BLASTX nr result

ID: Panax21_contig00008673 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008673
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299663.1| predicted protein [Populus trichocarpa] gi|2...   222   3e-56
ref|XP_003540777.1| PREDICTED: vacuolar protein sorting-associat...   219   1e-55
ref|XP_002273250.2| PREDICTED: vacuolar protein sorting-associat...   218   3e-55
emb|CBI17115.3| unnamed protein product [Vitis vinifera]              218   3e-55
ref|XP_002523748.1| vacuolar protein sorting vps41, putative [Ri...   218   3e-55

>ref|XP_002299663.1| predicted protein [Populus trichocarpa] gi|222846921|gb|EEE84468.1|
            predicted protein [Populus trichocarpa]
          Length = 951

 Score =  222 bits (565), Expect = 3e-56
 Identities = 106/112 (94%), Positives = 111/112 (99%)
 Frame = -3

Query: 423  ALAVIINKLGDIEEAIEFVSMQHDDELWEELIKQCLHKPEMVGVLLEHTVGNLDPLYIVN 244
            ALA+IINKLGDIEEA+EFV+MQHDDELWEELIKQCLHKPEMVGVLLEHTVGNLDPLYIVN
Sbjct: 719  ALAIIINKLGDIEEAVEFVTMQHDDELWEELIKQCLHKPEMVGVLLEHTVGNLDPLYIVN 778

Query: 243  MVPNGLEIPRLRDRLVKIITDYRTETSLRHGCNDILKADCINLLIK*YKEAR 88
            MVPNGLEIPRLRDRLVKIITDYRTETSLRHGCNDILKADC+NLL+K YKEAR
Sbjct: 779  MVPNGLEIPRLRDRLVKIITDYRTETSLRHGCNDILKADCVNLLVKYYKEAR 830


>ref|XP_003540777.1| PREDICTED: vacuolar protein sorting-associated protein 41 homolog
            [Glycine max]
          Length = 957

 Score =  219 bits (559), Expect = 1e-55
 Identities = 105/113 (92%), Positives = 111/113 (98%)
 Frame = -3

Query: 423  ALAVIINKLGDIEEAIEFVSMQHDDELWEELIKQCLHKPEMVGVLLEHTVGNLDPLYIVN 244
            ALAVIINKLGDIEEA+EFV+MQHDDELWEELIKQCLHKPEMVG+LLEHTVGNLDPLYIVN
Sbjct: 717  ALAVIINKLGDIEEAVEFVTMQHDDELWEELIKQCLHKPEMVGILLEHTVGNLDPLYIVN 776

Query: 243  MVPNGLEIPRLRDRLVKIITDYRTETSLRHGCNDILKADCINLLIK*YKEARN 85
             VPNGLEIPRLRDRLVKIITDYRTETSLRHGCNDI+KADC+NLLIK YKEAR+
Sbjct: 777  KVPNGLEIPRLRDRLVKIITDYRTETSLRHGCNDIIKADCVNLLIKYYKEARH 829


>ref|XP_002273250.2| PREDICTED: vacuolar protein sorting-associated protein 41 homolog
            [Vitis vinifera]
          Length = 960

 Score =  218 bits (556), Expect = 3e-55
 Identities = 105/113 (92%), Positives = 112/113 (99%)
 Frame = -3

Query: 423  ALAVIINKLGDIEEAIEFVSMQHDDELWEELIKQCLHKPEMVGVLLEHTVGNLDPLYIVN 244
            ALAVIIN+LGDIEEA+EFV+MQHDDELWEELIKQCL+KPEMVGVLLEHTVGNLDPLYIVN
Sbjct: 721  ALAVIINQLGDIEEAVEFVNMQHDDELWEELIKQCLNKPEMVGVLLEHTVGNLDPLYIVN 780

Query: 243  MVPNGLEIPRLRDRLVKIITDYRTETSLRHGCNDILKADCINLLIK*YKEARN 85
            MVPNGLEIPRLRDRLVKIITDYRTETSLRHGCNDILKADC+NLL+K YKEAR+
Sbjct: 781  MVPNGLEIPRLRDRLVKIITDYRTETSLRHGCNDILKADCVNLLVKYYKEARH 833


>emb|CBI17115.3| unnamed protein product [Vitis vinifera]
          Length = 908

 Score =  218 bits (556), Expect = 3e-55
 Identities = 105/113 (92%), Positives = 112/113 (99%)
 Frame = -3

Query: 423  ALAVIINKLGDIEEAIEFVSMQHDDELWEELIKQCLHKPEMVGVLLEHTVGNLDPLYIVN 244
            ALAVIIN+LGDIEEA+EFV+MQHDDELWEELIKQCL+KPEMVGVLLEHTVGNLDPLYIVN
Sbjct: 669  ALAVIINQLGDIEEAVEFVNMQHDDELWEELIKQCLNKPEMVGVLLEHTVGNLDPLYIVN 728

Query: 243  MVPNGLEIPRLRDRLVKIITDYRTETSLRHGCNDILKADCINLLIK*YKEARN 85
            MVPNGLEIPRLRDRLVKIITDYRTETSLRHGCNDILKADC+NLL+K YKEAR+
Sbjct: 729  MVPNGLEIPRLRDRLVKIITDYRTETSLRHGCNDILKADCVNLLVKYYKEARH 781


>ref|XP_002523748.1| vacuolar protein sorting vps41, putative [Ricinus communis]
            gi|223537052|gb|EEF38688.1| vacuolar protein sorting
            vps41, putative [Ricinus communis]
          Length = 955

 Score =  218 bits (556), Expect = 3e-55
 Identities = 105/112 (93%), Positives = 111/112 (99%)
 Frame = -3

Query: 423  ALAVIINKLGDIEEAIEFVSMQHDDELWEELIKQCLHKPEMVGVLLEHTVGNLDPLYIVN 244
            ALAVIINKLGDIEEA+EFV+MQHDDELWEELI+QCL+KPEMVGVLLEHTVGNLDPLYIVN
Sbjct: 718  ALAVIINKLGDIEEAVEFVTMQHDDELWEELIRQCLNKPEMVGVLLEHTVGNLDPLYIVN 777

Query: 243  MVPNGLEIPRLRDRLVKIITDYRTETSLRHGCNDILKADCINLLIK*YKEAR 88
            MVPNGLEIPRLRDRLVKIITDYRTETSLRHGCNDILKADC+NLL+K YKEAR
Sbjct: 778  MVPNGLEIPRLRDRLVKIITDYRTETSLRHGCNDILKADCVNLLVKYYKEAR 829


Top