BLASTX nr result

ID: Panax21_contig00008701 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008701
         (842 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277320.2| PREDICTED: uncharacterized protein LOC100251...   314   2e-83
emb|CBI30249.3| unnamed protein product [Vitis vinifera]              314   2e-83
ref|XP_002528590.1| conserved hypothetical protein [Ricinus comm...   240   3e-61
ref|XP_003553583.1| PREDICTED: uncharacterized protein LOC100811...   229   4e-58
ref|XP_003625749.1| Pre-mRNA cleavage complex 2 protein Pcf11 [M...   221   2e-55

>ref|XP_002277320.2| PREDICTED: uncharacterized protein LOC100251089 [Vitis vinifera]
          Length = 801

 Score =  314 bits (804), Expect = 2e-83
 Identities = 164/265 (61%), Positives = 194/265 (73%), Gaps = 2/265 (0%)
 Frame = +3

Query: 3   HPGMRHLFGTWKGVFPSQPLQIIEKELGFTPAANGSASGMTTSKTDSQSQRQAHSIHVNP 182
           HPGMRHLFGTWKGVFP  PLQ+IEKELGF PA NGS+ G+ TS++DSQSQR  HSIHVNP
Sbjct: 169 HPGMRHLFGTWKGVFPLAPLQMIEKELGFPPAINGSSPGIATSRSDSQSQRPPHSIHVNP 228

Query: 183 KYLEARQRLQESSRAKGSTNDIIGNLVNSPEDTERLERSTNLNSGRQRADPRLKIYNIQR 362
           KYLEARQRLQ+SSR KG+ ND+ G +VNS ED +RL+R+  +N+GR   D  L   +IQ 
Sbjct: 229 KYLEARQRLQQSSRTKGAANDVTGTMVNSTEDADRLDRTAGINAGRPWDD--LPAKSIQH 286

Query: 363 PPRDAVTECVQEK-GSAYGEYEYGTELSRHSASGIGKTSDRVTEQGIDKAWYGAGS-ITE 536
             R+A+ E V++K G+ YG+YEYGT+LSR+   GIG+ S    EQG DK WY AG  + E
Sbjct: 287 SHREAIGELVEKKIGAPYGDYEYGTDLSRNPGLGIGRPS----EQGHDKPWYKAGGRVVE 342

Query: 537 TISSQRNDFDIKLGLPHYSAHRSANNDAMSQPTHNLVTSRNSGEMDRSWKNSEEEEYMWD 716
           T SSQRN FDIK G P+Y A RSAN DA  QPT + V   NSG M RSWKNSEEEEYMWD
Sbjct: 343 TFSSQRNGFDIKHGFPNYPAPRSANADAHLQPTQSTVNRSNSG-MSRSWKNSEEEEYMWD 401

Query: 717 DLNSGSTIHGASRKSKRDPRLTDDS 791
           D+NS  T H A+  SK+D    DDS
Sbjct: 402 DMNSKMTEHSAANHSKKDRWTPDDS 426


>emb|CBI30249.3| unnamed protein product [Vitis vinifera]
          Length = 1049

 Score =  314 bits (804), Expect = 2e-83
 Identities = 164/265 (61%), Positives = 194/265 (73%), Gaps = 2/265 (0%)
 Frame = +3

Query: 3    HPGMRHLFGTWKGVFPSQPLQIIEKELGFTPAANGSASGMTTSKTDSQSQRQAHSIHVNP 182
            HPGMRHLFGTWKGVFP  PLQ+IEKELGF PA NGS+ G+ TS++DSQSQR  HSIHVNP
Sbjct: 248  HPGMRHLFGTWKGVFPLAPLQMIEKELGFPPAINGSSPGIATSRSDSQSQRPPHSIHVNP 307

Query: 183  KYLEARQRLQESSRAKGSTNDIIGNLVNSPEDTERLERSTNLNSGRQRADPRLKIYNIQR 362
            KYLEARQRLQ+SSR KG+ ND+ G +VNS ED +RL+R+  +N+GR   D  L   +IQ 
Sbjct: 308  KYLEARQRLQQSSRTKGAANDVTGTMVNSTEDADRLDRTAGINAGRPWDD--LPAKSIQH 365

Query: 363  PPRDAVTECVQEK-GSAYGEYEYGTELSRHSASGIGKTSDRVTEQGIDKAWYGAGS-ITE 536
              R+A+ E V++K G+ YG+YEYGT+LSR+   GIG+ S    EQG DK WY AG  + E
Sbjct: 366  SHREAIGELVEKKIGAPYGDYEYGTDLSRNPGLGIGRPS----EQGHDKPWYKAGGRVVE 421

Query: 537  TISSQRNDFDIKLGLPHYSAHRSANNDAMSQPTHNLVTSRNSGEMDRSWKNSEEEEYMWD 716
            T SSQRN FDIK G P+Y A RSAN DA  QPT + V   NSG M RSWKNSEEEEYMWD
Sbjct: 422  TFSSQRNGFDIKHGFPNYPAPRSANADAHLQPTQSTVNRSNSG-MSRSWKNSEEEEYMWD 480

Query: 717  DLNSGSTIHGASRKSKRDPRLTDDS 791
            D+NS  T H A+  SK+D    DDS
Sbjct: 481  DMNSKMTEHSAANHSKKDRWTPDDS 505


>ref|XP_002528590.1| conserved hypothetical protein [Ricinus communis]
           gi|223531986|gb|EEF33798.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1123

 Score =  240 bits (612), Expect = 3e-61
 Identities = 135/267 (50%), Positives = 176/267 (65%), Gaps = 5/267 (1%)
 Frame = +3

Query: 3   HPGMRHLFGTWKGVFPSQPLQIIEKELGFTPAANGSASGMTTSKTDSQSQRQAHSIHVNP 182
           H  MRHLFGTWKGVFP Q LQ+IEKELGF  A NGS+S   TS+ DSQS+R   SIH+NP
Sbjct: 175 HSSMRHLFGTWKGVFPPQSLQMIEKELGFASALNGSSSSAATSRLDSQSRR---SIHINP 231

Query: 183 KYLEARQRLQESSRAKGSTNDIIGNLVNSPEDTERLERSTNLNSGRQRADPRLKIYNIQR 362
           K LE  Q LQ+SSRAKG   D+   + N+ ED ER ER+ ++ +GR   DP +K++NIQ 
Sbjct: 232 KILEI-QHLQQSSRAKGMATDLTVPIPNTAEDVERPERAASIAAGRSWVDPPVKMHNIQH 290

Query: 363 PPRDAVTECVQEK--GSAYGEYEYGTELSRHSASGIGKTSDRVTEQGIDKAWYGAG-SIT 533
             R+ +++   EK  GS YG++EY +E+SR S  GIG+TS RV  +G +K WYGAG S T
Sbjct: 291 TQREILSDPGHEKKIGSTYGDFEYNSEISRISGLGIGRTSGRVAAEGHEKPWYGAGNSAT 350

Query: 534 ETISSQRNDFDIKLGLPHYSAHRSANNDAMSQPTHNLVTSRNSGEMDRSWKNSEEEEYMW 713
           ETIS Q+N F +K G P+YS  +  N D   Q T +   S+++  +  SWKNSEEEE+MW
Sbjct: 351 ETISGQKNGFTVKHGFPNYSTSKPVNVDLHLQRTQS-NASKSTTAVSASWKNSEEEEFMW 409

Query: 714 DDLNSGSTIHGASRKS--KRDPRLTDD 788
            D++S  + H A+  S   R  R T D
Sbjct: 410 -DMHSRLSDHDAANLSITSRKDRWTPD 435


>ref|XP_003553583.1| PREDICTED: uncharacterized protein LOC100811629 [Glycine max]
          Length = 1028

 Score =  229 bits (585), Expect = 4e-58
 Identities = 129/268 (48%), Positives = 168/268 (62%), Gaps = 6/268 (2%)
 Frame = +3

Query: 3   HPGMRHLFGTWKGVFPSQPLQIIEKELGFTPAANGSASGMTTSKTDSQSQRQAHSIHVNP 182
           H  M+HLFGTWKGVFP Q LQ+IEKELGF PA N SAS   T ++D QSQR  HSIHVNP
Sbjct: 166 HSSMQHLFGTWKGVFPPQSLQMIEKELGFAPAVNSSASVSATVRSDLQSQRPPHSIHVNP 225

Query: 183 KYLEARQRLQESSRAKGSTNDIIGNLVNSPEDTERLERSTNLNSGRQRADPRLKIYNIQR 362
           KYLE RQRLQ+SSR+KG  ND+ G ++NS ED+ER +R+  L++ R   DPR+ + N Q 
Sbjct: 226 KYLE-RQRLQQSSRSKGVVNDMTGAVLNSNEDSERPDRA--LSAARPWLDPRINMLNNQH 282

Query: 363 PPRDAVTECVQEK---GSAYGEYEYGTELSRHSASGIGKTSDRVTEQGIDKAWYGA-GSI 530
             RD   + V EK   GS+YG  EY + +S +  SG G+T  ++ + G DK W+   G  
Sbjct: 283 THRDVFNDSVPEKSMDGSSYGGSEYSSVISSNLVSGAGRTGSKLIDLGHDKTWFKTDGGD 342

Query: 531 TETISSQRNDFDIKLGLPHYSAHRSANNDAMSQPTHNLVTSRNSGEMDRSWKNSEEEEYM 710
            +T S QRN F++K    +  A +  N DA  QP  +    RN+  M  +WK SEEEE+M
Sbjct: 343 PDTTSGQRNGFNLKRSYSNREAPKLTNLDAHRQPRQSTTDIRNN-LMSGNWKTSEEEEFM 401

Query: 711 WDDLNSGSTIHGASRKS--KRDPRLTDD 788
           W ++N G T HGA+  S    D  + DD
Sbjct: 402 WGEMNIGLTDHGANVSSNLSTDTWMADD 429


>ref|XP_003625749.1| Pre-mRNA cleavage complex 2 protein Pcf11 [Medicago truncatula]
           gi|355500764|gb|AES81967.1| Pre-mRNA cleavage complex 2
           protein Pcf11 [Medicago truncatula]
          Length = 1039

 Score =  221 bits (563), Expect = 2e-55
 Identities = 125/266 (46%), Positives = 161/266 (60%), Gaps = 4/266 (1%)
 Frame = +3

Query: 3   HPGMRHLFGTWKGVFPSQPLQIIEKELGFTPAANGSASGMTTSKTDSQSQRQAHSIHVNP 182
           H  MRHLFGTW+GVFP Q LQIIEKEL F PA NGSAS   T ++DSQSQR +HSIHVNP
Sbjct: 185 HSSMRHLFGTWRGVFPPQTLQIIEKELNFNPAVNGSASASATLRSDSQSQRPSHSIHVNP 244

Query: 183 KYLEARQRLQESSRAKGSTNDIIGNLVNSPEDTERLERSTNLNSGRQRADPRLKIYNIQR 362
           KYLE RQRLQ+SSR KG  +D+ G + N+ E  ER +R+  L + R   DPRL ++N Q 
Sbjct: 245 KYLE-RQRLQQSSRTKGVFDDMAGVISNANEGAERPDRA--LGAARPWLDPRLNMHNNQH 301

Query: 363 PPRDAVTECVQEK--GSAYGEYEYGTELSRHSASGIGKTSDRVTEQGIDKAWYGAGSITE 536
             R A+ + V EK  G AYG+ EY + +S    SG+G+T  R+            G + E
Sbjct: 302 THRGALNDSVPEKSIGGAYGDDEYNSSVSNSLGSGVGRTGSRL-----------IGGVAE 350

Query: 537 TISSQRNDFDIKLGLPHYSAHRSANNDAMSQPTHNLVTSRNSGEMDRSWKNSEEEEYMWD 716
           T+S QRN F +K    ++ A +S N DA     HN+     S  M ++WKNSEEEE+MWD
Sbjct: 351 TLSGQRNGFSLKHSFSNHEAPKSVNLDA-----HNI----RSSAMSKNWKNSEEEEFMWD 401

Query: 717 DLNSG--STIHGASRKSKRDPRLTDD 788
           ++N G    +   S     D  + DD
Sbjct: 402 EVNPGLSDNVPNVSNNLSSDQWMADD 427


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