BLASTX nr result

ID: Panax21_contig00008635 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008635
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA63968.1| pom30 [Solanum tuberosum]                             101   1e-40
gb|ABB16970.1| POM30-like protein [Solanum tuberosum]                 101   1e-40
ref|XP_002306507.1| porin/voltage-dependent anion-selective chan...    98   1e-38
ref|XP_002279650.2| PREDICTED: mitochondrial outer membrane prot...    99   3e-38
ref|NP_001241153.1| uncharacterized protein LOC100818855 [Glycin...    95   1e-36

>emb|CAA63968.1| pom30 [Solanum tuberosum]
          Length = 276

 Score =  101 bits (252), Expect(2) = 1e-40
 Identities = 48/56 (85%), Positives = 53/56 (94%)
 Frame = +3

Query: 3   ETSSGKLTKYTAGISVTKPDSCASIVLGDKGDTIKASYVHHLDLLKKSAAVGEISR 170
           ET+ GKL KYTAGISVTKPDSCA+I+LGDKGDTIKASY+HHLD LKKSAAVGEI+R
Sbjct: 149 ETAEGKLAKYTAGISVTKPDSCAAIILGDKGDTIKASYIHHLDELKKSAAVGEITR 204



 Score = 90.1 bits (222), Expect(2) = 1e-40
 Identities = 42/50 (84%), Positives = 46/50 (92%)
 Frame = +1

Query: 253 RFSTNENTFTVGGLYTVDNLTVVKAKLNNHGKLGALLQHEIIPKSLVTIA 402
           RFSTNENTFTVGG Y VDNLT+VK KLNNHG LGALLQHE+IPKSL+TI+
Sbjct: 205 RFSTNENTFTVGGSYAVDNLTIVKLKLNNHGNLGALLQHELIPKSLLTIS 254


>gb|ABB16970.1| POM30-like protein [Solanum tuberosum]
          Length = 275

 Score =  101 bits (252), Expect(2) = 1e-40
 Identities = 48/56 (85%), Positives = 53/56 (94%)
 Frame = +3

Query: 3   ETSSGKLTKYTAGISVTKPDSCASIVLGDKGDTIKASYVHHLDLLKKSAAVGEISR 170
           ET+ GKL KYTAGISVTKPDSCA+I+LGDKGDTIKASY+HHLD LKKSAAVGEI+R
Sbjct: 148 ETAEGKLAKYTAGISVTKPDSCAAIILGDKGDTIKASYIHHLDELKKSAAVGEITR 203



 Score = 90.1 bits (222), Expect(2) = 1e-40
 Identities = 42/50 (84%), Positives = 46/50 (92%)
 Frame = +1

Query: 253 RFSTNENTFTVGGLYTVDNLTVVKAKLNNHGKLGALLQHEIIPKSLVTIA 402
           RFSTNENTFTVGG Y VDNLT+VK KLNNHG LGALLQHE+IPKSL+TI+
Sbjct: 204 RFSTNENTFTVGGSYAVDNLTIVKLKLNNHGNLGALLQHELIPKSLLTIS 253


>ref|XP_002306507.1| porin/voltage-dependent anion-selective channel protein [Populus
           trichocarpa] gi|222855956|gb|EEE93503.1|
           porin/voltage-dependent anion-selective channel protein
           [Populus trichocarpa]
          Length = 276

 Score = 97.8 bits (242), Expect(2) = 1e-38
 Identities = 47/56 (83%), Positives = 53/56 (94%)
 Frame = +3

Query: 3   ETSSGKLTKYTAGISVTKPDSCASIVLGDKGDTIKASYVHHLDLLKKSAAVGEISR 170
           +T+SG  TKYTAGISVTKPDS ASI+LGDKGD+I+ASYVHHLDLLKKSAAVGEI+R
Sbjct: 149 DTTSGSFTKYTAGISVTKPDSYASIILGDKGDSIRASYVHHLDLLKKSAAVGEITR 204



 Score = 87.4 bits (215), Expect(2) = 1e-38
 Identities = 40/50 (80%), Positives = 48/50 (96%)
 Frame = +1

Query: 253 RFSTNENTFTVGGLYTVDNLTVVKAKLNNHGKLGALLQHEIIPKSLVTIA 402
           RFS+NENTFTVGG + VD+LTVVKAKLNNHGKLGAL+QHE+IPKS++TI+
Sbjct: 205 RFSSNENTFTVGGSFAVDHLTVVKAKLNNHGKLGALVQHEVIPKSVLTIS 254


>ref|XP_002279650.2| PREDICTED: mitochondrial outer membrane protein porin of 36
           kDa-like [Vitis vinifera] gi|147772866|emb|CAN75907.1|
           hypothetical protein VITISV_001975 [Vitis vinifera]
           gi|296087320|emb|CBI33694.3| unnamed protein product
           [Vitis vinifera]
          Length = 276

 Score = 99.4 bits (246), Expect(2) = 3e-38
 Identities = 48/56 (85%), Positives = 52/56 (92%)
 Frame = +3

Query: 3   ETSSGKLTKYTAGISVTKPDSCASIVLGDKGDTIKASYVHHLDLLKKSAAVGEISR 170
           +T+SG  TKYTAGISV KPDSCASI+LGDKGDTI+ASYVHHLD LKKSAAVGEISR
Sbjct: 149 DTTSGCFTKYTAGISVAKPDSCASIILGDKGDTIRASYVHHLDSLKKSAAVGEISR 204



 Score = 84.3 bits (207), Expect(2) = 3e-38
 Identities = 39/50 (78%), Positives = 45/50 (90%)
 Frame = +1

Query: 253 RFSTNENTFTVGGLYTVDNLTVVKAKLNNHGKLGALLQHEIIPKSLVTIA 402
           RFSTN+NTFTVGG Y +D LT VKAKLNNHG LGALLQHEIIPKS++T++
Sbjct: 205 RFSTNDNTFTVGGSYAIDPLTNVKAKLNNHGNLGALLQHEIIPKSILTLS 254


>ref|NP_001241153.1| uncharacterized protein LOC100818855 [Glycine max]
           gi|255636995|gb|ACU18830.1| unknown [Glycine max]
          Length = 276

 Score = 94.7 bits (234), Expect(2) = 1e-36
 Identities = 45/56 (80%), Positives = 52/56 (92%)
 Frame = +3

Query: 3   ETSSGKLTKYTAGISVTKPDSCASIVLGDKGDTIKASYVHHLDLLKKSAAVGEISR 170
           +TSSG  TKYTAGISVT+PDS AS++LGDKGD+IKASY+HHLDLLKKSAAV EI+R
Sbjct: 149 DTSSGGFTKYTAGISVTRPDSSASVILGDKGDSIKASYLHHLDLLKKSAAVAEITR 204



 Score = 83.6 bits (205), Expect(2) = 1e-36
 Identities = 39/50 (78%), Positives = 45/50 (90%)
 Frame = +1

Query: 253 RFSTNENTFTVGGLYTVDNLTVVKAKLNNHGKLGALLQHEIIPKSLVTIA 402
           +FSTNENTFTVGG + VD LT VKA+LNNHGKLGALLQHEIIPKS+ T++
Sbjct: 205 KFSTNENTFTVGGSFAVDPLTQVKARLNNHGKLGALLQHEIIPKSVFTVS 254


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