (60%), Gaps = 5/268 (1%)
 Frame = +3

Query: 24   EVTQNHQQPLIMGAQVEVLSQDSGIRGCWFRALIIXXXXXXXXXXXXXIKDAVDEVNNLE 203
            EV QN Q  L + ++VEVLSQDSGIRGCWFRA II             I DA DE N LE
Sbjct: 288  EVMQNPQN-LHVDSEVEVLSQDSGIRGCWFRASIIKKHKDKVKVRYQDISDAADEANKLE 346

Query: 204  EWILASRIAIPDKWSLRSCGRTTIRPAPLFGKDGVAWVVKNGSVVDVWWHDCWWEGIVIR 383
            EW+LASR+A PD+ ++R  GRT +RP P F K+  A V   G+ VD WW+D WWEG+V++
Sbjct: 347  EWVLASRVAAPDQLAIRIGGRTVVRPTPQFNKERAASVADVGTAVDAWWNDAWWEGVVVQ 406

Query: 384  KESEDKIHVYFPAEKKISIFALKDLRPSQEWLGTGWIQIKERPELVTSILSDLERKLNVV 563
            KESED+IHV+FP EKK S+F   DLR SQEW+G  WI I+ RP++++ + S  ERK  + 
Sbjct: 407  KESEDRIHVFFPGEKKESVFCCSDLRLSQEWVGNEWIHIEGRPDILSHLSSCWERK-QLK 465

Query: 564  ISCDERSAPHRASTCDYDNELVSYVHKDAFLIS--NTVNETSMVRNLAKDDLLAQLRWKS 737
               DE      A      +   +    D  L S  +   E  +V +L+KD+LLAQLRW+S
Sbjct: 466  FRSDESKLAQAAIPDSRQSGKANPGCIDYSLDSGCDMGKELKVVPDLSKDNLLAQLRWRS 525

Query: 738  SRKRIRGRNSS---QKLYDGDSKNKSSV 812
             +KR RG  SS     LY+   +  S V
Sbjct: 526  IKKRRRGSGSSGHKMHLYNNGGRRLSEV 553


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