BLASTX nr result

ID: Panax21_contig00008817 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008817
         (848 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539627.1| PREDICTED: pumilio homolog 2-like [Glycine max]   123   1e-28
ref|XP_003537980.1| PREDICTED: pumilio homolog 2-like [Glycine max]   122   3e-28
ref|XP_003539618.1| PREDICTED: pumilio homolog 2-like [Glycine max]   122   3e-28
ref|XP_003606712.1| Pumilio-like protein [Medicago truncatula] g...   122   3e-28
ref|XP_002314164.1| predicted protein [Populus trichocarpa] gi|2...   122   3e-28

>ref|XP_003539627.1| PREDICTED: pumilio homolog 2-like [Glycine max]
          Length = 1053

 Score =  123 bits (309), Expect(2) = 1e-28
 Identities = 60/69 (86%), Positives = 64/69 (92%)
 Frame = +3

Query: 267 SADQYGSRFIQQKLETATTDEKNMVYQEIFPQALTLMTNVFGNYVVQKFFEHGMAS*RRE 446
           SADQYGSRFIQQKLETATT+EKNMVYQEI P AL LMT+VFGNYVVQKFFEHG+AS RRE
Sbjct: 726 SADQYGSRFIQQKLETATTEEKNMVYQEIMPHALALMTDVFGNYVVQKFFEHGLASQRRE 785

Query: 447 LTNKLVGHV 473
           L NKL+GHV
Sbjct: 786 LANKLLGHV 794



 Score = 29.6 bits (65), Expect(2) = 1e-28
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = +1

Query: 568 SLQMYGCRVIQKVL 609
           SLQMYGCRVIQK +
Sbjct: 798 SLQMYGCRVIQKAI 811


>ref|XP_003537980.1| PREDICTED: pumilio homolog 2-like [Glycine max]
          Length = 1047

 Score =  122 bits (306), Expect(2) = 3e-28
 Identities = 59/69 (85%), Positives = 64/69 (92%)
 Frame = +3

Query: 267 SADQYGSRFIQQKLETATTDEKNMVYQEIFPQALTLMTNVFGNYVVQKFFEHGMAS*RRE 446
           SADQYGSRFIQQKLETATT+EKNMVYQEI P +L LMT+VFGNYVVQKFFEHG+AS RRE
Sbjct: 720 SADQYGSRFIQQKLETATTEEKNMVYQEIMPHSLALMTDVFGNYVVQKFFEHGLASQRRE 779

Query: 447 LTNKLVGHV 473
           L NKL+GHV
Sbjct: 780 LANKLLGHV 788



 Score = 29.6 bits (65), Expect(2) = 3e-28
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = +1

Query: 568 SLQMYGCRVIQKVL 609
           SLQMYGCRVIQK +
Sbjct: 792 SLQMYGCRVIQKAI 805


>ref|XP_003539618.1| PREDICTED: pumilio homolog 2-like [Glycine max]
          Length = 1033

 Score =  122 bits (306), Expect(2) = 3e-28
 Identities = 59/69 (85%), Positives = 64/69 (92%)
 Frame = +3

Query: 267 SADQYGSRFIQQKLETATTDEKNMVYQEIFPQALTLMTNVFGNYVVQKFFEHGMAS*RRE 446
           SADQYGSRFIQQKLETATT+EKNMVYQEI P AL LMT+VFGNYVVQKFFEHG+AS +RE
Sbjct: 706 SADQYGSRFIQQKLETATTEEKNMVYQEIMPHALALMTDVFGNYVVQKFFEHGLASQKRE 765

Query: 447 LTNKLVGHV 473
           L NKL+GHV
Sbjct: 766 LANKLLGHV 774



 Score = 29.6 bits (65), Expect(2) = 3e-28
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = +1

Query: 568 SLQMYGCRVIQKVL 609
           SLQMYGCRVIQK +
Sbjct: 778 SLQMYGCRVIQKAI 791


>ref|XP_003606712.1| Pumilio-like protein [Medicago truncatula]
           gi|355507767|gb|AES88909.1| Pumilio-like protein
           [Medicago truncatula]
          Length = 1025

 Score =  122 bits (306), Expect(2) = 3e-28
 Identities = 59/69 (85%), Positives = 63/69 (91%)
 Frame = +3

Query: 267 SADQYGSRFIQQKLETATTDEKNMVYQEIFPQALTLMTNVFGNYVVQKFFEHGMAS*RRE 446
           SADQYGSRFIQQKLETATT+EKNMVYQEI P AL LMT+VFGNYVVQKFFEHG+A  RRE
Sbjct: 699 SADQYGSRFIQQKLETATTEEKNMVYQEIMPHALALMTDVFGNYVVQKFFEHGLAPQRRE 758

Query: 447 LTNKLVGHV 473
           L NKL+GHV
Sbjct: 759 LANKLIGHV 767



 Score = 29.6 bits (65), Expect(2) = 3e-28
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = +1

Query: 568 SLQMYGCRVIQKVL 609
           SLQMYGCRVIQK +
Sbjct: 771 SLQMYGCRVIQKAI 784


>ref|XP_002314164.1| predicted protein [Populus trichocarpa] gi|222850572|gb|EEE88119.1|
           predicted protein [Populus trichocarpa]
          Length = 998

 Score =  122 bits (306), Expect(2) = 3e-28
 Identities = 59/69 (85%), Positives = 63/69 (91%)
 Frame = +3

Query: 267 SADQYGSRFIQQKLETATTDEKNMVYQEIFPQALTLMTNVFGNYVVQKFFEHGMAS*RRE 446
           SADQYGSRFIQQKLETATTDEKNMVYQEI PQAL LMT+VFGNYV+QKFFEHG+ S RRE
Sbjct: 682 SADQYGSRFIQQKLETATTDEKNMVYQEIMPQALALMTDVFGNYVIQKFFEHGLPSQRRE 741

Query: 447 LTNKLVGHV 473
           L  KL+GHV
Sbjct: 742 LAGKLLGHV 750



 Score = 29.6 bits (65), Expect(2) = 3e-28
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = +1

Query: 568 SLQMYGCRVIQKVL 609
           SLQMYGCRVIQK +
Sbjct: 754 SLQMYGCRVIQKAI 767


Top