BLASTX nr result
ID: Panax21_contig00008822
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00008822
(4412 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera] 1021 0.0
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal... 786 0.0
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi... 786 0.0
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi... 785 0.0
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] 784 0.0
>emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera]
Length = 1300
Score = 1021 bits (2641), Expect(2) = 0.0
Identities = 551/1288 (42%), Positives = 782/1288 (60%), Gaps = 31/1288 (2%)
Frame = -3
Query: 4365 IAHVRDVSSPKQVWETLERLFTQKNTMRFQYLENELAGMTQGTLLIPEYFLKVKTLCAEI 4186
+ H+RD +P + W T +LF++KN R Q LE+EL + Q L I +YF KVKTLC EI
Sbjct: 78 LEHIRDAKTPYEAWNTFTKLFSKKNDTRLQLLESELFSVAQRDLTIAQYFHKVKTLCREI 137
Query: 4185 SELDTEEPVSDARLRRYLICGLRKEFMPFISSIQGWATQPSIIDLENLLSNQEALVKQMT 4006
SELD E P+ + ++R +I GLR EF F+++IQGW QPS+++ ENLL+ QEAL KQM
Sbjct: 138 SELDLEAPIGETXMKRIIIHGLRPEFRGFVAAIQGWQNQPSLVEFENLLAGQEALAKQMG 197
Query: 4005 SNDKQSLSLVEDALYTKDQG-----------NKNFSKQGSDDTERS-------NNEGKFR 3880
SL E+ALY G KN K ERS N G +
Sbjct: 198 G---VSLKGEEEALYAHKGGWNSXQHTVRRTKKNEDKAKCSQGERSARVEGDSKNPGTXK 254
Query: 3879 ENSKECFRCGQLGHMKRDCHVKVVCNRCGRPGHIKANCRVKLMVAGANVAHEKDESEQSK 3700
+ +C+ C + GHM +DC K G +++N A + +DE +
Sbjct: 255 KFEGKCYNCXKKGHMAKDCWSK--------KGLVESN---------ATTSKSEDEWDAQA 297
Query: 3699 WEHCLSITADQSTIVTSARTDVNASIDYNNEWIVDSGFSHHAT*NDSLFSDVRPHCGKKT 3520
+ + + + I T++ IDY +WI+DSG S+H T + D+ + G+
Sbjct: 298 F---FAAIGESAFIATTSE-----QIDYEKDWIIDSGCSNHMTGDKEKLQDLSEYKGRHM 349
Query: 3519 IATADNSLYPVEK--GHFEADISNNRGVSLKDVYHVPGLTKNLASVSQIIDDGRYVLFGP 3346
+ TA+NS P+ + N VSL++VYHVPG+ KNL SV+Q+ G VLFGP
Sbjct: 350 VVTANNSKLPIAHIGNTVVSSQYNTNDVSLQNVYHVPGMKKNLLSVAQLTSSGHSVLFGP 409
Query: 3345 KNVQILSNIKHIEADVLFTGRRKESLYLLSASDAYVEKTSQNESATLWHNRLGHVGYQLL 3166
++V++ +++ +E V+ GRR ES+Y++SA AYV+KT +NE+A LWH RL H+ Y L
Sbjct: 410 QDVKVYHDLEVMEEPVI-KGRRLESVYVMSAETAYVDKTRKNETADLWHMRLSHISYSKL 468
Query: 3165 QKISTKKLLDGVPLFNEIHHDVVCPGCQYGKSHCLPFPNSKNRASAALQLVHSDLMGPTK 2986
+ K +L G+P E+ +C CQYGK+H LP+ SK +A L+L+HSD+ GP K
Sbjct: 469 TMMMKKSMLKGLPQL-EVRKXTICAXCQYGKAHQLPYEESKWKAKGPLELIHSDVFGPVK 527
Query: 2985 TPSYSSFRYVMVLVDEFSRFTWVYFLENKSEAFSNFVKFKEQVEKEFGLQIKCMRTDNGG 2806
S S +Y++ +D+FSR + LQ+ +
Sbjct: 528 QASLSGMKYMVTFIDDFSRRVY--------------------------LQMSFFTSSENX 561
Query: 2805 EYMSDQFLNYCREHDIQRQMTFRETPQQNGVVERKLAYLTSMCLSWLHTKNLPRKLWAAA 2626
EY T TPQQNGV ERK +L +C S LH KN+P WA
Sbjct: 562 EYAIS--------------FTCANTPQQNGVXERKNRHLAEICRSMLHAKNVPGXFWAEX 607
Query: 2625 VQSTCHVINRLPSWPGTEPSPFEALYHHTPSVSYFRVFGLVCYAHVSKTNQTKLDPRARR 2446
+++ VINRLP SPFE L++ P+VSYFRVFG VCY V ++K+D +A R
Sbjct: 608 MKTAAFVINRLPQQRLNFSSPFEKLWNIKPTVSYFRVFGCVCYVFVPNHLRSKMDKKAVR 667
Query: 2445 CIFVGYDTHRKGWKCMDPETKKVDVSRDVVFDEVSSLQIDTDRDTIDLSPFPDGASRERG 2266
C+ VGYD+ RK W+C DP T K SR+VVFDE SS D F D R
Sbjct: 668 CVLVGYDSQRKXWRCCDPTTGKCYTSRNVVFDESSSWWSSEKEILXDSBVFKDELQSARI 727
Query: 2265 SNITPTKENIQEEET----------TGTVLQRTSRQRRQPDYLADYDCSVVSCFFT*GSC 2116
EN + + TG Q + + ++P+ + +
Sbjct: 728 QLSLGEAENAXDGDIGDDXTQSPWQTGVHGQPSEERTKKPNP------KYANVAIVEDAN 781
Query: 2115 EDEPMSYNEAKGISEWEEAI*KEISALNKNCAWELVPKPKSVAPVTCKWVYKLKKRADGT 1936
EP ++ EA S+W +A+ +EI+AL +N WELVPKP+ V P +CKWVYK+K+R DG+
Sbjct: 782 AKEPXTFAEAFQNSDWSKAMXEEIAALKRNQTWELVPKPRDVEPXSCKWVYKIKRRTDGS 841
Query: 1935 IDRYKARLVARRFSQQYGLDYEETFSPVAKMVTIRTIISLAAYKGWKLWQLDVKNAFLYG 1756
I+R+KA LVAR FSQQYGLDY+ETFSPV K+ T+R +++LAA K W LWQ+DVKNAFL+G
Sbjct: 842 IERHKAXLVARGFSQQYGLDYDETFSPVXKLTTVRVLLALAANKDWDLWQMDVKNAFLHG 901
Query: 1755 EVDHDIFMEQPHGFISKEFPNHVCRLKKALYGLKQAPRAWYGKIAQYLDFCGFKSSNADS 1576
E+D +I+M QP GF S+ P +VC+L+KALYGLKQAPRAWYGKIA++L G+ + ADS
Sbjct: 902 ELDREIYMNQPMGFQSQGHPEYVCKLRKALYGLKQAPRAWYGKIAEFLTQSGYSVTPADS 961
Query: 1575 SLFVKKTSLVCTMLLLYVDDMIITGDDDAEITSLQDALSLRFEIKSLGEVSYFLGPEVNK 1396
SLFVK ++L+YVDD+IITGDD EI ++ LS+RFE+K LG++ +FLG EV++
Sbjct: 962 SLFVKANGGKLAIVLVYVDDLIITGDDVEEIFRTKENLSVRFEMKELGQLKHFLGLEVDR 1021
Query: 1395 -SDGYFVSQTRYATRLLDHFQMRESKIMATPMDPCLKLVKNERRFLEDATLFRQIVGSLF 1219
++G F+ Q +YA LL F M E K ++TPM+P K+ ++E + L+DAT++RQ+VGSL
Sbjct: 1022 TNEGIFLCQQKYAKDLLKKFGMLECKPISTPMEPNAKMCEHEGKDLKDATMYRQLVGSLL 1081
Query: 1218 YLTITRPEISFSVGVVSQFMDKPCESHLIEAKRILRYIKGTLNFGLFYQQHTPFLLTGFV 1039
YLT+T P+IS++VGV+S++M P + HL +RILR++KGT+++GL Y++ L G+
Sbjct: 1082 YLTLTXPDISYAVGVMSRYMQNPKKPHLEAVRRILRHVKGTIDYGLLYKKXEDCKLVGYC 1141
Query: 1038 DADWAGDLNDRRSTTGYCFNMGSAAISWCSKKQSTVAFCSCEAEYVAASMATQECIWLKR 859
DAD+AGD + R STTGY F +GS AISWCSK+Q TV+ + EAEY AA+MATQE +WL R
Sbjct: 1142 DADYAGDHDTRXSTTGYVFMLGSGAISWCSKRQPTVSLSTTEAEYRAAAMATQESMWLIR 1201
Query: 858 LIQEMLSALDHPIPIHCDSESAIMIAGNPVFHARTKHIETCYHFVREMVLTQDIQLQKIR 679
L+ ++ +D+ +P++CD++SA+ +A NPVFHARTKH+E YHF+RE VL ++++L +I+
Sbjct: 1202 LMNDLHQLVDYAVPLYCDNQSAVRLAENPVFHARTKHVEVHYHFIREKVLKEEVELNQIK 1261
Query: 678 TDDQIADIFTKALGKAKFEVFRGALGIV 595
++DQ+AD+FTK L +KFE F LG+V
Sbjct: 1262 SEDQVADLFTKGLSGSKFESFCHQLGMV 1289
Score = 31.2 bits (69), Expect(2) = 0.0
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -1
Query: 4412 RKWKIKCDKAMFALQTS 4362
RKWKIK KAMFAL+T+
Sbjct: 56 RKWKIKAGKAMFALKTT 72
>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
Length = 1352
Score = 786 bits (2031), Expect = 0.0
Identities = 469/1308 (35%), Positives = 715/1308 (54%), Gaps = 44/1308 (3%)
Frame = -3
Query: 4356 VRDVSSPKQVWETLERLFT---QKNTMRFQYLENELAG--MTQGTLLIPEYFLKVKTLCA 4192
V + +S K+ WE L + Q +R Q L E M +G L + +YF +V T+
Sbjct: 85 VVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQMKEGEL-VSDYFSRVLTVTN 143
Query: 4191 EISELDTEEPVSDARLRRYLICGLRKEFMPFISSIQGWATQPSIIDLENLLSNQEALVKQ 4012
+ E + D R+ ++ L +F ++ I+ + +E LL + +A ++
Sbjct: 144 NLKR--NGEKLDDVRIMEKVLRSLDLKFEHIVTVIEE-TKDLEAMTIEQLLGSLQAYEEK 200
Query: 4011 MTSNDKQSLSLVEDAL---YTKDQGNKNFSKQGSDDTERSN------------NEGKFRE 3877
K+ +VE L TK++ +++ ++G +E +
Sbjct: 201 K----KKKEDIVEQVLNMQITKEENGQSYQRRGGGQVRGRGRGGYGNGRGWRPHEDNTNQ 256
Query: 3876 NSKECFRCGQLGHMK-RDCHVKVVCNRCGRPGHIKANCRV---KLMVAGANVAHEKDESE 3709
+ R GH K R V C CG+ GH + C+ K AN EK + E
Sbjct: 257 RGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAPSNKKFEEKANYVEEKIQEE 316
Query: 3708 QSKWEHCLSITADQSTIVTSARTDVNASIDYNNEWIVDSGFSHHAT*NDSLFSDVRPHCG 3529
++ S + D N++W +DSG S+H S+F+++
Sbjct: 317 DM-------------LLMASYKKDEQKE---NHKWYLDSGASNHMCGRKSMFAELDESV- 359
Query: 3528 KKTIATADNSLYPVE-KGHFEADISNNRGVSLKDVYHVPGLTKNLASVSQIIDDGRYVLF 3352
+ +A D S V+ KG+ + N + +VY++P + N+ S+ Q+++ G +
Sbjct: 360 RGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRL 419
Query: 3351 GPKNVQILSNIKHIEADVLFTGRRKESLYLLSASDAYVE--KTSQNESATLWHNRLGHVG 3178
N+ I ++ V + K +++L+ + + K E + LWH R GH+
Sbjct: 420 KDNNLSIRDQESNLITKVPMS---KNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLN 476
Query: 3177 YQLLQKISTKKLLDGVPLFNEIHHDVVCPGCQYGKSHCLPFPN-SKNRASAALQLVHSDL 3001
+ L+ +S K+++ G+P N H + VC GC GK + FP S +RA L+L+H+D+
Sbjct: 477 FGGLELLSRKEMVRGLPCIN--HPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDV 534
Query: 3000 MGPTKTPSYSSFRYVMVLVDEFSRFTWVYFLENKSEAFSNFVKFKEQVEKEFGLQIKCMR 2821
GP K S Y ++ +D+FSR TWVYFL+ KSE F F KFK VEKE GL IK MR
Sbjct: 535 CGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMR 594
Query: 2820 TDNGGEYMSDQFLNYCREHDIQRQMTFRETPQQNGVVERKLAYLTSMCLSWLHTKNLPRK 2641
+D GGE+ S +FL YC ++ I+RQ+T +PQQNGVVERK + M S L +K LP++
Sbjct: 595 SDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLPKE 654
Query: 2640 LWAAAVQSTCHVINRLPSWPGTEPSPFEALYHHTPSVSYFRVFGLVCYAHVSKTNQTKLD 2461
LWA AV +++NR P+ + +P EA P VS+ RVFG + +AHV ++KLD
Sbjct: 655 LWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLD 714
Query: 2460 PRARRCIFVGYDTHRKGWKCMDPETKKVDVSRDVVFDEVSSLQIDTDRDTIDLSPFPDGA 2281
++ + IF+GYD + KG+K +P+TKK +SR++VFDE +++ + + P +
Sbjct: 715 DKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEED 774
Query: 2280 SRERGSNITPTKENIQEEETTGTVLQRTSRQ------RRQPDYLADYDCSVVS------- 2140
E PT+E EE T TS Q R P + + + V+
Sbjct: 775 EPE------PTREEPPSEEPTTPPTSPTSSQIEESSSERTPRFRSIQELYEVTENQENLT 828
Query: 2139 --CFFT*GSCEDEPMSYNEAKGISEWEEAI*KEISALNKNCAWELVPKPKSVAPVTCKWV 1966
C F E EPM + +A W A+ +EI ++ KN WEL P + KWV
Sbjct: 829 LFCLFA----ECEPMDFQKAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWV 884
Query: 1965 YKLKKRADGTIDRYKARLVARRFSQQYGLDYEETFSPVAKMVTIRTIISLAAYKGWKLWQ 1786
YK KK + G ++RYKARLVA+ +SQ+ G+DY+E F+PVA++ T+R IISLAA WK+ Q
Sbjct: 885 YKAKKNSKGEVERYKARLVAKGYSQRVGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQ 944
Query: 1785 LDVKNAFLYGEVDHDIFMEQPHGFISKEFPNHVCRLKKALYGLKQAPRAWYGKIAQYLDF 1606
+DVK+AFL G+++ ++++EQP G+I K + V RLKK LYGLKQAPRAW +I +Y
Sbjct: 945 MDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKE 1004
Query: 1605 CGFKSSNADSSLFVKKTSLVCTMLLLYVDDMIITGDDDAEITSLQDALSLRFEIKSLGEV 1426
F + +L++K + LYVDD+I TG++ + + ++ FE+ +G +
Sbjct: 1005 KDFIKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDIGLM 1064
Query: 1425 SYFLGPEVNKSD-GYFVSQTRYATRLLDHFQMRESKIMATPMDPCLKLVKNERRFLEDAT 1249
SY+LG EV + D G F++Q YA +L F+M +S + TPM+ +KL K E D T
Sbjct: 1065 SYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPT 1124
Query: 1248 LFRQIVGSLFYLTITRPEISFSVGVVSQFMDKPCESHLIEAKRILRYIKGTLNFGLFYQQ 1069
F+ +VGSL YLT TRP+I ++VGVVS++M+ P +H AKRILRYIKGT+NFGL Y
Sbjct: 1125 TFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYST 1184
Query: 1068 HTPFLLTGFVDADWAGDLNDRRSTTGYCFNMGSAAISWCSKKQSTVAFCSCEAEYVAASM 889
+ + L G+ D+DW GD++DR+ST+G+ F +G A +W SKKQ V +CEAEYVAA+
Sbjct: 1185 TSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATS 1244
Query: 888 ATQECIWLKRLIQEMLSALDHPIPIHCDSESAIMIAGNPVFHARTKHIETCYHFVREMVL 709
IWL+ L++E+ + P I D++SAI +A NPVFH R+KHI+T YH++RE V
Sbjct: 1245 CVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVS 1304
Query: 708 TQDIQLQKIRTDDQIADIFTKALGKAKFEVFRGALGIVDSTFALRGSV 565
+D+QL+ ++T DQ+AD FTK L + F R LG+ S +LRG V
Sbjct: 1305 KKDVQLEYVKTHDQVADFFTKPLKRENFIKMRSLLGVAKS--SLRGGV 1350
>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
polyprotein, putative [Arabidopsis thaliana]
Length = 1320
Score = 786 bits (2030), Expect = 0.0
Identities = 465/1293 (35%), Positives = 709/1293 (54%), Gaps = 29/1293 (2%)
Frame = -3
Query: 4356 VRDVSSPKQVWETLERLFT---QKNTMRFQYLENELAG--MTQGTLLIPEYFLKVKTLCA 4192
V + +S K+ WE L + Q +R Q L E M +G L + +YF +V T+
Sbjct: 85 VVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQMKEGEL-VSDYFSRVLTVTN 143
Query: 4191 EISELDTEEPVSDARLRRYLICGLRKEFMPFISSIQGWATQPSIIDLENLLSNQEALVKQ 4012
+ E + D R+ ++ L +F ++ I+ + +E LL + +A ++
Sbjct: 144 NLKR--NGEKLDDVRIMEKVLRSLDLKFEHIVTVIEE-TKDLEAMTIEQLLGSLQAYEEK 200
Query: 4011 MTSNDKQSLSLVEDAL---YTKDQGNKNFSKQGSDDTERSN------------NEGKFRE 3877
K+ +VE L TK++ +++ ++G +E +
Sbjct: 201 K----KKKEDIVEQVLNMQITKEENGQSYQRRGGGQVRGRGRGGYGNGRGWRPHEDNTNQ 256
Query: 3876 NSKECFRCGQLGHMK-RDCHVKVVCNRCGRPGHIKANCRV---KLMVAGANVAHEKDESE 3709
+ R GH K R V C CG+ GH + C+ K AN EK + E
Sbjct: 257 RGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAPSNKKFEEKANYVEEKIQEE 316
Query: 3708 QSKWEHCLSITADQSTIVTSARTDVNASIDYNNEWIVDSGFSHHAT*NDSLFSDVRPHCG 3529
++ S + D + N++W +DSG S+H S+F+++
Sbjct: 317 DM-------------LLMASYKKDEQ---EENHKWYLDSGASNHMCGRKSMFAELDESV- 359
Query: 3528 KKTIATADNSLYPVE-KGHFEADISNNRGVSLKDVYHVPGLTKNLASVSQIIDDGRYVLF 3352
+ +A D S V+ KG+ + N + +VY++P + N+ S+ Q+++ G +
Sbjct: 360 RGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRL 419
Query: 3351 GPKNVQILSNIKHIEADVLFTGRRKESLYLLSASDAYVE--KTSQNESATLWHNRLGHVG 3178
N+ I ++ V + K +++L+ + + K E + LWH R GH+
Sbjct: 420 KDNNLSIRDQESNLITKVPMS---KNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLN 476
Query: 3177 YQLLQKISTKKLLDGVPLFNEIHHDVVCPGCQYGKSHCLPFPN-SKNRASAALQLVHSDL 3001
+ L+ +S K+++ G+P N H + VC GC GK + FP S +RA L+L+H+D+
Sbjct: 477 FGGLELLSRKEMVRGLPCIN--HPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDV 534
Query: 3000 MGPTKTPSYSSFRYVMVLVDEFSRFTWVYFLENKSEAFSNFVKFKEQVEKEFGLQIKCMR 2821
GP K S Y ++ +D+FSR TWVYFL+ KSE F F KFK VEKE GL IK MR
Sbjct: 535 CGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMR 594
Query: 2820 TDNGGEYMSDQFLNYCREHDIQRQMTFRETPQQNGVVERKLAYLTSMCLSWLHTKNLPRK 2641
+D GGE+ S +FL YC ++ I+RQ+T +PQQNGV ERK + M S L +K LP++
Sbjct: 595 SDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKE 654
Query: 2640 LWAAAVQSTCHVINRLPSWPGTEPSPFEALYHHTPSVSYFRVFGLVCYAHVSKTNQTKLD 2461
LWA AV +++NR P+ + +P EA P VS+ RVFG + +AHV ++KLD
Sbjct: 655 LWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLD 714
Query: 2460 PRARRCIFVGYDTHRKGWKCMDPETKKVDVSRDVVFDEVSSLQIDTDRDTIDLSPFPDGA 2281
++ + IF+GYD + KG+K +P+TKK +SR++VFDE +++ + + P +
Sbjct: 715 DKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEED 774
Query: 2280 SRERGSNITPTKENIQEEETTGTVLQRTSRQRRQPDYLADYDCSVVSCFFT*GSCEDEPM 2101
E PT+E EE T TS Q + + EPM
Sbjct: 775 KPE------PTREEPPSEEPTTPPTSPTSSQIEE---------------------KCEPM 807
Query: 2100 SYNEAKGISEWEEAI*KEISALNKNCAWELVPKPKSVAPVTCKWVYKLKKRADGTIDRYK 1921
+ EA W A+ +EI ++ KN WEL P + KWVYK KK + G ++RYK
Sbjct: 808 DFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYK 867
Query: 1920 ARLVARRFSQQYGLDYEETFSPVAKMVTIRTIISLAAYKGWKLWQLDVKNAFLYGEVDHD 1741
ARLVA+ +SQ+ G+DY+E F+PVA++ T+R IISLAA WK+ Q+DVK+AFL G+++ +
Sbjct: 868 ARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEE 927
Query: 1740 IFMEQPHGFISKEFPNHVCRLKKALYGLKQAPRAWYGKIAQYLDFCGFKSSNADSSLFVK 1561
+++EQP G+I K + V RLKKALYGLKQAPRAW +I +Y F + +L++K
Sbjct: 928 VYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIK 987
Query: 1560 KTSLVCTMLLLYVDDMIITGDDDAEITSLQDALSLRFEIKSLGEVSYFLGPEVNKSD-GY 1384
+ LYVDD+I TG++ + + ++ FE+ +G +SY+LG EV + D G
Sbjct: 988 IQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGI 1047
Query: 1383 FVSQTRYATRLLDHFQMRESKIMATPMDPCLKLVKNERRFLEDATLFRQIVGSLFYLTIT 1204
F++Q YA +L F+M +S + TPM+ +KL K E D T F+ +VGSL YLT T
Sbjct: 1048 FITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCT 1107
Query: 1203 RPEISFSVGVVSQFMDKPCESHLIEAKRILRYIKGTLNFGLFYQQHTPFLLTGFVDADWA 1024
RP+I ++VGVVS++M+ P +H AKRILRYIKGT+NFGL Y + + L G+ D+DW
Sbjct: 1108 RPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWG 1167
Query: 1023 GDLNDRRSTTGYCFNMGSAAISWCSKKQSTVAFCSCEAEYVAASMATQECIWLKRLIQEM 844
GD++DR+ST+G+ F +G A +W SKKQ V +CEAEYVAA+ IWL+ L++E+
Sbjct: 1168 GDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKEL 1227
Query: 843 LSALDHPIPIHCDSESAIMIAGNPVFHARTKHIETCYHFVREMVLTQDIQLQKIRTDDQI 664
+ P I D++SAI +A NPVFH R+KHI+T YH++RE V +D+QL+ ++T DQ+
Sbjct: 1228 SLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQV 1287
Query: 663 ADIFTKALGKAKFEVFRGALGIVDSTFALRGSV 565
ADIFTK L + F R LG+ S +LRG V
Sbjct: 1288 ADIFTKPLKREDFIKMRSLLGVAKS--SLRGGV 1318
>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1352
Score = 785 bits (2026), Expect = 0.0
Identities = 468/1308 (35%), Positives = 716/1308 (54%), Gaps = 44/1308 (3%)
Frame = -3
Query: 4356 VRDVSSPKQVWETLERLFT---QKNTMRFQYLENELAG--MTQGTLLIPEYFLKVKTLCA 4192
V + +S K+ WE L + Q +R Q L E M +G L + +YF +V T+
Sbjct: 85 VVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQMKEGEL-VSDYFSRVLTVTN 143
Query: 4191 EISELDTEEPVSDARLRRYLICGLRKEFMPFISSIQGWATQPSIIDLENLLSNQEALVKQ 4012
+ E + D R+ ++ L +F ++ I+ + +E LL + +A ++
Sbjct: 144 NLKR--NGEKLDDVRIMEKVLRSLDLKFEHIVTVIEE-TKDLEAMTIEQLLGSLQAYEEK 200
Query: 4011 MTSNDKQSLSLVEDAL---YTKDQGNKNFSKQGSDDTERSN------------NEGKFRE 3877
K+ ++E L TK++ +++ ++G +E +
Sbjct: 201 K----KKKEDIIEQVLNMQITKEENGQSYQRRGGGQVRGRGRGGYGNGRGWRPHEDNTNQ 256
Query: 3876 NSKECFRCGQLGHMK-RDCHVKVVCNRCGRPGHIKANCRV---KLMVAGANVAHEKDESE 3709
+ R GH K R V C CG+ GH + C+ K AN EK + E
Sbjct: 257 RGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAPSNKKFEEKANYVEEKIQEE 316
Query: 3708 QSKWEHCLSITADQSTIVTSARTDVNASIDYNNEWIVDSGFSHHAT*NDSLFSDVRPHCG 3529
++ S + D + N++W +DSG S+H S+F+++
Sbjct: 317 DM-------------LLMASYKKDEQ---EENHKWYLDSGASNHMCGRKSMFAELDESV- 359
Query: 3528 KKTIATADNSLYPVE-KGHFEADISNNRGVSLKDVYHVPGLTKNLASVSQIIDDGRYVLF 3352
+ +A D S V+ KG+ + N + +VY++P + N+ S+ Q+++ G +
Sbjct: 360 RGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRL 419
Query: 3351 GPKNVQILSNIKHIEADVLFTGRRKESLYLLSASDAYVE--KTSQNESATLWHNRLGHVG 3178
N+ I ++ V + K +++L+ + + K E + LWH R GH+
Sbjct: 420 KDNNLSIRDQESNLITKVPMS---KNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLN 476
Query: 3177 YQLLQKISTKKLLDGVPLFNEIHHDVVCPGCQYGKSHCLPFPN-SKNRASAALQLVHSDL 3001
+ L+ +S K+++ G+P N H + VC GC GK + FP S +RA +L+L+H+D+
Sbjct: 477 FGGLELLSRKEMVRGLPCIN--HPNQVCEGCLLGKQFKMSFPKESSSRAQKSLELIHTDV 534
Query: 3000 MGPTKTPSYSSFRYVMVLVDEFSRFTWVYFLENKSEAFSNFVKFKEQVEKEFGLQIKCMR 2821
GP K S Y ++ +D+FSR TWVYFL+ KSE F F KFK VEKE GL IK MR
Sbjct: 535 CGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMR 594
Query: 2820 TDNGGEYMSDQFLNYCREHDIQRQMTFRETPQQNGVVERKLAYLTSMCLSWLHTKNLPRK 2641
+D GGE+ S +FL YC ++ I+RQ+T +PQQNGV ERK + M S L +K LP++
Sbjct: 595 SDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKE 654
Query: 2640 LWAAAVQSTCHVINRLPSWPGTEPSPFEALYHHTPSVSYFRVFGLVCYAHVSKTNQTKLD 2461
LWA AV +++NR P+ + +P EA VS+ RVFG + +AHV ++KLD
Sbjct: 655 LWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKSGVSHLRVFGSIAHAHVPDEKRSKLD 714
Query: 2460 PRARRCIFVGYDTHRKGWKCMDPETKKVDVSRDVVFDEVSSLQIDTDRDTIDLSPFPDGA 2281
++ + IF+GYD + KG+K +P+TKK +SR++VFDE +++ + + P +
Sbjct: 715 DKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEED 774
Query: 2280 SRERGSNITPTKENIQEEETTGTVLQRTSRQ------RRQPDYLADYDCSVVS------- 2140
E PT+E EE T TS Q R P + + + V+
Sbjct: 775 EPE------PTREEPPSEEPTTPPTSPTSSQIEESSSERTPRFRSIQELYEVTENQENLT 828
Query: 2139 --CFFT*GSCEDEPMSYNEAKGISEWEEAI*KEISALNKNCAWELVPKPKSVAPVTCKWV 1966
C F E EPM + EA W A+ +EI ++ KN WEL P + KWV
Sbjct: 829 LFCLFA----ECEPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKTIGVKWV 884
Query: 1965 YKLKKRADGTIDRYKARLVARRFSQQYGLDYEETFSPVAKMVTIRTIISLAAYKGWKLWQ 1786
YK KK + G ++RYKARLVA+ + Q+ G+DY+E F+PVA++ T+R IISLAA WK+ Q
Sbjct: 885 YKAKKNSKGEVERYKARLVAKGYIQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQ 944
Query: 1785 LDVKNAFLYGEVDHDIFMEQPHGFISKEFPNHVCRLKKALYGLKQAPRAWYGKIAQYLDF 1606
+DVK+AFL G+++ ++++EQP G+I K + V RLKKALYGLKQAPRAW +I +Y
Sbjct: 945 MDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKE 1004
Query: 1605 CGFKSSNADSSLFVKKTSLVCTMLLLYVDDMIITGDDDAEITSLQDALSLRFEIKSLGEV 1426
F + +L++K + LYVDD+I TG++ + + ++ FE+ +G +
Sbjct: 1005 KDFIKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLM 1064
Query: 1425 SYFLGPEVNKSD-GYFVSQTRYATRLLDHFQMRESKIMATPMDPCLKLVKNERRFLEDAT 1249
SY+LG EV + D G F++Q YA +L F+M +S + TPM+ +KL K E D T
Sbjct: 1065 SYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPT 1124
Query: 1248 LFRQIVGSLFYLTITRPEISFSVGVVSQFMDKPCESHLIEAKRILRYIKGTLNFGLFYQQ 1069
F+ +VGSL YLT TRP+I ++VGVVS++M+ P +H AKRILRYIKGT+NFGL Y
Sbjct: 1125 TFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYST 1184
Query: 1068 HTPFLLTGFVDADWAGDLNDRRSTTGYCFNMGSAAISWCSKKQSTVAFCSCEAEYVAASM 889
+ + L G+ D+DW GD++DR+ST+G+ F +G A +W SKKQ V +CEAEYVAA+
Sbjct: 1185 TSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVVLSTCEAEYVAATS 1244
Query: 888 ATQECIWLKRLIQEMLSALDHPIPIHCDSESAIMIAGNPVFHARTKHIETCYHFVREMVL 709
IWL+ L++E+ + P I D++SAI +A NPVFH R+KHI+T YH++RE V
Sbjct: 1245 CVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVS 1304
Query: 708 TQDIQLQKIRTDDQIADIFTKALGKAKFEVFRGALGIVDSTFALRGSV 565
+D+QL+ ++T DQ+ADIFTK L + F R LG+ S +LRG V
Sbjct: 1305 KKDVQLEYVKTHDQVADIFTKPLKREDFIKMRSLLGVAKS--SLRGGV 1350
>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
Length = 1352
Score = 784 bits (2024), Expect = 0.0
Identities = 465/1305 (35%), Positives = 713/1305 (54%), Gaps = 41/1305 (3%)
Frame = -3
Query: 4356 VRDVSSPKQVWETLERLFT---QKNTMRFQYLENELAG--MTQGTLLIPEYFLKVKTLCA 4192
V + +S K+ WE L + Q +R Q L E M +G L + +YF +V T+
Sbjct: 85 VVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQMKEGEL-VSDYFSRVLTVTN 143
Query: 4191 EISELDTEEPVSDARLRRYLICGLRKEFMPFISSIQGWATQPSIIDLENLLSNQEALVKQ 4012
+ E + D R+ ++ L +F ++ I+ + +E LL + +A ++
Sbjct: 144 NLKR--NGEKLDDVRIMEKVLRSLDLKFEHIVTVIEE-TKDLEAMTIEQLLGSLQAYEEK 200
Query: 4011 MTSNDKQSLSLVEDAL---YTKDQGNKNFSKQGSDDTERSN------------NEGKFRE 3877
K+ + E L TK++ +++ ++G +E +
Sbjct: 201 K----KKKEDIAEQVLNMQITKEENGQSYQRRGGGQVRGRGRGGYGNGRGWRPHEDNTNQ 256
Query: 3876 NSKECFRCGQLGHMK-RDCHVKVVCNRCGRPGHIKANCRVKLMVAGANVAHEKDESEQSK 3700
+ R GH K R V C CG+ GH + C+ AH +E Q
Sbjct: 257 RGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAPSNKKFEEKAHYVEEKIQE- 315
Query: 3699 WEHCLSITADQSTIVTSARTDVNASIDYNNEWIVDSGFSHHAT*NDSLFSDVRPHCGKKT 3520
+ ++ S + D N++W +DSG S+H S+F+++ +
Sbjct: 316 ---------EDMLLMASYKKDEQKE---NHKWYLDSGASNHMCGRKSMFAELDESV-RGN 362
Query: 3519 IATADNSLYPVE-KGHFEADISNNRGVSLKDVYHVPGLTKNLASVSQIIDDGRYVLFGPK 3343
+A D S V+ KG+ + N + +VY++P + N+ S+ Q+++ G +
Sbjct: 363 VALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDN 422
Query: 3342 NVQILSNIKHIEADVLFTGRRKESLYLLSASDAYVE--KTSQNESATLWHNRLGHVGYQL 3169
N+ I ++ V + K +++L+ + + K E + LWH R GH+ +
Sbjct: 423 NLSIRDQESNLITKVPMS---KNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGG 479
Query: 3168 LQKISTKKLLDGVPLFNEIHHDVVCPGCQYGKSHCLPFPN-SKNRASAALQLVHSDLMGP 2992
L+ +S K+++ G+P N H + VC GC GK + FP S +RA L+L+H+D+ GP
Sbjct: 480 LELLSRKEMVRGLPCIN--HPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGP 537
Query: 2991 TKTPSYSSFRYVMVLVDEFSRFTWVYFLENKSEAFSNFVKFKEQVEKEFGLQIKCMRTDN 2812
K S Y ++ +D+FSR TWVYFL+ KSE F F KFK VEKE GL IK MR+D
Sbjct: 538 IKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDR 597
Query: 2811 GGEYMSDQFLNYCREHDIQRQMTFRETPQQNGVVERKLAYLTSMCLSWLHTKNLPRKLWA 2632
GGE+ S +FL YC ++ I+RQ+T +PQQNGVVERK + M S L +K LP++LWA
Sbjct: 598 GGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLPKELWA 657
Query: 2631 AAVQSTCHVINRLPSWPGTEPSPFEALYHHTPSVSYFRVFGLVCYAHVSKTNQTKLDPRA 2452
AV +++NR P+ + +P EA P VS+ RVFG + +AHV ++KLD ++
Sbjct: 658 EAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKS 717
Query: 2451 RRCIFVGYDTHRKGWKCMDPETKKVDVSRDVVFDEVSSLQIDTDRDTIDLSPFPDGASRE 2272
+ IF+GYD + KG+K +P+TKK +SR++VFDE +++ + + P + E
Sbjct: 718 EKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDEPE 777
Query: 2271 RGSNITPTKENIQEEETTGTVLQRTSRQ------RRQPDYLADYDCSVVS---------C 2137
PT+E EE T TS Q R P + + + V+ C
Sbjct: 778 ------PTREEPPSEEPTTPPTSPTSSQIEESSSERTPRFRSIQELYEVTENQENLTLFC 831
Query: 2136 FFT*GSCEDEPMSYNEAKGISEWEEAI*KEISALNKNCAWELVPKPKSVAPVTCKWVYKL 1957
F E EPM + +A W A+ +EI ++ KN WEL P + KWVYK
Sbjct: 832 LFA----ECEPMDFQKAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKA 887
Query: 1956 KKRADGTIDRYKARLVARRFSQQYGLDYEETFSPVAKMVTIRTIISLAAYKGWKLWQLDV 1777
KK + G ++RYKARLVA+ +SQ+ G+DY+E F+PVA++ T+R IISLAA WK+ Q+DV
Sbjct: 888 KKNSKGEVERYKARLVAKGYSQRVGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDV 947
Query: 1776 KNAFLYGEVDHDIFMEQPHGFISKEFPNHVCRLKKALYGLKQAPRAWYGKIAQYLDFCGF 1597
K+AFL G+++ ++++EQP G+I K + V RLKK LYGLKQAPRAW +I +Y F
Sbjct: 948 KSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDF 1007
Query: 1596 KSSNADSSLFVKKTSLVCTMLLLYVDDMIITGDDDAEITSLQDALSLRFEIKSLGEVSYF 1417
+ +L++K + LYVDD+I TG++ + + ++ FE+ +G +SY+
Sbjct: 1008 IKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDIGLMSYY 1067
Query: 1416 LGPEVNKSD-GYFVSQTRYATRLLDHFQMRESKIMATPMDPCLKLVKNERRFLEDATLFR 1240
LG EV + D G F++Q YA +L F++ +S + TPM+ +KL K E D T F+
Sbjct: 1068 LGIEVKQEDNGIFITQEGYAKEVLKKFKIDDSNPVCTPMECGIKLSKKEEGEGVDPTTFK 1127
Query: 1239 QIVGSLFYLTITRPEISFSVGVVSQFMDKPCESHLIEAKRILRYIKGTLNFGLFYQQHTP 1060
+VGSL YLT TRP+I ++VGVVS++M+ P +H AKRILRYIKGT+NFGL Y +
Sbjct: 1128 SLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSD 1187
Query: 1059 FLLTGFVDADWAGDLNDRRSTTGYCFNMGSAAISWCSKKQSTVAFCSCEAEYVAASMATQ 880
+ L G+ D+DW GD++DR+ST+G+ F +G A +W SKKQ V +CEAEYVAA+
Sbjct: 1188 YKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVC 1247
Query: 879 ECIWLKRLIQEMLSALDHPIPIHCDSESAIMIAGNPVFHARTKHIETCYHFVREMVLTQD 700
IWL+ L++E+ + P I D++SAI +A NPVFH R+KHI+T YH++RE V +D
Sbjct: 1248 HAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKD 1307
Query: 699 IQLQKIRTDDQIADIFTKALGKAKFEVFRGALGIVDSTFALRGSV 565
+QL+ ++T DQ+AD FTK L + F R LG+ S +LRG V
Sbjct: 1308 VQLEYVKTHDQVADFFTKPLKRENFIKMRSLLGVAKS--SLRGGV 1350