BLASTX nr result

ID: Panax21_contig00008624 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008624
         (803 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38729.3| unnamed protein product [Vitis vinifera]              182   6e-44
ref|XP_002268369.1| PREDICTED: endoribonuclease Dicer homolog 1-...   182   6e-44
ref|XP_002515097.1| dicer-1, putative [Ricinus communis] gi|2235...   178   1e-42
ref|XP_004155270.1| PREDICTED: LOW QUALITY PROTEIN: endoribonucl...   176   5e-42
ref|XP_004134274.1| PREDICTED: endoribonuclease Dicer homolog 1-...   176   5e-42

>emb|CBI38729.3| unnamed protein product [Vitis vinifera]
          Length = 227

 Score =  182 bits (463), Expect = 6e-44
 Identities = 88/118 (74%), Positives = 94/118 (79%)
 Frame = +2

Query: 2   KMAQKLAARNALVXXXXXXXXXXXXXXXXXXXXXXSGTQTFTRQTLNDICLRRNWPMPLY 181
           KMAQKLAARNALV                      +G+QTFTRQTLNDICLRRNWPMP+Y
Sbjct: 109 KMAQKLAARNALVVLKERETAEAKEGDDENGKKKKNGSQTFTRQTLNDICLRRNWPMPVY 168

Query: 182 RCVNESGPAHAKRFTFAVRVNTSDRGWTDECVGEPMPSVKKAKDSAAVLLLELLNNWY 355
           RCVNE GPAHAKRFTFAVRVNT+D+GWTDEC+GEPMPSVKKAKDSAAVLLLELLN WY
Sbjct: 169 RCVNEGGPAHAKRFTFAVRVNTNDKGWTDECIGEPMPSVKKAKDSAAVLLLELLNKWY 226


>ref|XP_002268369.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Vitis vinifera]
          Length = 1971

 Score =  182 bits (463), Expect = 6e-44
 Identities = 88/118 (74%), Positives = 94/118 (79%)
 Frame = +2

Query: 2    KMAQKLAARNALVXXXXXXXXXXXXXXXXXXXXXXSGTQTFTRQTLNDICLRRNWPMPLY 181
            KMAQKLAARNALV                      +G+QTFTRQTLNDICLRRNWPMP+Y
Sbjct: 1853 KMAQKLAARNALVVLKERETAEAKEGDDENGKKKKNGSQTFTRQTLNDICLRRNWPMPVY 1912

Query: 182  RCVNESGPAHAKRFTFAVRVNTSDRGWTDECVGEPMPSVKKAKDSAAVLLLELLNNWY 355
            RCVNE GPAHAKRFTFAVRVNT+D+GWTDEC+GEPMPSVKKAKDSAAVLLLELLN WY
Sbjct: 1913 RCVNEGGPAHAKRFTFAVRVNTNDKGWTDECIGEPMPSVKKAKDSAAVLLLELLNKWY 1970


>ref|XP_002515097.1| dicer-1, putative [Ricinus communis] gi|223545577|gb|EEF47081.1|
            dicer-1, putative [Ricinus communis]
          Length = 1543

 Score =  178 bits (452), Expect = 1e-42
 Identities = 89/119 (74%), Positives = 92/119 (77%)
 Frame = +2

Query: 2    KMAQKLAARNALVXXXXXXXXXXXXXXXXXXXXXXSGTQTFTRQTLNDICLRRNWPMPLY 181
            KMAQKLAARNALV                      +G QTFTRQTLNDICLRRNWPMP Y
Sbjct: 1425 KMAQKLAARNALVILKDKETAEAKEKGNDNGKKKKNGNQTFTRQTLNDICLRRNWPMPFY 1484

Query: 182  RCVNESGPAHAKRFTFAVRVNTSDRGWTDECVGEPMPSVKKAKDSAAVLLLELLNNWYA 358
            RCVNE GPAHAKRFTFAVRVNT+DRGWTDECVGEPMPSVKKAKDSAAVLLLELLN  Y+
Sbjct: 1485 RCVNEGGPAHAKRFTFAVRVNTTDRGWTDECVGEPMPSVKKAKDSAAVLLLELLNKRYS 1543


>ref|XP_004155270.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer homolog 1-like
            [Cucumis sativus]
          Length = 1987

 Score =  176 bits (446), Expect = 5e-42
 Identities = 88/119 (73%), Positives = 92/119 (77%)
 Frame = +2

Query: 2    KMAQKLAARNALVXXXXXXXXXXXXXXXXXXXXXXSGTQTFTRQTLNDICLRRNWPMPLY 181
            KMAQKLAARNAL                       +G QTFTRQTLNDICLRRNWPMP Y
Sbjct: 1869 KMAQKLAARNALAVLKEKEMDDAKEKXEDNGKKKKNGNQTFTRQTLNDICLRRNWPMPFY 1928

Query: 182  RCVNESGPAHAKRFTFAVRVNTSDRGWTDECVGEPMPSVKKAKDSAAVLLLELLNNWYA 358
            RCVNE GPAHAKRFTFAVRVNT+D+GWTDECVGEPMPSVKKAKDSAAVLLLELLN  Y+
Sbjct: 1929 RCVNEGGPAHAKRFTFAVRVNTTDKGWTDECVGEPMPSVKKAKDSAAVLLLELLNKLYS 1987


>ref|XP_004134274.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Cucumis sativus]
          Length = 1986

 Score =  176 bits (446), Expect = 5e-42
 Identities = 87/119 (73%), Positives = 91/119 (76%)
 Frame = +2

Query: 2    KMAQKLAARNALVXXXXXXXXXXXXXXXXXXXXXXSGTQTFTRQTLNDICLRRNWPMPLY 181
            KMAQKLAARNAL                       +G QTFTRQTLNDICLRRNWPMP Y
Sbjct: 1868 KMAQKLAARNALAVLKEKEMDDAKEKIEDNGKKKKNGNQTFTRQTLNDICLRRNWPMPFY 1927

Query: 182  RCVNESGPAHAKRFTFAVRVNTSDRGWTDECVGEPMPSVKKAKDSAAVLLLELLNNWYA 358
            RCVNE GPAHAKRFTFAVRVNT+D+GWTDECVGEPMPSVKKAKDSAAVLLLELLN  Y+
Sbjct: 1928 RCVNEGGPAHAKRFTFAVRVNTTDKGWTDECVGEPMPSVKKAKDSAAVLLLELLNKLYS 1986


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