BLASTX nr result

ID: Panax21_contig00008632 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008632
         (1355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531931.1| NADH-ubiquinone oxidoreductase, putative [Ri...   712   0.0  
ref|XP_002305231.1| predicted protein [Populus trichocarpa] gi|2...   707   0.0  
sp|Q43644.1|NDUS1_SOLTU RecName: Full=NADH dehydrogenase [ubiqui...   705   0.0  
ref|XP_002302917.1| predicted protein [Populus trichocarpa] gi|2...   704   0.0  
ref|XP_002270157.1| PREDICTED: NADH dehydrogenase [ubiquinone] i...   704   0.0  

>ref|XP_002531931.1| NADH-ubiquinone oxidoreductase, putative [Ricinus communis]
            gi|223528410|gb|EEF30445.1| NADH-ubiquinone
            oxidoreductase, putative [Ricinus communis]
          Length = 744

 Score =  712 bits (1837), Expect = 0.0
 Identities = 345/356 (96%), Positives = 353/356 (99%)
 Frame = +2

Query: 287  HYPNPDDVIEVFVDGYPVKIPKGMTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVE 466
            H+PNP+D IEVFVDGYPVKIPKGMTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVE
Sbjct: 65   HFPNPEDAIEVFVDGYPVKIPKGMTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVE 124

Query: 467  KSPKPVASCAMPALPGMKIKTDTPIAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQS 646
            KSPKPVASCAMPALPGMKIKTDTP+AKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQS
Sbjct: 125  KSPKPVASCAMPALPGMKIKTDTPLAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQS 184

Query: 647  MAFGSDRGRFTEVKRSVVDKNLGPLVKTVMTRCIQCTRCVRFATEVAGVQDLGMLGRGSG 826
            MAFGSDRGRFTE+KRSVVDKNLGPLVKTVMTRCIQCTRCVRFATEVAGVQDLGMLGRGSG
Sbjct: 185  MAFGSDRGRFTEMKRSVVDKNLGPLVKTVMTRCIQCTRCVRFATEVAGVQDLGMLGRGSG 244

Query: 827  EEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKARNWELKGTESIDVTDAVGSNIRI 1006
            EEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKARNWELKGTESIDVTDAVGSNIRI
Sbjct: 245  EEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKARNWELKGTESIDVTDAVGSNIRI 304

Query: 1007 DSRGPEVMRILPRLNEDINEEWISDKTRFCYDGLKRQRLNDPMIRGADGRFKAVSWRDAL 1186
            DSRGPEVMRI+PRLNEDINEEWISDKTRFCYDGLKRQRLNDPMIRGADGRFKAVSWRDAL
Sbjct: 305  DSRGPEVMRIVPRLNEDINEEWISDKTRFCYDGLKRQRLNDPMIRGADGRFKAVSWRDAL 364

Query: 1187 AVVAEVIHQVKPEEIVGVAGKLSDAESMIALKDFLNKMGSNNVWCEGNGVHPNADL 1354
            AVVAEV+HQVKPEEIVGVAGKLSDAESM+ALKDFLNKMGS+NVWCEGNG  PNADL
Sbjct: 365  AVVAEVMHQVKPEEIVGVAGKLSDAESMMALKDFLNKMGSDNVWCEGNGPSPNADL 420


>ref|XP_002305231.1| predicted protein [Populus trichocarpa] gi|222848195|gb|EEE85742.1|
            predicted protein [Populus trichocarpa]
          Length = 736

 Score =  707 bits (1826), Expect = 0.0
 Identities = 346/397 (87%), Positives = 361/397 (90%)
 Frame = +2

Query: 164  KNAFLRAIVSTPELNNXXXXXXXXXXXXXXXXXXXXXXXXXHYPNPDDVIEVFVDGYPVK 343
            +N  LR+IV+ PEL +                         H+PNPDD IEVFVDGYPVK
Sbjct: 19   RNLLLRSIVTKPELQSAEPATTPQPDLPPRTPLGGARV---HFPNPDDAIEVFVDGYPVK 75

Query: 344  IPKGMTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASCAMPALPGMKI 523
            IPKGMTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASCAMPALPGMKI
Sbjct: 76   IPKGMTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASCAMPALPGMKI 135

Query: 524  KTDTPIAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEVKRSVVD 703
            KTDTP+AKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEVKRSVVD
Sbjct: 136  KTDTPVAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEVKRSVVD 195

Query: 704  KNLGPLVKTVMTRCIQCTRCVRFATEVAGVQDLGMLGRGSGEEIGTYVEKLMTSELSGNV 883
            KNLGPLVKTVMTRCIQCTRCVRFA+E+AGVQDLGMLGRGSGEEIGTYVEKLMTSELSGNV
Sbjct: 196  KNLGPLVKTVMTRCIQCTRCVRFASEIAGVQDLGMLGRGSGEEIGTYVEKLMTSELSGNV 255

Query: 884  IDICPVGALTSKPFAFKARNWELKGTESIDVTDAVGSNIRIDSRGPEVMRILPRLNEDIN 1063
            IDICPVGALTSKPFAFKARNWELKGTE+ID+TDAVGSNIRIDSRGPEV+RI PRLNEDIN
Sbjct: 256  IDICPVGALTSKPFAFKARNWELKGTETIDITDAVGSNIRIDSRGPEVLRITPRLNEDIN 315

Query: 1064 EEWISDKTRFCYDGLKRQRLNDPMIRGADGRFKAVSWRDALAVVAEVIHQVKPEEIVGVA 1243
            EEWISDKTRFCYDGLKRQRLNDPMIRGADGRFKAVSW D LAVVAE+ HQVKPEE+VG+A
Sbjct: 316  EEWISDKTRFCYDGLKRQRLNDPMIRGADGRFKAVSWHDVLAVVAEIAHQVKPEEMVGIA 375

Query: 1244 GKLSDAESMIALKDFLNKMGSNNVWCEGNGVHPNADL 1354
            GKLSDAESM+ALKDFLNKMGSNNVWCEGNG  PNADL
Sbjct: 376  GKLSDAESMMALKDFLNKMGSNNVWCEGNGPSPNADL 412


>sp|Q43644.1|NDUS1_SOLTU RecName: Full=NADH dehydrogenase [ubiquinone] iron-sulfur protein 1,
            mitochondrial; AltName: Full=76 kDa mitochondrial complex
            I subunit; AltName: Full=Complex I-76kD; Short=CI-76kD;
            AltName: Full=NADH-ubiquinone oxidoreductase 76 kDa
            subunit; Flags: Precursor gi|758340|emb|CAA59818.1| 76
            kDa mitochondrial complex I subunit [Solanum tuberosum]
          Length = 738

 Score =  705 bits (1819), Expect = 0.0
 Identities = 347/394 (88%), Positives = 362/394 (91%), Gaps = 2/394 (0%)
 Frame = +2

Query: 179  RAIVSTPELNNXXXXXXXXXXXXXXXXXXXXXXXXX--HYPNPDDVIEVFVDGYPVKIPK 352
            R IVSTPEL N                           H PNP+DVIEVFVDGYPVKIPK
Sbjct: 22   RTIVSTPELKNADAAAAAAAADAPSDLPKRHPVGGARVHLPNPEDVIEVFVDGYPVKIPK 81

Query: 353  GMTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASCAMPALPGMKIKTD 532
            GMTVLQACE+AGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASCAMPALPGMKIKTD
Sbjct: 82   GMTVLQACEIAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASCAMPALPGMKIKTD 141

Query: 533  TPIAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEVKRSVVDKNL 712
            TPIAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTE+KRSVVDKNL
Sbjct: 142  TPIAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRSVVDKNL 201

Query: 713  GPLVKTVMTRCIQCTRCVRFATEVAGVQDLGMLGRGSGEEIGTYVEKLMTSELSGNVIDI 892
            GPLVKTVMTRCIQCTRCVRFA+EVAGV+DLGMLGRGSGEEIGTYVEKLMTSELSGNVIDI
Sbjct: 202  GPLVKTVMTRCIQCTRCVRFASEVAGVEDLGMLGRGSGEEIGTYVEKLMTSELSGNVIDI 261

Query: 893  CPVGALTSKPFAFKARNWELKGTESIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEW 1072
            CPVGALTSKPFAFKARNWELKGTESIDVTDAVGSNIRIDSRGPEVMR++PRLNEDINEEW
Sbjct: 262  CPVGALTSKPFAFKARNWELKGTESIDVTDAVGSNIRIDSRGPEVMRVVPRLNEDINEEW 321

Query: 1073 ISDKTRFCYDGLKRQRLNDPMIRGADGRFKAVSWRDALAVVAEVIHQVKPEEIVGVAGKL 1252
            ISDKTRF YDGLKRQRLNDPMIRGADGRF+AVSWRDALA+VAEV+HQ+KPEEIVGVAGKL
Sbjct: 322  ISDKTRFFYDGLKRQRLNDPMIRGADGRFQAVSWRDALAIVAEVMHQIKPEEIVGVAGKL 381

Query: 1253 SDAESMIALKDFLNKMGSNNVWCEGNGVHPNADL 1354
            SDAESM+ALKD LNKMGSNN++CEGNG+HPNADL
Sbjct: 382  SDAESMMALKDLLNKMGSNNIFCEGNGMHPNADL 415


>ref|XP_002302917.1| predicted protein [Populus trichocarpa] gi|222844643|gb|EEE82190.1|
            predicted protein [Populus trichocarpa]
          Length = 739

 Score =  704 bits (1817), Expect = 0.0
 Identities = 339/356 (95%), Positives = 348/356 (97%)
 Frame = +2

Query: 287  HYPNPDDVIEVFVDGYPVKIPKGMTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVE 466
            H+PNP+D IEVFVDGYPVKIPKGMTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVE
Sbjct: 60   HFPNPEDAIEVFVDGYPVKIPKGMTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVE 119

Query: 467  KSPKPVASCAMPALPGMKIKTDTPIAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQS 646
            KSPKPVASCAMPALPGMKIKTDTP+AKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQS
Sbjct: 120  KSPKPVASCAMPALPGMKIKTDTPVAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQS 179

Query: 647  MAFGSDRGRFTEVKRSVVDKNLGPLVKTVMTRCIQCTRCVRFATEVAGVQDLGMLGRGSG 826
            MAFGSDRGRFTEVKRSVVDKNLGPLVKTVMTRCIQCTRCVRFATEVAGVQDLGMLGRGSG
Sbjct: 180  MAFGSDRGRFTEVKRSVVDKNLGPLVKTVMTRCIQCTRCVRFATEVAGVQDLGMLGRGSG 239

Query: 827  EEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKARNWELKGTESIDVTDAVGSNIRI 1006
            EEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKARNWELKGTE+IDV+DAVGSNIRI
Sbjct: 240  EEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKARNWELKGTETIDVSDAVGSNIRI 299

Query: 1007 DSRGPEVMRILPRLNEDINEEWISDKTRFCYDGLKRQRLNDPMIRGADGRFKAVSWRDAL 1186
            DSRGPEV+RI PRLNEDINEEWISDKTRFCYDGLKRQRLNDPMIRG DGRFK VSW DAL
Sbjct: 300  DSRGPEVLRITPRLNEDINEEWISDKTRFCYDGLKRQRLNDPMIRGTDGRFKVVSWHDAL 359

Query: 1187 AVVAEVIHQVKPEEIVGVAGKLSDAESMIALKDFLNKMGSNNVWCEGNGVHPNADL 1354
            AVVAE+ HQVKPEEIVG+AGKLSDAESM+ALKDFLNKMGSNNVWCEGNG  PNADL
Sbjct: 360  AVVAEIAHQVKPEEIVGIAGKLSDAESMMALKDFLNKMGSNNVWCEGNGPSPNADL 415


>ref|XP_002270157.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 1,
            mitochondrial [Vitis vinifera]
          Length = 746

 Score =  704 bits (1816), Expect = 0.0
 Identities = 347/398 (87%), Positives = 358/398 (89%)
 Frame = +2

Query: 161  TKNAFLRAIVSTPELNNXXXXXXXXXXXXXXXXXXXXXXXXXHYPNPDDVIEVFVDGYPV 340
            ++N   R I STPEL N                         H+  PDD IEVFVDGYPV
Sbjct: 25   SQNPITRTITSTPELKNPEAATAQPDSPPDLPPRTPVAGARIHFSKPDDAIEVFVDGYPV 84

Query: 341  KIPKGMTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASCAMPALPGMK 520
            KIPKGMTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASCAMPALPGMK
Sbjct: 85   KIPKGMTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASCAMPALPGMK 144

Query: 521  IKTDTPIAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEVKRSVV 700
            IKT TP+AKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFT++KRSVV
Sbjct: 145  IKTSTPVAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTDMKRSVV 204

Query: 701  DKNLGPLVKTVMTRCIQCTRCVRFATEVAGVQDLGMLGRGSGEEIGTYVEKLMTSELSGN 880
            DKNLGPLVKTVMTRCIQCTRCVRFATEVAGVQDLGMLGRGSGEEIGTYVEKLMTSELSGN
Sbjct: 205  DKNLGPLVKTVMTRCIQCTRCVRFATEVAGVQDLGMLGRGSGEEIGTYVEKLMTSELSGN 264

Query: 881  VIDICPVGALTSKPFAFKARNWELKGTESIDVTDAVGSNIRIDSRGPEVMRILPRLNEDI 1060
            VIDICPVGALTSKPFAFKARNWELKGTE+IDVTDAVGSNIRIDSRGPEVMRILPRLNEDI
Sbjct: 265  VIDICPVGALTSKPFAFKARNWELKGTETIDVTDAVGSNIRIDSRGPEVMRILPRLNEDI 324

Query: 1061 NEEWISDKTRFCYDGLKRQRLNDPMIRGADGRFKAVSWRDALAVVAEVIHQVKPEEIVGV 1240
            NEEWISDKTRFCYDGLKRQRLNDPMIRGADGRFK VSWRDALAVVAEV HQVKP+EIVG+
Sbjct: 325  NEEWISDKTRFCYDGLKRQRLNDPMIRGADGRFKPVSWRDALAVVAEVAHQVKPKEIVGI 384

Query: 1241 AGKLSDAESMIALKDFLNKMGSNNVWCEGNGVHPNADL 1354
            AG+LSDAESM+ALKDFLNKMGSNNV CEGNG HP ADL
Sbjct: 385  AGQLSDAESMMALKDFLNKMGSNNVLCEGNGSHPCADL 422


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