BLASTX nr result

ID: Panax21_contig00008788 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008788
         (1276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27690.3| unnamed protein product [Vitis vinifera]              562   e-158
ref|XP_002268418.1| PREDICTED: E3 ubiquitin-protein ligase CHFR-...   559   e-157
ref|XP_002330437.1| predicted protein [Populus trichocarpa] gi|2...   556   e-156
ref|NP_001242840.1| uncharacterized protein LOC100805618 [Glycin...   498   e-138
ref|XP_003630425.1| E3 ubiquitin-protein ligase CHFR [Medicago t...   496   e-138

>emb|CBI27690.3| unnamed protein product [Vitis vinifera]
          Length = 1150

 Score =  562 bits (1449), Expect = e-158
 Identities = 266/399 (66%), Positives = 318/399 (79%), Gaps = 2/399 (0%)
 Frame = +2

Query: 86   KIRSLQKQIK-KKMESGQSSGSKPSDDI-WAKLVSSDLRFSDVELMSDEMVVCSEVKVPS 259
            K R L ++I+  KME G+SS + PS +I WAKLV SD R+S+VEL  DEMV+CS+V  PS
Sbjct: 676  KDRHLNQRIQGMKMEFGESSAANPSQEIVWAKLVPSDSRYSEVELRLDEMVICSDVMFPS 735

Query: 260  PEKQEWCKITRNSDLCSATMQNKSSNVVLVDGTIVQTEDTCLIKCGSEIIPGLVEDGSVS 439
             +KQEWCK+TRNSD CSAT+QNKSSN +LVD   + +ED+ +IKCGSEIIPG   +G +S
Sbjct: 736  FDKQEWCKVTRNSDQCSATIQNKSSNTILVDEVAIPSEDSIVIKCGSEIIPGPKNEGYLS 795

Query: 440  YIFRVMPTEQCSTKKLKIFLDVEHAKCSICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQ 619
            Y F VM  ++   ++LKI LDVEHAKCSICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQ
Sbjct: 796  YRFEVMSPQESIKEQLKICLDVEHAKCSICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQ 855

Query: 620  EKHSSVLCPQCRAVVQYVGRNHFLHNIEEDILQSDSSLKRCDEEVALLDSYAVIKSPLVI 799
             KHS+VLCPQCRA+VQ+VGRNHFL  IEE ILQ+D SL+R DEEVA+L+S+A I+S LV+
Sbjct: 856  NKHSNVLCPQCRAIVQFVGRNHFLRTIEETILQADPSLRRSDEEVAVLESHASIQSNLVL 915

Query: 800  NTGXXXXXXXXXXXXXEETDVVEHPCPQCGTQYSGFQCNRNTIHLQCHACGGMMPSRSNS 979
             TG             EE++ +E PCPQCG +Y+GF CN NT+HLQCHACGGMMPSR++ 
Sbjct: 916  KTGTKLGRKRAHSSLNEESEELEFPCPQCGAEYAGFLCNPNTVHLQCHACGGMMPSRNDI 975

Query: 980  SVPQHCIGCDRAFCGAYWHAQRVSGIDSHPMCSQETLKPISERTATRIPVLAHDKNRHEQ 1159
             VPQHC+GCDRAFCGAYWH QR  G DSHP+C  ET KPIS+ T +RIP LAH+ N HEQ
Sbjct: 976  GVPQHCLGCDRAFCGAYWHTQRFGGSDSHPVCCHETFKPISDHTISRIPTLAHENNWHEQ 1035

Query: 1160 DITERCIRQMGRTLQDVIREWITKLNNREIDRTRMPLNH 1276
            +ITERCIRQMG+TLQDVI E + +L+NREIDRTRM LNH
Sbjct: 1036 NITERCIRQMGKTLQDVISELLIRLSNREIDRTRMQLNH 1074


>ref|XP_002268418.1| PREDICTED: E3 ubiquitin-protein ligase CHFR-like [Vitis vinifera]
          Length = 462

 Score =  559 bits (1440), Expect = e-157
 Identities = 261/386 (67%), Positives = 310/386 (80%), Gaps = 1/386 (0%)
 Frame = +2

Query: 122  MESGQSSGSKPSDDI-WAKLVSSDLRFSDVELMSDEMVVCSEVKVPSPEKQEWCKITRNS 298
            ME G+SS + PS +I WAKLV SD R+S+VEL  DEMV+CS+V  PS +KQEWCK+TRNS
Sbjct: 1    MEFGESSAANPSQEIVWAKLVPSDSRYSEVELRLDEMVICSDVMFPSFDKQEWCKVTRNS 60

Query: 299  DLCSATMQNKSSNVVLVDGTIVQTEDTCLIKCGSEIIPGLVEDGSVSYIFRVMPTEQCST 478
            D CSAT+QNKSSN +LVD   + +ED+ +IKCGSEIIPG   +G +SY F VM  ++   
Sbjct: 61   DQCSATIQNKSSNTILVDEVAIPSEDSIVIKCGSEIIPGPKNEGYLSYRFEVMSPQESIK 120

Query: 479  KKLKIFLDVEHAKCSICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQEKHSSVLCPQCRA 658
            ++LKI LDVEHAKCSICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQ KHS+VLCPQCRA
Sbjct: 121  EQLKICLDVEHAKCSICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQNKHSNVLCPQCRA 180

Query: 659  VVQYVGRNHFLHNIEEDILQSDSSLKRCDEEVALLDSYAVIKSPLVINTGXXXXXXXXXX 838
            +VQ+VGRNHFL  IEE ILQ+D SL+R DEEVA+L+S+A I+S LV+ TG          
Sbjct: 181  IVQFVGRNHFLRTIEETILQADPSLRRSDEEVAVLESHASIQSNLVLKTGTKLGRKRAHS 240

Query: 839  XXXEETDVVEHPCPQCGTQYSGFQCNRNTIHLQCHACGGMMPSRSNSSVPQHCIGCDRAF 1018
               EE++ +E PCPQCG +Y+GF CN NT+HLQCHACGGMMPSR++  VPQHC+GCDRAF
Sbjct: 241  SLNEESEELEFPCPQCGAEYAGFLCNPNTVHLQCHACGGMMPSRNDIGVPQHCLGCDRAF 300

Query: 1019 CGAYWHAQRVSGIDSHPMCSQETLKPISERTATRIPVLAHDKNRHEQDITERCIRQMGRT 1198
            CGAYWH QR  G DSHP+C  ET KPIS+ T +RIP LAH+ N HEQ+ITERCIRQMG+T
Sbjct: 301  CGAYWHTQRFGGSDSHPVCCHETFKPISDHTISRIPTLAHENNWHEQNITERCIRQMGKT 360

Query: 1199 LQDVIREWITKLNNREIDRTRMPLNH 1276
            LQDVI E + +L+NREIDRTRM LNH
Sbjct: 361  LQDVISELLIRLSNREIDRTRMQLNH 386


>ref|XP_002330437.1| predicted protein [Populus trichocarpa] gi|222871849|gb|EEF08980.1|
            predicted protein [Populus trichocarpa]
          Length = 465

 Score =  556 bits (1434), Expect = e-156
 Identities = 263/386 (68%), Positives = 303/386 (78%), Gaps = 2/386 (0%)
 Frame = +2

Query: 125  ESGQSSGSKPSDDIWAKLVSSDLRFSDVELMSDEMVVCSEVKVPSPEKQEWCKITRNSDL 304
            E    S S  S++ WAKLV SD R+SDVE+ S+EMV+CSE+   S EK EWCKITRNSD 
Sbjct: 5    ECSSGSNSSSSNEAWAKLVPSDSRYSDVEIRSNEMVICSEITSTSLEKHEWCKITRNSDQ 64

Query: 305  CSATMQNKSSNVVLVDGTIVQTEDTCLIKCGSEIIPGLVEDGSVSYIFRVMPTEQCSTKK 484
             SA MQNKS N +LVD   VQ ED  +I CGSEIIPG   +G +SY F++MP E   T+ 
Sbjct: 65   SSAMMQNKSLNTILVDEATVQNEDDVVINCGSEIIPGPAREGYLSYRFKLMPRESF-TRW 123

Query: 485  LKIFLDVEHAKCSICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQEKHSSVLCPQCRAVV 664
            LK+ +D EHAKCSICLN+WHDVVTVAPCLHNFCNGCFSEWLRRSQE+H+SVLCPQCRAVV
Sbjct: 124  LKVSIDAEHAKCSICLNVWHDVVTVAPCLHNFCNGCFSEWLRRSQERHASVLCPQCRAVV 183

Query: 665  QYVGRNHFLHNIEEDILQSDSSLKRCDEEVALLDSYAVIKSPLVINTGXXXXXXXXXXXX 844
            Q+VGRNHFLH+IEED+LQ+DSSLK+ DEE+ LLDSYA IKS L+I TG            
Sbjct: 184  QFVGRNHFLHSIEEDVLQADSSLKQSDEEIILLDSYASIKSNLIIQTGKKHRRKRPHSIL 243

Query: 845  XEETDVVEHPCPQCGTQYSGFQCNRNTIHLQCHACGGMMPSRSNSSVPQH--CIGCDRAF 1018
              E +V + PCPQCGT+YSGF CN+NTIHLQC ACGGMMPSR++  VPQH  C+GCDR F
Sbjct: 244  DAENEVADFPCPQCGTEYSGFHCNQNTIHLQCQACGGMMPSRADIGVPQHCMCLGCDRVF 303

Query: 1019 CGAYWHAQRVSGIDSHPMCSQETLKPISERTATRIPVLAHDKNRHEQDITERCIRQMGRT 1198
            CGAYWHAQ VS  D+H +CS E  KPISE   +RIP LAH+KNRHEQDITERCI QMG+T
Sbjct: 304  CGAYWHAQGVSRSDTHSICSHENFKPISEHAVSRIPFLAHEKNRHEQDITERCIGQMGKT 363

Query: 1199 LQDVIREWITKLNNREIDRTRMPLNH 1276
            LQDVI +WI KLNNREIDR+RMPLNH
Sbjct: 364  LQDVISDWIGKLNNREIDRSRMPLNH 389


>ref|NP_001242840.1| uncharacterized protein LOC100805618 [Glycine max]
            gi|255645319|gb|ACU23156.1| unknown [Glycine max]
          Length = 466

 Score =  498 bits (1283), Expect = e-138
 Identities = 231/380 (60%), Positives = 291/380 (76%)
 Frame = +2

Query: 137  SSGSKPSDDIWAKLVSSDLRFSDVELMSDEMVVCSEVKVPSPEKQEWCKITRNSDLCSAT 316
            S+ + PSD+IWAKLV SD R+SDV++ SDE V+ SE+   S +K  WCKI RN DLCSAT
Sbjct: 12   SASANPSDEIWAKLVLSDERYSDVQISSDEKVISSEISATSNDKHSWCKIVRNPDLCSAT 71

Query: 317  MQNKSSNVVLVDGTIVQTEDTCLIKCGSEIIPGLVEDGSVSYIFRVMPTEQCSTKKLKIF 496
            M+NKS N +LVDG  V ++DT +IK GS+IIPG   +G VSY F +M       ++LKI 
Sbjct: 72   MENKSQNTILVDGVKVHSDDTIVIKDGSQIIPGPDREGFVSYKFHIMSGPDICQRQLKIC 131

Query: 497  LDVEHAKCSICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQEKHSSVLCPQCRAVVQYVG 676
            +DV HAKCSICLN+WHDVVTVAPCLHNFCNGCFSEWLRRS+E+HS+VLCPQCRAVV + G
Sbjct: 132  VDVNHAKCSICLNLWHDVVTVAPCLHNFCNGCFSEWLRRSKERHSAVLCPQCRAVVHFAG 191

Query: 677  RNHFLHNIEEDILQSDSSLKRCDEEVALLDSYAVIKSPLVINTGXXXXXXXXXXXXXEET 856
            +NHFL  I ED+L++DSSL+R  +EVALLD+YA+++S LVI +G             +++
Sbjct: 192  KNHFLRTIAEDMLRADSSLQRSHDEVALLDTYALVRSNLVIGSG-KKNRKRAYTPLDDQS 250

Query: 857  DVVEHPCPQCGTQYSGFQCNRNTIHLQCHACGGMMPSRSNSSVPQHCIGCDRAFCGAYWH 1036
            D   H C QC T+ +GF+C  +T+HLQC ACGGMMPSR+   +PQ+C GCDR+FCGAYWH
Sbjct: 251  DGTYHQCQQCVTEVAGFRCKYDTVHLQCQACGGMMPSRTGFGIPQYCSGCDRSFCGAYWH 310

Query: 1037 AQRVSGIDSHPMCSQETLKPISERTATRIPVLAHDKNRHEQDITERCIRQMGRTLQDVIR 1216
            A  V+G  S+P+CSQ+TL+PIS+ + +RIP+LAH+KN HEQ+IT+ CI QMGRTL DVI 
Sbjct: 311  ALGVTGNGSYPVCSQDTLRPISDHSISRIPLLAHEKNLHEQNITDSCIGQMGRTLPDVIS 370

Query: 1217 EWITKLNNREIDRTRMPLNH 1276
            EWI K  NREIDR RM LNH
Sbjct: 371  EWIAKFENREIDRRRMMLNH 390


>ref|XP_003630425.1| E3 ubiquitin-protein ligase CHFR [Medicago truncatula]
            gi|355524447|gb|AET04901.1| E3 ubiquitin-protein ligase
            CHFR [Medicago truncatula]
          Length = 471

 Score =  496 bits (1276), Expect = e-138
 Identities = 237/381 (62%), Positives = 291/381 (76%), Gaps = 1/381 (0%)
 Frame = +2

Query: 137  SSGSKPSDDIWAKLVSSDLRFSDVELMSDEMVVCSEVKVPSPEKQEWCKITRNSDLCSAT 316
            S+ +KPSD+IWAKLV SD R+ DVE+ SD+  + SE+   S +K  WCKI RNSDLCSAT
Sbjct: 15   SASAKPSDEIWAKLVQSDSRYPDVEIRSDKGQIRSEISTASCDKHRWCKIVRNSDLCSAT 74

Query: 317  MQNKSSNVVLVDGTIVQTEDTCLIKCGSEIIPGLVEDGSVSYIFRVMPTEQCSTKKLKIF 496
            ++NKSSN +LVDG  V   DT +IK  SEIIPG  ++G VSY F+++ + +     LKI 
Sbjct: 75   LKNKSSNTILVDGAEVGKGDTVVIKDRSEIIPGPAKEGFVSYKFQIVSSPEICQTLLKIC 134

Query: 497  LDVEHAKCSICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQEKHSSVLCPQCRAVVQYVG 676
            +DV+HAKCSICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQEK S+VLCPQCRAVVQ+VG
Sbjct: 135  VDVDHAKCSICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQEKRSTVLCPQCRAVVQFVG 194

Query: 677  RNHFLHNIEEDILQSDSSLKRCDEEVALLDSYAVIKSPLVINTG-XXXXXXXXXXXXXEE 853
            +NHFL  I ED++++DSSL+R  +EVALLD+YA ++S LVI +G               +
Sbjct: 195  KNHFLRTIAEDMVKADSSLRRSHDEVALLDTYASVRSNLVIGSGKKSRKRERANTTMVNQ 254

Query: 854  TDVVEHPCPQCGTQYSGFQCNRNTIHLQCHACGGMMPSRSNSSVPQHCIGCDRAFCGAYW 1033
            +D  +H C QC T   GFQC+ +TIHLQC  CGGMMPSR+   VPQ+C+GCDR FCGAYW
Sbjct: 255  SDGPDHHCSQCVTVVGGFQCDPSTIHLQCQECGGMMPSRTGLGVPQYCLGCDRPFCGAYW 314

Query: 1034 HAQRVSGIDSHPMCSQETLKPISERTATRIPVLAHDKNRHEQDITERCIRQMGRTLQDVI 1213
             A  V+G  S+P+CS +TL+PISE T + IP++AH+KN HEQ+ITE CIRQMGRTLQDVI
Sbjct: 315  SALGVTGSGSYPVCSPDTLRPISEHTISGIPLVAHEKNLHEQNITESCIRQMGRTLQDVI 374

Query: 1214 REWITKLNNREIDRTRMPLNH 1276
             EWI KLNNREID TR+ LNH
Sbjct: 375  SEWIAKLNNREIDTTRLMLNH 395


Top