BLASTX nr result

ID: Panax21_contig00008630 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008630
         (1101 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD96961.1| hypothetical protein [Cleome spinosa]                  262   1e-71
ref|XP_004145641.1| PREDICTED: LOB domain-containing protein 41-...   269   1e-69
ref|XP_004164791.1| PREDICTED: LOB domain-containing protein 41-...   268   2e-69
emb|CBI33654.3| unnamed protein product [Vitis vinifera]              262   1e-67
ref|XP_002283795.1| PREDICTED: LOB domain-containing protein 41 ...   262   1e-67

>gb|ABD96961.1| hypothetical protein [Cleome spinosa]
          Length = 262

 Score =  262 bits (669), Expect(2) = 1e-71
 Identities = 125/139 (89%), Positives = 129/139 (92%)
 Frame = -2

Query: 1091 MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 912
            MRMSCNGCRVLRKGCSENCSIRPCL WIKSP++QANATVFLAKFYGRAGLMNLINAGPDH
Sbjct: 1    MRMSCNGCRVLRKGCSENCSIRPCLAWIKSPDAQANATVFLAKFYGRAGLMNLINAGPDH 60

Query: 911  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQNAVEAVLKGDHITQIATDAAETN 732
            LRPAIFRSLL+EACGRIVNPIYGSVGLLWSGSW LCQ AVEAVLKG+ IT IATDAA   
Sbjct: 61   LRPAIFRSLLHEACGRIVNPIYGSVGLLWSGSWHLCQAAVEAVLKGEPITPIATDAAADG 120

Query: 731  NGPPLKAYDIRHVSKDENS 675
             GPPLK YDIRHVSKDENS
Sbjct: 121  QGPPLKIYDIRHVSKDENS 139



 Score = 35.4 bits (80), Expect(2) = 1e-71
 Identities = 42/130 (32%), Positives = 52/130 (40%), Gaps = 9/130 (6%)
 Frame = -1

Query: 567 KPKD--SPIWIGSGDESGHEEFNRXXXXXXXXXXXSEAAPNVEGESLDTESLASVETGEG 394
           KP D   P  +G GDE+ HE               + AA +  GES +TES         
Sbjct: 161 KPVDPPEPKCVG-GDEASHES-----SLSHQSEVVAAAAAHDGGESKETES--------- 205

Query: 393 SGLFRNRGEAEAEDAMKQNTGGAENGEIELELSLGFQPVSRSRGVGNKKSE-------LY 235
                   E  AE  +       E GEIELEL+LG +PVSR+  V   K           
Sbjct: 206 --------ETTAEATV------TECGEIELELTLGMEPVSRAYHVVPMKKRRVGVFGTCQ 251

Query: 234 DGRACKMELM 205
           D   CK EL+
Sbjct: 252 DDSTCKTELV 261


>ref|XP_004145641.1| PREDICTED: LOB domain-containing protein 41-like [Cucumis sativus]
          Length = 364

 Score =  269 bits (687), Expect = 1e-69
 Identities = 129/140 (92%), Positives = 133/140 (95%)
 Frame = -2

Query: 1094 RMRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPD 915
            +MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPD
Sbjct: 62   KMRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPD 121

Query: 914  HLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQNAVEAVLKGDHITQIATDAAET 735
            HLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQ AVEAVLKG  IT I ++AA T
Sbjct: 122  HLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAATT 181

Query: 734  NNGPPLKAYDIRHVSKDENS 675
             +GPPLKAYDIRHVSKDENS
Sbjct: 182  GDGPPLKAYDIRHVSKDENS 201


>ref|XP_004164791.1| PREDICTED: LOB domain-containing protein 41-like [Cucumis sativus]
          Length = 253

 Score =  268 bits (685), Expect = 2e-69
 Identities = 129/139 (92%), Positives = 132/139 (94%)
 Frame = -2

Query: 1091 MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 912
            MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH
Sbjct: 1    MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 60

Query: 911  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQNAVEAVLKGDHITQIATDAAETN 732
            LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQ AVEAVLKG  IT I ++AA T 
Sbjct: 61   LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAATTG 120

Query: 731  NGPPLKAYDIRHVSKDENS 675
            +GPPLKAYDIRHVSKDENS
Sbjct: 121  DGPPLKAYDIRHVSKDENS 139


>emb|CBI33654.3| unnamed protein product [Vitis vinifera]
          Length = 187

 Score =  262 bits (669), Expect = 1e-67
 Identities = 123/139 (88%), Positives = 131/139 (94%)
 Frame = -2

Query: 1091 MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 912
            MRMSCNGCRVLRKGCS+NC+IRPCLQWIK+PESQANATVFLAKFYGRAGLMNLIN+GP+H
Sbjct: 1    MRMSCNGCRVLRKGCSDNCTIRPCLQWIKTPESQANATVFLAKFYGRAGLMNLINSGPEH 60

Query: 911  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQNAVEAVLKGDHITQIATDAAETN 732
            LRPAIF SLLYEACGRIVNPIYGSVGLLWSGSW LCQ AVEAVLKG+ ITQI ++AA T 
Sbjct: 61   LRPAIFSSLLYEACGRIVNPIYGSVGLLWSGSWHLCQAAVEAVLKGEPITQITSEAAATG 120

Query: 731  NGPPLKAYDIRHVSKDENS 675
             GPPLKAYDIRHVSKDENS
Sbjct: 121  QGPPLKAYDIRHVSKDENS 139


>ref|XP_002283795.1| PREDICTED: LOB domain-containing protein 41 [Vitis vinifera]
            gi|147795554|emb|CAN72182.1| hypothetical protein
            VITISV_004355 [Vitis vinifera]
          Length = 283

 Score =  262 bits (669), Expect = 1e-67
 Identities = 123/139 (88%), Positives = 131/139 (94%)
 Frame = -2

Query: 1091 MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 912
            MRMSCNGCRVLRKGCS+NC+IRPCLQWIK+PESQANATVFLAKFYGRAGLMNLIN+GP+H
Sbjct: 1    MRMSCNGCRVLRKGCSDNCTIRPCLQWIKTPESQANATVFLAKFYGRAGLMNLINSGPEH 60

Query: 911  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQNAVEAVLKGDHITQIATDAAETN 732
            LRPAIF SLLYEACGRIVNPIYGSVGLLWSGSW LCQ AVEAVLKG+ ITQI ++AA T 
Sbjct: 61   LRPAIFSSLLYEACGRIVNPIYGSVGLLWSGSWHLCQAAVEAVLKGEPITQITSEAAATG 120

Query: 731  NGPPLKAYDIRHVSKDENS 675
             GPPLKAYDIRHVSKDENS
Sbjct: 121  QGPPLKAYDIRHVSKDENS 139


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