BLASTX nr result

ID: Panax21_contig00008830 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008830
         (548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267673.1| PREDICTED: probable importin subunit beta-4 ...   231   7e-59
emb|CAN76102.1| hypothetical protein VITISV_007422 [Vitis vinifera]   231   7e-59
ref|XP_002312242.1| predicted protein [Populus trichocarpa] gi|2...   224   5e-57
ref|XP_002315055.1| predicted protein [Populus trichocarpa] gi|2...   223   2e-56
ref|XP_003547537.1| PREDICTED: probable importin subunit beta-4-...   220   1e-55

>ref|XP_002267673.1| PREDICTED: probable importin subunit beta-4 [Vitis vinifera]
            gi|298204504|emb|CBI23779.3| unnamed protein product
            [Vitis vinifera]
          Length = 1048

 Score =  231 bits (588), Expect = 7e-59
 Identities = 116/148 (78%), Positives = 127/148 (85%)
 Frame = -2

Query: 544  LKYYGDILRSLYPLFGESEPDDAVRDNAAGAVARMIMVHPDSVPLNQXXXXXXXXXXXKE 365
            LKYYGDILR LYPLFGESEPDDAVRDNAAGAVARMIMVHP+++PLNQ           KE
Sbjct: 901  LKYYGDILRGLYPLFGESEPDDAVRDNAAGAVARMIMVHPEAIPLNQVLPVFLKVLPLKE 960

Query: 364  DHEESMAVYSCVCNLVLSSNSQMLALVPDLVNLFAHVAISPVETPEVKAQIGRAFSHLIS 185
            D EES+AV++CVCNLV++SN Q+LALVPDLVNLFA VA SPVET EVKAQ+GRAFSHLIS
Sbjct: 961  DREESIAVFTCVCNLVVASNPQILALVPDLVNLFAQVAASPVETSEVKAQVGRAFSHLIS 1020

Query: 184  LYGNQMQPLLGNLSPTHANALAAIAPNS 101
            LYG+QMQPLL NLSP HANALAA AP S
Sbjct: 1021 LYGHQMQPLLSNLSPVHANALAAFAPKS 1048


>emb|CAN76102.1| hypothetical protein VITISV_007422 [Vitis vinifera]
          Length = 1028

 Score =  231 bits (588), Expect = 7e-59
 Identities = 116/148 (78%), Positives = 127/148 (85%)
 Frame = -2

Query: 544  LKYYGDILRSLYPLFGESEPDDAVRDNAAGAVARMIMVHPDSVPLNQXXXXXXXXXXXKE 365
            LKYYGDILR LYPLFGESEPDDAVRDNAAGAVARMIMVHP+++PLNQ           KE
Sbjct: 881  LKYYGDILRGLYPLFGESEPDDAVRDNAAGAVARMIMVHPEAIPLNQVLPVFLKVLPLKE 940

Query: 364  DHEESMAVYSCVCNLVLSSNSQMLALVPDLVNLFAHVAISPVETPEVKAQIGRAFSHLIS 185
            D EES+AV++CVCNLV++SN Q+LALVPDLVNLFA VA SPVET EVKAQ+GRAFSHLIS
Sbjct: 941  DREESIAVFTCVCNLVVASNPQILALVPDLVNLFAQVAASPVETSEVKAQVGRAFSHLIS 1000

Query: 184  LYGNQMQPLLGNLSPTHANALAAIAPNS 101
            LYG+QMQPLL NLSP HANALAA AP S
Sbjct: 1001 LYGHQMQPLLSNLSPVHANALAAFAPKS 1028


>ref|XP_002312242.1| predicted protein [Populus trichocarpa] gi|222852062|gb|EEE89609.1|
            predicted protein [Populus trichocarpa]
          Length = 1048

 Score =  224 bits (572), Expect = 5e-57
 Identities = 115/148 (77%), Positives = 122/148 (82%)
 Frame = -2

Query: 544  LKYYGDILRSLYPLFGESEPDDAVRDNAAGAVARMIMVHPDSVPLNQXXXXXXXXXXXKE 365
            LKYYGD LR L+PLFGESEPDDAVRDNAAGAVARMIM HP SVPLNQ           KE
Sbjct: 901  LKYYGDTLRGLFPLFGESEPDDAVRDNAAGAVARMIMAHPQSVPLNQVLPVFLKVLPLKE 960

Query: 364  DHEESMAVYSCVCNLVLSSNSQMLALVPDLVNLFAHVAISPVETPEVKAQIGRAFSHLIS 185
            D EESMAVYSCV  LVLSSN Q+LALVP+LVNLFA V +SPVETPEVKAQ+GRAFSHLIS
Sbjct: 961  DREESMAVYSCVYTLVLSSNQQILALVPELVNLFAQVVVSPVETPEVKAQVGRAFSHLIS 1020

Query: 184  LYGNQMQPLLGNLSPTHANALAAIAPNS 101
            LYG+QMQPLL NL P HA+ALAA AP S
Sbjct: 1021 LYGHQMQPLLSNLPPAHASALAAFAPKS 1048


>ref|XP_002315055.1| predicted protein [Populus trichocarpa] gi|222864095|gb|EEF01226.1|
            predicted protein [Populus trichocarpa]
          Length = 1048

 Score =  223 bits (568), Expect = 2e-56
 Identities = 113/148 (76%), Positives = 122/148 (82%)
 Frame = -2

Query: 544  LKYYGDILRSLYPLFGESEPDDAVRDNAAGAVARMIMVHPDSVPLNQXXXXXXXXXXXKE 365
            LKYYGDILR L+PLFGE EPDDAVRDNAAGAVARMIM HP +VPLNQ           KE
Sbjct: 901  LKYYGDILRGLFPLFGEPEPDDAVRDNAAGAVARMIMAHPQAVPLNQVLPVFLKVLPLKE 960

Query: 364  DHEESMAVYSCVCNLVLSSNSQMLALVPDLVNLFAHVAISPVETPEVKAQIGRAFSHLIS 185
            DHEESMAVYSCV  LVLSSN Q+LALVP+LVNLFA V +SPVET EVKAQ+GRAF+HLIS
Sbjct: 961  DHEESMAVYSCVSTLVLSSNQQILALVPELVNLFAQVVVSPVETAEVKAQVGRAFAHLIS 1020

Query: 184  LYGNQMQPLLGNLSPTHANALAAIAPNS 101
            LYG+QMQPLL NLSP HA+AL A AP S
Sbjct: 1021 LYGHQMQPLLSNLSPAHASALGAFAPKS 1048


>ref|XP_003547537.1| PREDICTED: probable importin subunit beta-4-like [Glycine max]
          Length = 1048

 Score =  220 bits (560), Expect = 1e-55
 Identities = 112/149 (75%), Positives = 123/149 (82%)
 Frame = -2

Query: 547  ALKYYGDILRSLYPLFGESEPDDAVRDNAAGAVARMIMVHPDSVPLNQXXXXXXXXXXXK 368
            ALKYY +ILR L+PLFGESEPDDAVRDNAAGAVARMIMVHP+S+PLNQ           K
Sbjct: 900  ALKYYDNILRGLHPLFGESEPDDAVRDNAAGAVARMIMVHPESIPLNQVLPVFLRVLPLK 959

Query: 367  EDHEESMAVYSCVCNLVLSSNSQMLALVPDLVNLFAHVAISPVETPEVKAQIGRAFSHLI 188
            EDHEESMAVYSCV +LV SSN Q+L+LVP+LVNLFA V +SPVETPEVKA +GRAFSHLI
Sbjct: 960  EDHEESMAVYSCVFSLVFSSNPQILSLVPELVNLFAQVVVSPVETPEVKAVVGRAFSHLI 1019

Query: 187  SLYGNQMQPLLGNLSPTHANALAAIAPNS 101
            SLYG QMQPLL NL P HANAL+A A  S
Sbjct: 1020 SLYGQQMQPLLSNLPPAHANALSAFAQRS 1048


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