BLASTX nr result

ID: Panax21_contig00008677 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008677
         (1555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280704.1| PREDICTED: chloroplastic group IIA intron sp...   411   0.0  
ref|XP_002516757.1| conserved hypothetical protein [Ricinus comm...   370   e-167
ref|XP_003551841.1| PREDICTED: chloroplastic group IIA intron sp...   358   e-158
ref|XP_004138635.1| PREDICTED: chloroplastic group IIA intron sp...   345   e-155
ref|XP_004158502.1| PREDICTED: LOW QUALITY PROTEIN: chloroplasti...   345   e-154

>ref|XP_002280704.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Vitis vinifera]
          Length = 1184

 Score =  411 bits (1057), Expect(2) = 0.0
 Identities = 207/298 (69%), Positives = 241/298 (80%)
 Frame = -3

Query: 899  RKLQGLAAAILKLWENCHIAKIAVKLGIPNTNNEEMANELKCLTGGVLLLRNKFFIIIYR 720
            RKLQGLAAAILKLWE   I KIA+K GIPNT NE+MANELKCLTGGVLLLRNKFFII+YR
Sbjct: 447  RKLQGLAAAILKLWEKSLIVKIAIKWGIPNTKNEQMANELKCLTGGVLLLRNKFFIILYR 506

Query: 719  GKDFLPCRVANLVAEREMELKRCELQEEAARLKAIGTICLTVEPSINTSTVGTLSEFRDI 540
            GKDFLPCRVANL+ EREME K C+++EE ARLKAI T  +T +P  NTST GTLSEF++I
Sbjct: 507  GKDFLPCRVANLIVEREMEFKGCQIREEDARLKAIETSFVTDKPLANTSTTGTLSEFQNI 566

Query: 539  QSVCGDLEGGNKDVKVXXXXXXXXXXXXXXXXEHKLFILKMKIERAVKELEKLNAAWGPA 360
            ++    L+ GN +++V                E  LFILK KIER+ K L KLN+AW PA
Sbjct: 567  ETEFRGLKDGNTEIEVELEAEKERLEKELKKQERNLFILKRKIERSAKVLAKLNSAWRPA 626

Query: 359  EPDKDQEIISPEERECFRKIGLKMDSSLVLGRRGVFDGVIEGLHQHWKHREIAKVITMQR 180
            + D D+E+I+ EERECFRKIG KMDSSL+LGRRGVFDGVIEGLHQHWKHREI KVITMQR
Sbjct: 627  DHDADKEMITEEERECFRKIGQKMDSSLLLGRRGVFDGVIEGLHQHWKHREIVKVITMQR 686

Query: 179  VFSRIVYTANLLQRESGGILISVDKLQEGHAIIFYRGKNYRRPLKLVPQNLLNKRRAL 6
             FS+++YTA LL+ ESGG+L+S+DKL+EGHAII YRGKNYRRP+KLVP+NLL KR AL
Sbjct: 687  SFSQVLYTAKLLESESGGVLVSIDKLKEGHAIIIYRGKNYRRPIKLVPKNLLTKREAL 744



 Score =  285 bits (729), Expect(2) = 0.0
 Identities = 141/228 (61%), Positives = 171/228 (75%), Gaps = 21/228 (9%)
 Frame = -1

Query: 1519 KMRKWVKVKKAGVTEAVVEQIRFIWKNNELVMLKFDIPLCRNMDRAREIVELKTGGLVVW 1340
            KMRKWVKVKKAGVTE+VV+QI  +WK++EL M+KFD+PLCRNMDRAREI+E+KT GLV+W
Sbjct: 216  KMRKWVKVKKAGVTESVVDQIHMVWKSDELAMVKFDMPLCRNMDRAREILEIKTRGLVIW 275

Query: 1339 CKKDALVIHRGSNYQSSPKAFLRRHTGLDGGHDTFSSDISYGNAGLQV--------KSTV 1184
             KKD LV++RGSNYQS+ K F +   GL  G D  +S ++  N    +        +ST 
Sbjct: 276  SKKDTLVVYRGSNYQSTSKHFQKMRPGLVAGADASNSKLNQSNFEDDLTISEIKFHESTT 335

Query: 1183 EEMIGRKDGEDETVS-------------IDGSLYEREADRLLSGLGPRYTDWWRPKPLPV 1043
             E +GRKDGE+++               ++GSLYEREADRLL GLGPR+ DWWRPKPLPV
Sbjct: 336  GEKMGRKDGEEDSSPTGIFMEEMVDSQPVNGSLYEREADRLLDGLGPRFIDWWRPKPLPV 395

Query: 1042 DADLLPEVVPGFKPPFRLCPPKARSKLEDDELTYLRNLAHPLPTHFVL 899
            DADLLPEV+PGF+PPFRL PP+ RSKL DDELTYLR LA+ LPTHFVL
Sbjct: 396  DADLLPEVLPGFRPPFRLSPPQTRSKLTDDELTYLRKLAYALPTHFVL 443


>ref|XP_002516757.1| conserved hypothetical protein [Ricinus communis]
            gi|223544130|gb|EEF45655.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 742

 Score =  370 bits (949), Expect(2) = e-167
 Identities = 190/298 (63%), Positives = 232/298 (77%)
 Frame = -3

Query: 899  RKLQGLAAAILKLWENCHIAKIAVKLGIPNTNNEEMANELKCLTGGVLLLRNKFFIIIYR 720
            R+LQGLAAAILKLWE   IAKIAVK GIPNT+NE+MANELK LTGGVLLLRNKFFII++R
Sbjct: 406  RRLQGLAAAILKLWERSLIAKIAVKWGIPNTDNEQMANELKHLTGGVLLLRNKFFIILFR 465

Query: 719  GKDFLPCRVANLVAEREMELKRCELQEEAARLKAIGTICLTVEPSINTSTVGTLSEFRDI 540
            GKDFLPC+VA+LV +RE ELK C+L EE ARLKAI T     E  +  + +GTL+EF+DI
Sbjct: 466  GKDFLPCQVADLVVKRENELKICQLNEEGARLKAIETSFTDDELVVKATKIGTLNEFQDI 525

Query: 539  QSVCGDLEGGNKDVKVXXXXXXXXXXXXXXXXEHKLFILKMKIERAVKELEKLNAAWGPA 360
            Q    +L  G +D K+                EHKL ILK KIE++ +EL KLN+AW PA
Sbjct: 526  QVRFKELAKGYRDSKLQLEAEKEKLERELRIQEHKLLILKSKIEKSARELSKLNSAWAPA 585

Query: 359  EPDKDQEIISPEERECFRKIGLKMDSSLVLGRRGVFDGVIEGLHQHWKHREIAKVITMQR 180
            + D D E+++ EEREC RKIGLKM SSL+LGRRGVFDGVIEGLHQHWKHRE+ KVI++QR
Sbjct: 586  DQDADLEMMTEEERECLRKIGLKMRSSLLLGRRGVFDGVIEGLHQHWKHREVVKVISLQR 645

Query: 179  VFSRIVYTANLLQRESGGILISVDKLQEGHAIIFYRGKNYRRPLKLVPQNLLNKRRAL 6
            +F++++ TA  L+ E+GGIL+S+DKL+EGHAII YRGKNYRRP +L+  NLL KR+AL
Sbjct: 646  MFAQVIRTAKFLEAETGGILVSIDKLKEGHAIIIYRGKNYRRPQRLL-NNLLTKRKAL 702



 Score =  247 bits (631), Expect(2) = e-167
 Identities = 133/220 (60%), Positives = 154/220 (70%), Gaps = 13/220 (5%)
 Frame = -1

Query: 1519 KMRKWVKVKKAGVTEAVVEQIRFIWKNNELVMLKFDIPLCRNMDRAREIVELKTGGLVVW 1340
            KMRKWVKV KAGVT++VV+QIR+ W+NNEL M+KFD+PLCRNMDRAREIVELKTGGLVVW
Sbjct: 212  KMRKWVKVMKAGVTQSVVDQIRYAWRNNELAMVKFDLPLCRNMDRAREIVELKTGGLVVW 271

Query: 1339 CKKDALVIHRGSNYQSSPKAFLRRHTGLDGGHDTFSSDISYGNAGLQVKSTVEEMIGRKD 1160
             +KD+LVI+RG NY                 H T SS +          ST++E IG KD
Sbjct: 272  TRKDSLVIYRGCNY-----------------HLTKSSHV----------STMDEKIGSKD 304

Query: 1159 GEDE-------------TVSIDGSLYEREADRLLSGLGPRYTDWWRPKPLPVDADLLPEV 1019
            GE+E             T +I+GSL+ERE DRLL GLGPR+ DWW  KPLPVDADLLPEV
Sbjct: 305  GEEEYIPTSIFIGDDANTPTINGSLFERETDRLLDGLGPRFVDWWMRKPLPVDADLLPEV 364

Query: 1018 VPGFKPPFRLCPPKARSKLEDDELTYLRNLAHPLPTHFVL 899
            V GF PP R     AR+KL+DDELTYLR LA+ LPTHFVL
Sbjct: 365  VAGFMPPSRF--HYARAKLKDDELTYLRKLAYALPTHFVL 402


>ref|XP_003551841.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Glycine max]
          Length = 712

 Score =  358 bits (918), Expect(2) = e-158
 Identities = 182/297 (61%), Positives = 225/297 (75%)
 Frame = -3

Query: 893  LQGLAAAILKLWENCHIAKIAVKLGIPNTNNEEMANELKCLTGGVLLLRNKFFIIIYRGK 714
            L+GLA+AILKLWE   IAKIA+K GIPNT+NE MANELKCLTGGVLLLRNKF+I++YRG 
Sbjct: 371  LKGLASAILKLWEKSLIAKIAIKYGIPNTDNEMMANELKCLTGGVLLLRNKFYILLYRGN 430

Query: 713  DFLPCRVANLVAEREMELKRCELQEEAARLKAIGTICLTVEPSINTSTVGTLSEFRDIQS 534
            DFLP  VA+LV +RE+ELK  +L EE AR+KAI       E  ++TST GTL+EFR IQ+
Sbjct: 431  DFLPRSVASLVEKRELELKSRQLHEEVARMKAIQAFSPIDEVPLDTSTSGTLTEFRKIQT 490

Query: 533  VCGDLEGGNKDVKVXXXXXXXXXXXXXXXXEHKLFILKMKIERAVKELEKLNAAWGPAEP 354
               D +  N D  +                + + FIL  KI+R+ +EL KLNAAW P+E 
Sbjct: 491  KLEDTKSVNVDSNIQLEAEICRLEKELKEEQRRAFILNKKIKRSERELSKLNAAWTPSEQ 550

Query: 353  DKDQEIISPEERECFRKIGLKMDSSLVLGRRGVFDGVIEGLHQHWKHREIAKVITMQRVF 174
            D D EI++ EERECFRKIGLKM SSL+LGRRG+FDGV+EGLHQHWKHRE+ KVITMQ++F
Sbjct: 551  DTDLEIMTDEERECFRKIGLKMQSSLLLGRRGIFDGVLEGLHQHWKHREVVKVITMQKLF 610

Query: 173  SRIVYTANLLQRESGGILISVDKLQEGHAIIFYRGKNYRRPLKLVPQNLLNKRRALQ 3
            S+++ TA +L+ ESGGIL+SVDKL+EGHAII YRGKNY+RP   + +NLL KR AL+
Sbjct: 611  SQVINTAKVLETESGGILVSVDKLKEGHAIIIYRGKNYKRPSIKLAKNLLTKREALR 667



 Score =  228 bits (581), Expect(2) = e-158
 Identities = 120/208 (57%), Positives = 140/208 (67%), Gaps = 1/208 (0%)
 Frame = -1

Query: 1519 KMRKWVKVKKAGVTEAVVEQIRFIWKNNELVMLKFDIPLCRNMDRAREIVELKTGGLVVW 1340
            +MR W+KVKKAGVT+ VV+QI+  W+ NEL M+KFDIPLCRNMDRAREIVE KTGGLVV 
Sbjct: 185  RMRTWIKVKKAGVTQDVVDQIKRTWRRNELAMIKFDIPLCRNMDRAREIVETKTGGLVVL 244

Query: 1339 CKKDALVIHRGSNYQSSPKAFLRRHTGLDGGH-DTFSSDISYGNAGLQVKSTVEEMIGRK 1163
             KKD LV++RG N+ SS           +  H D+ S+ I   N  L             
Sbjct: 245  SKKDFLVVYRGCNHHSSEML------NWNADHKDSISTGIQDVNCQL------------- 285

Query: 1162 DGEDETVSIDGSLYEREADRLLSGLGPRYTDWWRPKPLPVDADLLPEVVPGFKPPFRLCP 983
                    ++GSLYERE +RLL GLGPR+ DWW  KPLPVDADLLPE VPGF+PPFRLCP
Sbjct: 286  --------VNGSLYERETERLLDGLGPRFIDWWMHKPLPVDADLLPEEVPGFQPPFRLCP 337

Query: 982  PKARSKLEDDELTYLRNLAHPLPTHFVL 899
            P + +KL D ELTY R LA  LPTHFVL
Sbjct: 338  PHSSAKLTDYELTYFRKLAQSLPTHFVL 365


>ref|XP_004138635.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Cucumis sativus]
          Length = 760

 Score =  345 bits (886), Expect(2) = e-155
 Identities = 179/298 (60%), Positives = 218/298 (73%)
 Frame = -3

Query: 899  RKLQGLAAAILKLWENCHIAKIAVKLGIPNTNNEEMANELKCLTGGVLLLRNKFFIIIYR 720
            RKLQGLAA+ILKLWE   IAKIA+K G+PNT+NE+MA ELK LTGG LLLRNKF II+YR
Sbjct: 425  RKLQGLAASILKLWEKSMIAKIALKWGVPNTDNEQMALELKNLTGGTLLLRNKFVIILYR 484

Query: 719  GKDFLPCRVANLVAEREMELKRCELQEEAARLKAIGTICLTVEPSINTSTVGTLSEFRDI 540
            G DFLP  VA+ + +RE+EL+R +L EE +RLKA    C   E        GTLS+F+DI
Sbjct: 485  GNDFLPVGVADSIIQREVELQRWQLHEENSRLKASEFFCFDTENMEERGKAGTLSDFKDI 544

Query: 539  QSVCGDLEGGNKDVKVXXXXXXXXXXXXXXXXEHKLFILKMKIERAVKELEKLNAAWGPA 360
                 DL  G+ + ++                E +L IL  K+E++ KEL KLNA+W   
Sbjct: 545  TVGYEDLSTGSTESRLQAEAEKGKIIRGLRMQERRLKILNFKVEKSTKELTKLNASWRRV 604

Query: 359  EPDKDQEIISPEERECFRKIGLKMDSSLVLGRRGVFDGVIEGLHQHWKHREIAKVITMQR 180
            EPD DQE+I+ EER CFRK+GLKMDS L LGRRGVFDGVIEGLHQHWKHRE+ KVITMQR
Sbjct: 605  EPDADQELITNEERICFRKMGLKMDSCLTLGRRGVFDGVIEGLHQHWKHREVVKVITMQR 664

Query: 179  VFSRIVYTANLLQRESGGILISVDKLQEGHAIIFYRGKNYRRPLKLVPQNLLNKRRAL 6
             F+++ YTA LL+ ESGGIL+SVDKL+EG+AII +RGKNY+RPL  V +NLL KR+AL
Sbjct: 665  AFNQVNYTAKLLEAESGGILVSVDKLKEGYAIIIFRGKNYKRPLHSVSKNLLTKRKAL 722



 Score =  231 bits (590), Expect(2) = e-155
 Identities = 117/219 (53%), Positives = 143/219 (65%), Gaps = 12/219 (5%)
 Frame = -1

Query: 1519 KMRKWVKVKKAGVTEAVVEQIRFIWKNNELVMLKFDIPLCRNMDRAREIVELKTGGLVVW 1340
            KM KWVKV K GVT+ VV QI+F+W+ NEL MLKFD+PL RNMDRAREIVE+KTGG+VVW
Sbjct: 203  KMEKWVKVNKVGVTQDVVNQIQFMWERNELAMLKFDVPLSRNMDRAREIVEMKTGGMVVW 262

Query: 1339 CKKDALVIHRGSNYQSSPKAFLRRHTGLDGGHDTFSSDISYGNAGLQVKSTVEEMIGRKD 1160
             KK+ALV++RG NY  + K   ++   +   +       ++ +     +S +   I   D
Sbjct: 263  SKKNALVVYRGCNYPLNLKHSTKKQVHISPQNPVKVETDTHFSLSGHYESGLNRSINDND 322

Query: 1159 GEDETVS------------IDGSLYEREADRLLSGLGPRYTDWWRPKPLPVDADLLPEVV 1016
            GE E  S            + GSLYERE DRLL  LGPR+ DWW  KPLPVDAD+LPEVV
Sbjct: 323  GEWEEASSFFLIRHENLQPLSGSLYERETDRLLDDLGPRFIDWWMHKPLPVDADMLPEVV 382

Query: 1015 PGFKPPFRLCPPKARSKLEDDELTYLRNLAHPLPTHFVL 899
            PG+ PPFR CPP  +  L D  L +LR LAH LPTHFVL
Sbjct: 383  PGYMPPFRRCPPYTKQNLTDAGLQHLRKLAHSLPTHFVL 421


>ref|XP_004158502.1| PREDICTED: LOW QUALITY PROTEIN: chloroplastic group IIA intron
            splicing facilitator CRS1, chloroplastic-like [Cucumis
            sativus]
          Length = 760

 Score =  345 bits (886), Expect(2) = e-154
 Identities = 180/298 (60%), Positives = 219/298 (73%)
 Frame = -3

Query: 899  RKLQGLAAAILKLWENCHIAKIAVKLGIPNTNNEEMANELKCLTGGVLLLRNKFFIIIYR 720
            RKLQGLAA+ILKLWE   IAKIA+K G+PNT+NE+MA ELK LTGG LLLRNKF II+YR
Sbjct: 425  RKLQGLAASILKLWEKSMIAKIALKWGVPNTDNEQMALELKNLTGGTLLLRNKFVIILYR 484

Query: 719  GKDFLPCRVANLVAEREMELKRCELQEEAARLKAIGTICLTVEPSINTSTVGTLSEFRDI 540
            G DFLP  VA+ + +RE+EL+R +L EE +RLKA    C   E        GTLS+F+DI
Sbjct: 485  GNDFLPVGVADSIIQREVELQRWQLHEENSRLKASEFFCFDTENMEERGKAGTLSDFKDI 544

Query: 539  QSVCGDLEGGNKDVKVXXXXXXXXXXXXXXXXEHKLFILKMKIERAVKELEKLNAAWGPA 360
                 DL  G+ + ++                E +L IL  K+E++ KEL KLNA+W   
Sbjct: 545  TVGYEDLSTGSTESRLQAEAEKXKIIRGLRMQERRLKILNFKVEKSTKELTKLNASWRRV 604

Query: 359  EPDKDQEIISPEERECFRKIGLKMDSSLVLGRRGVFDGVIEGLHQHWKHREIAKVITMQR 180
            EPD DQE+I+ EER CFRK+GLKMDS L LGRRGVFDGVIEGLHQHWKHRE+ KVITMQR
Sbjct: 605  EPDADQELITNEERICFRKMGLKMDSCLTLGRRGVFDGVIEGLHQHWKHREVVKVITMQR 664

Query: 179  VFSRIVYTANLLQRESGGILISVDKLQEGHAIIFYRGKNYRRPLKLVPQNLLNKRRAL 6
             F+++ YTA LL+ ESGGIL+SVDKL+EG+AII +RGKNY+RPL  V +NLL KR+AL
Sbjct: 665  AFNQVNYTAKLLEAESGGILVSVDKLKEGYAIIIFRGKNYKRPLHSVSKNLLTKRKAL 722



 Score =  229 bits (583), Expect(2) = e-154
 Identities = 117/219 (53%), Positives = 142/219 (64%), Gaps = 12/219 (5%)
 Frame = -1

Query: 1519 KMRKWVKVKKAGVTEAVVEQIRFIWKNNELVMLKFDIPLCRNMDRAREIVELKTGGLVVW 1340
            KM KWVKV K GVT+ VV QI+F+W+ NEL MLKFD+PL RNMDRAREIVE+KTGG+VVW
Sbjct: 203  KMEKWVKVNKVGVTQDVVNQIQFMWERNELAMLKFDVPLSRNMDRAREIVEMKTGGMVVW 262

Query: 1339 CKKDALVIHRGSNYQSSPKAFLRRHTGLDGGHDTFSSDISYGNAGLQVKSTVEEMIGRKD 1160
             KK+ALVI+RG NY  + K   ++   +   +       ++ +     +S +   I   D
Sbjct: 263  SKKNALVIYRGCNYPLNLKHSTKKQVHISPQNPVKVETDTHFSLSGHYESGLNRSINDND 322

Query: 1159 GEDETVS------------IDGSLYEREADRLLSGLGPRYTDWWRPKPLPVDADLLPEVV 1016
            GE E  S            + GSLYERE DRLL  LGPR+ DWW  KPLPVDAD+L EVV
Sbjct: 323  GEWEEASSFFLIRHENLQPLSGSLYERETDRLLDDLGPRFIDWWMHKPLPVDADMLQEVV 382

Query: 1015 PGFKPPFRLCPPKARSKLEDDELTYLRNLAHPLPTHFVL 899
            PG+ PPFR CPP  +  L D  L +LR LAH LPTHFVL
Sbjct: 383  PGYMPPFRRCPPYTKQNLTDAGLQHLRKLAHSLPTHFVL 421


Top