BLASTX nr result

ID: Panax21_contig00008657 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008657
         (1110 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280803.2| PREDICTED: pentatricopeptide repeat-containi...   147   6e-33
emb|CBI28050.3| unnamed protein product [Vitis vinifera]              140   4e-31
ref|XP_002514281.1| multidrug resistance pump, putative [Ricinus...   125   2e-26
ref|XP_003532483.1| PREDICTED: pentatricopeptide repeat-containi...   111   4e-22
ref|XP_003524395.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   107   4e-21

>ref|XP_002280803.2| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Vitis vinifera]
          Length = 816

 Score =  147 bits (370), Expect = 6e-33
 Identities = 82/187 (43%), Positives = 118/187 (63%)
 Frame = -2

Query: 566 GSGVASFRTSDKRVDIETVKNGXXXXXXXXXXXXXXKDRYVRNMIGSESKREMGLGLNSI 387
           GSG +S+ +  +RV  ++VK                ++RY +  + S           S+
Sbjct: 10  GSGFSSYGSKGERVGRKSVKTHVGWAVEEKNEKRFTRERYSKKRLDSRRNGGTSSKFPSL 69

Query: 386 KSEDENFLNVLSKSRANKVMGENMDKISKKGGSDKLGVEKRGKGSKKNIVDSPELVLKIG 207
           KSE +N +N   K+       E  ++ SKKG +DK+  E+  KGSKKN VDS E +L++G
Sbjct: 70  KSESKNLVNKSLKAN------EKEEEKSKKGDADKVR-EEMEKGSKKNKVDSQEGLLRVG 122

Query: 206 LDMCSKRGDVIGAIQLFDLAQREGIKMGQYHYAVILYLCSSATTGVVQPAKSGSGSRSLS 27
           L+MCSK GDV+GA++L+D A REGI++GQYHY V+LYLCSSA  GV++PAKSG+GSRSL 
Sbjct: 123 LEMCSKNGDVMGALELYDSALREGIELGQYHYTVLLYLCSSAALGVIRPAKSGTGSRSLD 182

Query: 26  LVDYSTE 6
           ++  S+E
Sbjct: 183 MLSPSSE 189


>emb|CBI28050.3| unnamed protein product [Vitis vinifera]
          Length = 751

 Score =  140 bits (354), Expect = 4e-31
 Identities = 78/181 (43%), Positives = 113/181 (62%)
 Frame = -2

Query: 566 GSGVASFRTSDKRVDIETVKNGXXXXXXXXXXXXXXKDRYVRNMIGSESKREMGLGLNSI 387
           GSG +S+ +  +RV  ++VK                ++RY +  + S           S+
Sbjct: 10  GSGFSSYGSKGERVGRKSVKTHVGWAVEEKNEKRFTRERYSKKRLDSRRNGGTSSKFPSL 69

Query: 386 KSEDENFLNVLSKSRANKVMGENMDKISKKGGSDKLGVEKRGKGSKKNIVDSPELVLKIG 207
           KSE +N +N   K+       E  ++ SKKG +DK+  E+  KGSKKN VDS E +L++G
Sbjct: 70  KSESKNLVNKSLKAN------EKEEEKSKKGDADKVR-EEMEKGSKKNKVDSQEGLLRVG 122

Query: 206 LDMCSKRGDVIGAIQLFDLAQREGIKMGQYHYAVILYLCSSATTGVVQPAKSGSGSRSLS 27
           L+MCSK GDV+GA++L+D A REGI++GQYHY V+LYLCSSA  GV++PAKSG+GSR+  
Sbjct: 123 LEMCSKNGDVMGALELYDSALREGIELGQYHYTVLLYLCSSAALGVIRPAKSGTGSRTFE 182

Query: 26  L 24
           +
Sbjct: 183 V 183


>ref|XP_002514281.1| multidrug resistance pump, putative [Ricinus communis]
           gi|223546737|gb|EEF48235.1| multidrug resistance pump,
           putative [Ricinus communis]
          Length = 745

 Score =  125 bits (313), Expect = 2e-26
 Identities = 62/111 (55%), Positives = 79/111 (71%)
 Frame = -2

Query: 338 NKVMGENMDKISKKGGSDKLGVEKRGKGSKKNIVDSPELVLKIGLDMCSKRGDVIGAIQL 159
           N+++   M+K  +KG  +K+  EK GK SK+N  D  E+  ++ LD C KRGDV+ AIQL
Sbjct: 17  NQLISGRMEKKPRKGSDNKVKEEKSGKWSKRNKGDPQEVKFRLELDKCCKRGDVMAAIQL 76

Query: 158 FDLAQREGIKMGQYHYAVILYLCSSATTGVVQPAKSGSGSRSLSLVDYSTE 6
           +DLAQREGIKMGQYHY V+LYLCSSA  GVVQP KSG G R+ + +  S E
Sbjct: 77  YDLAQREGIKMGQYHYTVLLYLCSSAAAGVVQPGKSGRGGRASNSLAVSDE 127


>ref|XP_003532483.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Glycine max]
          Length = 724

 Score =  111 bits (277), Expect = 4e-22
 Identities = 62/122 (50%), Positives = 81/122 (66%), Gaps = 2/122 (1%)
 Frame = -2

Query: 365 LNVLSKSRANKVMGENMDKISKKGGSDKLG--VEKRGKGSKKNIVDSPELVLKIGLDMCS 192
           L +++K RA     E    IS    S ++   V+K+ K  K    D PE+ LK  LDMCS
Sbjct: 59  LEIVTK-RAPPASFEPKAGISSTSSSSEVSERVKKKKKKKKNKDKDCPEVKLKNALDMCS 117

Query: 191 KRGDVIGAIQLFDLAQREGIKMGQYHYAVILYLCSSATTGVVQPAKSGSGSRSLSLVDYS 12
           KRGDV+GA+ L+D A  EG+K+GQ+HY V+LYLCSSA  GVV+PAKSGSG+R+L+   YS
Sbjct: 118 KRGDVMGALSLYDSAISEGVKLGQHHYTVLLYLCSSAAVGVVRPAKSGSGARTLNSHVYS 177

Query: 11  TE 6
            E
Sbjct: 178 NE 179


>ref|XP_003524395.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g32230, mitochondrial-like [Glycine max]
          Length = 540

 Score =  107 bits (268), Expect = 4e-21
 Identities = 54/91 (59%), Positives = 71/91 (78%), Gaps = 1/91 (1%)
 Frame = -2

Query: 275 VEKRGKG-SKKNIVDSPELVLKIGLDMCSKRGDVIGAIQLFDLAQREGIKMGQYHYAVIL 99
           VE+ G+   KK   DSPE+ LK GLDMCSKRGDV+GA+ L+D A  EG+K+GQ+HY ++L
Sbjct: 8   VEEDGERVKKKKDKDSPEVKLKNGLDMCSKRGDVMGALSLYDSAISEGVKLGQHHYTLLL 67

Query: 98  YLCSSATTGVVQPAKSGSGSRSLSLVDYSTE 6
           +LCSSA  GVV+PAKSGSG+R+L+ +  S E
Sbjct: 68  FLCSSAAVGVVRPAKSGSGARTLNALVSSNE 98


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