BLASTX nr result

ID: Panax21_contig00008806 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008806
         (1382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321466.1| predicted protein [Populus trichocarpa] gi|2...   447   e-123
ref|XP_002266732.1| PREDICTED: D-aminoacyl-tRNA deacylase [Vitis...   445   e-122
ref|NP_001240127.1| uncharacterized protein LOC100808796 [Glycin...   424   e-116
ref|XP_003628728.1| D-aminoacyl-tRNA deacylase [Medicago truncat...   421   e-115
ref|XP_002875228.1| hypothetical protein ARALYDRAFT_322675 [Arab...   420   e-115

>ref|XP_002321466.1| predicted protein [Populus trichocarpa] gi|222868462|gb|EEF05593.1|
            predicted protein [Populus trichocarpa]
          Length = 316

 Score =  447 bits (1151), Expect = e-123
 Identities = 219/316 (69%), Positives = 248/316 (78%), Gaps = 1/316 (0%)
 Frame = +1

Query: 79   MVTLVVATTTDPASIGPASALLAMPGWHPGPFLQEDISSFVNKEVRLLKHDNSIVKEDHL 258
            MV L+VATT+DPASIGPASALLAMPGWH GP LQ+ +S FVNKEVRL+K DNS+VKEDHL
Sbjct: 1    MVILLVATTSDPASIGPASALLAMPGWHAGPSLQDAVS-FVNKEVRLIKVDNSLVKEDHL 59

Query: 259  DKRWEAATGEIVDEVIFLSKHTAVSNRPALTVHPIGVPHLREGDESXXXXXXXXXXXXXX 438
            DKRWE ATGE+VDE+IFLSKH A S+RPALTVHPIG PH+ EG+                
Sbjct: 60   DKRWEEATGELVDEIIFLSKHAASSSRPALTVHPIGTPHISEGEVLVAGGKPGWAAPPNP 119

Query: 439  RIGPWLRMLRSIAESHNLTPEFEVTLEATHHGPELNSPTMFVEIGSTEEYWKRQDAAQAI 618
            RIGPWLR+LR+IAES  LTPEFEVTLEATHHGP  NSPTMFVEIGSTEEYW+RQDAAQAI
Sbjct: 120  RIGPWLRLLRTIAESQKLTPEFEVTLEATHHGPLTNSPTMFVEIGSTEEYWRRQDAAQAI 179

Query: 619  ALLVWEXXXXXXXVAIGDWSRXXXXXXXXXXXXXXHYVPRHMDIILKDGAWVGHLLSGYS 798
            ALLVWE       +A GDW R              HYVPRHMDI+LKDG WVGHLLSGYS
Sbjct: 180  ALLVWEGLGLGGGIAEGDWGRNGGSNKILLGIGGGHYVPRHMDIVLKDGVWVGHLLSGYS 239

Query: 799  LPMEDP-KSKAEASLDGVGGTWREAIKVSFDTTKAAFPGGDILAHLDHKSFKGWQKNAIM 975
            LPMEDP +SK + + + V GTWRE+IKV+F+ TK+AFPGG+ILAHLDHKSFK WQ+ A+ 
Sbjct: 240  LPMEDPGQSKTQLNTEAVHGTWRESIKVAFEATKSAFPGGEILAHLDHKSFKSWQRTAVT 299

Query: 976  SFLAEQNIKVGKPGDF 1023
            +FL EQNIK+GK  DF
Sbjct: 300  TFLVEQNIKIGKASDF 315


>ref|XP_002266732.1| PREDICTED: D-aminoacyl-tRNA deacylase [Vitis vinifera]
            gi|297734103|emb|CBI15350.3| unnamed protein product
            [Vitis vinifera]
          Length = 316

 Score =  445 bits (1144), Expect = e-122
 Identities = 215/316 (68%), Positives = 246/316 (77%), Gaps = 1/316 (0%)
 Frame = +1

Query: 79   MVTLVVATTTDPASIGPASALLAMPGWHPGPFLQEDISSFVNKEVRLLKHDNSIVKEDHL 258
            MVTLVVATTTD AS+GPASALLAMPGW PGP LQE I SF + EVRLLKHDNSI+ EDHL
Sbjct: 1    MVTLVVATTTDAASLGPASALLAMPGWLPGPSLQE-IPSFKHGEVRLLKHDNSIISEDHL 59

Query: 259  DKRWEAATGEIVDEVIFLSKHTAVSNRPALTVHPIGVPHLREGDESXXXXXXXXXXXXXX 438
            DKRWE  TGE+V+E IFLSKHTAVSNRP+LTVHPIGVPHLR+ +                
Sbjct: 60   DKRWEELTGEVVEEAIFLSKHTAVSNRPSLTVHPIGVPHLRDDEVPPQGGKPGWAAPPSP 119

Query: 439  RIGPWLRMLRSIAESHNLTPEFEVTLEATHHGPELNSPTMFVEIGSTEEYWKRQDAAQAI 618
            RIGPWLR+L++IA+S NL PEFEVTLEATHHGPE+NSPTMFVEIGSTEE+WKRQDAAQ +
Sbjct: 120  RIGPWLRLLKTIAQSQNLIPEFEVTLEATHHGPEINSPTMFVEIGSTEEHWKRQDAAQVV 179

Query: 619  ALLVWEXXXXXXXVAIGDWSRXXXXXXXXXXXXXXHYVPRHMDIILKDGAWVGHLLSGYS 798
            A L+WE       V +GDW+R              HY PRHMDI+  DG WVGHLLSGY+
Sbjct: 180  ASLIWEGLGLGGGVKVGDWNRNDGNNKVLLGIGGGHYAPRHMDIVRNDGVWVGHLLSGYA 239

Query: 799  LPMEDP-KSKAEASLDGVGGTWREAIKVSFDTTKAAFPGGDILAHLDHKSFKGWQKNAIM 975
            LPMEDP KSKA+ +   VGGTW+ AIKV+++ TK++FPGG++LAHLD KSFK WQKNAI 
Sbjct: 240  LPMEDPGKSKAQGNAKDVGGTWKHAIKVAYEVTKSSFPGGEVLAHLDQKSFKSWQKNAIT 299

Query: 976  SFLAEQNIKVGKPGDF 1023
             FL EQNIK+GKPGDF
Sbjct: 300  EFLTEQNIKIGKPGDF 315


>ref|NP_001240127.1| uncharacterized protein LOC100808796 [Glycine max]
            gi|255646410|gb|ACU23684.1| unknown [Glycine max]
          Length = 316

 Score =  424 bits (1091), Expect = e-116
 Identities = 199/316 (62%), Positives = 241/316 (76%), Gaps = 1/316 (0%)
 Frame = +1

Query: 79   MVTLVVATTTDPASIGPASALLAMPGWHPGPFLQEDISSFVNKEVRLLKHDNSIVKEDHL 258
            MV L+VATT+DPASI PA+ALL MPGW PGP  Q+D+ S+VN+ VR+L H  SIV ED L
Sbjct: 1    MVALLVATTSDPASINPANALLGMPGWKPGPHFQDDMKSYVNEGVRVLVHGKSIVAEDEL 60

Query: 259  DKRWEAATGEIVDEVIFLSKHTAVSNRPALTVHPIGVPHLREGDESXXXXXXXXXXXXXX 438
            DKRWE  TGE++DEVIF SKHTA SN+PALTVHPIGVPHLR+GD                
Sbjct: 61   DKRWEEVTGEVIDEVIFFSKHTAASNKPALTVHPIGVPHLRQGDVPPQGGRPGWAALPNP 120

Query: 439  RIGPWLRMLRSIAESHNLTPEFEVTLEATHHGPELNSPTMFVEIGSTEEYWKRQDAAQAI 618
            R+GPWLR+L+++A++HNL PEFE+TLEATHHGP  N PTMF+EIGSTE+YWKRQDAAQ +
Sbjct: 121  RMGPWLRLLKNLAQAHNLVPEFEITLEATHHGPLTNKPTMFLEIGSTEDYWKRQDAAQVM 180

Query: 619  ALLVWEXXXXXXXVAIGDWSRXXXXXXXXXXXXXXHYVPRHMDIILKDGAWVGHLLSGYS 798
            A LVWE         +G+WSR              HY PRH+D++LKD  WVGHLLSGYS
Sbjct: 181  AQLVWEGLGLGGVSDVGNWSRENDNKKILLGIGGGHYAPRHVDVVLKDNVWVGHLLSGYS 240

Query: 799  LPMEDP-KSKAEASLDGVGGTWREAIKVSFDTTKAAFPGGDILAHLDHKSFKGWQKNAIM 975
            LPMEDP +SK E +++ +GGTWR++IK +++ T +AFPGG+ILAHLDHKSFKGWQKNAI 
Sbjct: 241  LPMEDPNQSKGEKNVE-IGGTWRQSIKAAYEATYSAFPGGEILAHLDHKSFKGWQKNAIT 299

Query: 976  SFLAEQNIKVGKPGDF 1023
             FLAEQNIK+GKP +F
Sbjct: 300  GFLAEQNIKIGKPNNF 315


>ref|XP_003628728.1| D-aminoacyl-tRNA deacylase [Medicago truncatula]
            gi|355522750|gb|AET03204.1| D-aminoacyl-tRNA deacylase
            [Medicago truncatula]
          Length = 317

 Score =  421 bits (1083), Expect = e-115
 Identities = 198/319 (62%), Positives = 240/319 (75%), Gaps = 4/319 (1%)
 Frame = +1

Query: 79   MVTLVVATTTDPASIGPASALLAMPGWHPGPFLQEDISSFVNKEVRLLKHDNSIVKEDHL 258
            MV+L+VATT+DPASI PA+ALLAMPGW PGP  Q+D+ SFVN+ +R+L H  SIV ED+L
Sbjct: 1    MVSLLVATTSDPASINPANALLAMPGWQPGPHFQDDMKSFVNEGLRVLLHGKSIVVEDYL 60

Query: 259  DKRWEAATGEIVDEVIFLSKHTAVSNRPALTVHPIGVPHLREGDESXXXXXXXXXXXXXX 438
            D RWE  TGE+VDEVIFLSKHTA SN+PALTVHPIGVPHLREGD                
Sbjct: 61   DTRWEEVTGEVVDEVIFLSKHTAASNKPALTVHPIGVPHLREGDVPPQGGKPGWAALPNP 120

Query: 439  RIGPWLRMLRSIAESHNLTPEFEVTLEATHHGPELNSPTMFVEIGSTEEYWKRQDAAQAI 618
            RIGPW+R+L++IA++HNL PEFE+TLEATHHGP  N PTMF+EIGSTE+YWKRQDAAQ +
Sbjct: 121  RIGPWIRLLKNIAQAHNLVPEFEITLEATHHGPMTNKPTMFLEIGSTEDYWKRQDAAQVM 180

Query: 619  A----LLVWEXXXXXXXVAIGDWSRXXXXXXXXXXXXXXHYVPRHMDIILKDGAWVGHLL 786
            A     LVWE         +G+WSR              HYVPRHM+++LKDG WVGH+L
Sbjct: 181  AQVEWTLVWEGLGLGGGTDVGNWSRENDKKKVLLGIGGGHYVPRHMNVVLKDGVWVGHVL 240

Query: 787  SGYSLPMEDPKSKAEASLDGVGGTWREAIKVSFDTTKAAFPGGDILAHLDHKSFKGWQKN 966
            SGYS+PMEDPK +       +GGTW+++IK +++ TK+AFPGG+I+AHLD KSFKGWQKN
Sbjct: 241  SGYSVPMEDPKGETNVE---IGGTWKQSIKAAYEATKSAFPGGEIIAHLDQKSFKGWQKN 297

Query: 967  AIMSFLAEQNIKVGKPGDF 1023
            AI  FL EQNIK+GKP +F
Sbjct: 298  AITGFLTEQNIKIGKPNNF 316


>ref|XP_002875228.1| hypothetical protein ARALYDRAFT_322675 [Arabidopsis lyrata subsp.
            lyrata] gi|297321066|gb|EFH51487.1| hypothetical protein
            ARALYDRAFT_322675 [Arabidopsis lyrata subsp. lyrata]
          Length = 361

 Score =  420 bits (1079), Expect = e-115
 Identities = 200/318 (62%), Positives = 237/318 (74%), Gaps = 1/318 (0%)
 Frame = +1

Query: 73   REMVTLVVATTTDPASIGPASALLAMPGWHPGPFLQEDISSFVNKEVRLLKHDNSIVKED 252
            R+MVTL+VATT+DPASI PA+ALLAMPGW  GP L  DI SF NK+ R+++HD SIVKED
Sbjct: 43   RKMVTLIVATTSDPASINPAAALLAMPGWIAGPILPPDIKSFSNKQTRVIQHDRSIVKED 102

Query: 253  HLDKRWEAATGEIVDEVIFLSKHTAVSNRPALTVHPIGVPHLREGDESXXXXXXXXXXXX 432
             LD RWE ATGE++DEVIFLS+HTAVSNRPALTVHPIGV HL++G+              
Sbjct: 103  DLDLRWEEATGEVIDEVIFLSRHTAVSNRPALTVHPIGVLHLKDGESPPQGGKPGWAALP 162

Query: 433  XXRIGPWLRMLRSIAESHNLTPEFEVTLEATHHGPELNSPTMFVEIGSTEEYWKRQDAAQ 612
              RIGPW R+L+ +AE+H L PEFE+TLEATHHGP  N PTMF+EIGSTEEYWKR DAAQ
Sbjct: 163  NPRIGPWFRLLKKMAEAHGLVPEFEITLEATHHGPITNKPTMFLEIGSTEEYWKRDDAAQ 222

Query: 613  AIALLVWEXXXXXXXVAIGDWSRXXXXXXXXXXXXXXHYVPRHMDIILKDGAWVGHLLSG 792
             +ALL+WE        A+G+W+               HY PRHMDI+LKD  WVGHLLSG
Sbjct: 223  VMALLMWEGLGLGGGEAVGNWNSETGKRKVLLGIGGGHYAPRHMDIVLKDDIWVGHLLSG 282

Query: 793  YSLPMEDP-KSKAEASLDGVGGTWREAIKVSFDTTKAAFPGGDILAHLDHKSFKGWQKNA 969
            YSLPMEDP ++K     + +GG WR++IK +F+ TKAAFPGG+ILAHLDHKSFKGWQK A
Sbjct: 283  YSLPMEDPTQTKTTPVENYIGGNWRQSIKAAFEATKAAFPGGEILAHLDHKSFKGWQKKA 342

Query: 970  IMSFLAEQNIKVGKPGDF 1023
            I  FL E++I VGKP DF
Sbjct: 343  ITEFLGEESINVGKPNDF 360


Top