BLASTX nr result

ID: Panax21_contig00008781 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008781
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267914.1| PREDICTED: tubby-like F-box protein 8-like [...   232   2e-59
gb|AED87506.1| F-box protein [Gossypium hirsutum]                     231   5e-59
ref|XP_002306697.1| f-box family protein [Populus trichocarpa] g...   229   2e-58
ref|XP_002302178.1| f-box family protein [Populus trichocarpa] g...   229   2e-58
gb|ABK94204.1| unknown [Populus trichocarpa]                          229   2e-58

>ref|XP_002267914.1| PREDICTED: tubby-like F-box protein 8-like [Vitis vinifera]
          Length = 425

 Score =  232 bits (592), Expect = 2e-59
 Identities = 110/118 (93%), Positives = 116/118 (98%)
 Frame = +1

Query: 1   SWREMCKEIVRNPELSGKLTFPVSLKQPGSRDGTIQCFIKRDKANLTYHLFLCLSPALLV 180
           SWREMCKEIV++PE SGKLTFP+SLKQPG RDGTIQCFIKRDK+NLTYHLFLCLSPALLV
Sbjct: 90  SWREMCKEIVKSPEFSGKLTFPISLKQPGPRDGTIQCFIKRDKSNLTYHLFLCLSPALLV 149

Query: 181 ENGKFLLSAKRNRRTTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKFVIYDTQPPH 354
           ENGKFLLSAKRNRRTTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKF+IYDTQPP+
Sbjct: 150 ENGKFLLSAKRNRRTTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPPY 207


>gb|AED87506.1| F-box protein [Gossypium hirsutum]
          Length = 424

 Score =  231 bits (589), Expect = 5e-59
 Identities = 111/118 (94%), Positives = 115/118 (97%)
 Frame = +1

Query: 1   SWREMCKEIVRNPELSGKLTFPVSLKQPGSRDGTIQCFIKRDKANLTYHLFLCLSPALLV 180
           SWREMCKEIVR PE SGK+TFPVSLKQPGSRDGTIQCFIKRDK+NLTYHLFLCLSPALLV
Sbjct: 90  SWREMCKEIVRCPEFSGKITFPVSLKQPGSRDGTIQCFIKRDKSNLTYHLFLCLSPALLV 149

Query: 181 ENGKFLLSAKRNRRTTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKFVIYDTQPPH 354
           ENGKFLLSAKR RRTTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKF+IYDTQPP+
Sbjct: 150 ENGKFLLSAKRTRRTTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPPY 207


>ref|XP_002306697.1| f-box family protein [Populus trichocarpa]
           gi|222856146|gb|EEE93693.1| f-box family protein
           [Populus trichocarpa]
          Length = 423

 Score =  229 bits (584), Expect = 2e-58
 Identities = 109/118 (92%), Positives = 114/118 (96%)
 Frame = +1

Query: 1   SWREMCKEIVRNPELSGKLTFPVSLKQPGSRDGTIQCFIKRDKANLTYHLFLCLSPALLV 180
           +WREMCKEIVRNPE SGK+TFPVSLKQPG RDGTIQCFIKRDK+ LTYHLFLCLSPALLV
Sbjct: 90  AWREMCKEIVRNPEFSGKITFPVSLKQPGPRDGTIQCFIKRDKSKLTYHLFLCLSPALLV 149

Query: 181 ENGKFLLSAKRNRRTTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKFVIYDTQPPH 354
           ENGKFLLSAKR RRTTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKF+IYDTQPP+
Sbjct: 150 ENGKFLLSAKRTRRTTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPPY 207


>ref|XP_002302178.1| f-box family protein [Populus trichocarpa]
           gi|222843904|gb|EEE81451.1| f-box family protein
           [Populus trichocarpa]
          Length = 424

 Score =  229 bits (584), Expect = 2e-58
 Identities = 108/118 (91%), Positives = 115/118 (97%)
 Frame = +1

Query: 1   SWREMCKEIVRNPELSGKLTFPVSLKQPGSRDGTIQCFIKRDKANLTYHLFLCLSPALLV 180
           +WREMCKEIVR+PE SGK+TFPVSLKQPGSRDGTIQCFIKRDK+NLTYHLFLCLSPALLV
Sbjct: 90  AWREMCKEIVRSPEFSGKITFPVSLKQPGSRDGTIQCFIKRDKSNLTYHLFLCLSPALLV 149

Query: 181 ENGKFLLSAKRNRRTTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKFVIYDTQPPH 354
           ENGKFLLSAKR RRT CTEYVISMDADN+SRSSSTYIGKLRSNFLGTKF+IYDTQPP+
Sbjct: 150 ENGKFLLSAKRKRRTACTEYVISMDADNVSRSSSTYIGKLRSNFLGTKFIIYDTQPPY 207


>gb|ABK94204.1| unknown [Populus trichocarpa]
          Length = 423

 Score =  229 bits (584), Expect = 2e-58
 Identities = 109/118 (92%), Positives = 114/118 (96%)
 Frame = +1

Query: 1   SWREMCKEIVRNPELSGKLTFPVSLKQPGSRDGTIQCFIKRDKANLTYHLFLCLSPALLV 180
           +WREMCKEIVRNPE SGK+TFPVSLKQPG RDGTIQCFIKRDK+ LTYHLFLCLSPALLV
Sbjct: 90  AWREMCKEIVRNPEFSGKITFPVSLKQPGPRDGTIQCFIKRDKSKLTYHLFLCLSPALLV 149

Query: 181 ENGKFLLSAKRNRRTTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKFVIYDTQPPH 354
           ENGKFLLSAKR RRTTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKF+IYDTQPP+
Sbjct: 150 ENGKFLLSAKRTRRTTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPPY 207


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