BLASTX nr result

ID: Panax21_contig00008619 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008619
         (598 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523770.1| conserved hypothetical protein [Ricinus comm...   115   4e-24
ref|XP_002306381.1| predicted protein [Populus trichocarpa] gi|2...   109   4e-22
ref|XP_002310075.1| predicted protein [Populus trichocarpa] gi|2...   103   2e-20
ref|XP_003534675.1| PREDICTED: uncharacterized protein At5g23160...   102   5e-20
ref|XP_002874112.1| hypothetical protein ARALYDRAFT_489172 [Arab...    99   7e-19

>ref|XP_002523770.1| conserved hypothetical protein [Ricinus communis]
           gi|223536982|gb|EEF38619.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 282

 Score =  115 bits (289), Expect = 4e-24
 Identities = 70/153 (45%), Positives = 94/153 (61%), Gaps = 12/153 (7%)
 Frame = +1

Query: 7   QKPSSRKKEKKTRTGSSNPGLPPVKKYVQSNRTTTLPPHSAS---------PPKKQKAIN 159
           +K S R+K    R GSS PG P  K   + NR+    P S S          P+K + I 
Sbjct: 135 KKFSLRRKIDTKRNGSSQPGSPEEKS--KPNRSI---PQSTSLQAATIQHKQPEKSRVIA 189

Query: 160 GRDDDKTD--GK-FDPVIGMSIIMVSLVIMLVWGKICAILCTSAWFYMVPRLRKVVDSND 330
            +D  K +  GK FDPVIGMSI+MV+L+IML+WG++CAILCT AW Y   RL+  +    
Sbjct: 190 KKDRRKNEMIGKGFDPVIGMSIVMVTLIIMLLWGRLCAILCTCAWLYFTRRLKTDMSPRQ 249

Query: 331 MEKMGSDSGGPDLNSEEHKKKVVLEGLLQRNHR 429
           +EK+    G PD +S+E+KK+VVLEG L+R+HR
Sbjct: 250 IEKI---RGEPDFSSDEYKKRVVLEGFLERDHR 279


>ref|XP_002306381.1| predicted protein [Populus trichocarpa] gi|222855830|gb|EEE93377.1|
           predicted protein [Populus trichocarpa]
          Length = 314

 Score =  109 bits (272), Expect = 4e-22
 Identities = 72/156 (46%), Positives = 100/156 (64%), Gaps = 15/156 (9%)
 Frame = +1

Query: 16  SSRKKEKKTRTGSSNPGLPPVK----KYVQSNRTTTLP--PH--SASPPK---KQKAING 162
           S R+K    R+G+S PG P VK    + V   R+T+ P  PH  SA+ P    +   + G
Sbjct: 163 SFRRKIDAIRSGTSQPGSPEVKAKSIRIVSITRSTSSPSLPHEKSATVPNTLGRSWVMAG 222

Query: 163 R---DDDKTDGK-FDPVIGMSIIMVSLVIMLVWGKICAILCTSAWFYMVPRLRKVVDSND 330
           +   ++D+ +GK  DP++GMSI++++L+IML+WGK+CAILC SAWFY VPRL     S D
Sbjct: 223 KPHKENDRPNGKKLDPLVGMSIVVMTLMIMLLWGKLCAILCASAWFYFVPRL----ISED 278

Query: 331 MEKMGSDSGGPDLNSEEHKKKVVLEGLLQRNHRRSV 438
             K GS     +L+SE++KKKVVLEG L+R  R SV
Sbjct: 279 DVKNGSIQREFNLDSEDYKKKVVLEGFLERK-RHSV 313


>ref|XP_002310075.1| predicted protein [Populus trichocarpa] gi|222852978|gb|EEE90525.1|
           predicted protein [Populus trichocarpa]
          Length = 299

 Score =  103 bits (258), Expect = 2e-20
 Identities = 69/166 (41%), Positives = 96/166 (57%), Gaps = 19/166 (11%)
 Frame = +1

Query: 1   TCQKPSSR-KKEKKTRTGSSNPGLPPVK-KYVQSNRTTTLPPHSASPPKKQKAING---- 162
           TC+K  S  +K    RTG++ PG P VK K +++    T    S S P ++ A       
Sbjct: 139 TCKKRLSFCRKVDAIRTGTNQPGSPEVKEKPIRTVSIITRSESSPSQPVERPATKTPNTA 198

Query: 163 -----------RDDDKTDGKFD--PVIGMSIIMVSLVIMLVWGKICAILCTSAWFYMVPR 303
                      +++D  +GK    P +GMSII+++LV+ML WGK+CAILCTSAWFY VPR
Sbjct: 199 ARSRFTIKRPRKENDHQNGKKSDHPFVGMSIIIMTLVLMLAWGKLCAILCTSAWFYFVPR 258

Query: 304 LRKVVDSNDMEKMGSDSGGPDLNSEEHKKKVVLEGLLQRNHRRSVA 441
           LR    S D    G  S     +SEE+KKKVV++G L+R+ RRS++
Sbjct: 259 LR----SEDSVSNGLISAESFYDSEEYKKKVVMDGFLERS-RRSIS 299


>ref|XP_003534675.1| PREDICTED: uncharacterized protein At5g23160-like [Glycine max]
          Length = 253

 Score =  102 bits (254), Expect = 5e-20
 Identities = 50/89 (56%), Positives = 65/89 (73%), Gaps = 4/89 (4%)
 Frame = +1

Query: 175 KTDGKFDPVIGMSIIMVSLVIMLVWGKICAILCTSAWFYMVPRLRK----VVDSNDMEKM 342
           K    +DPV+GMS+++V+LVIML WG++CAILCTSAW Y  PR RK    V D  D++  
Sbjct: 164 KAQNAYDPVVGMSVLVVTLVIMLFWGRLCAILCTSAWLYCTPRFRKSGGYVNDDEDLQT- 222

Query: 343 GSDSGGPDLNSEEHKKKVVLEGLLQRNHR 429
            + S   DL+SEE+KKKV++EGLL RNHR
Sbjct: 223 -TKSKEVDLDSEEYKKKVIMEGLLGRNHR 250


>ref|XP_002874112.1| hypothetical protein ARALYDRAFT_489172 [Arabidopsis lyrata subsp.
           lyrata] gi|297319949|gb|EFH50371.1| hypothetical protein
           ARALYDRAFT_489172 [Arabidopsis lyrata subsp. lyrata]
          Length = 273

 Score = 98.6 bits (244), Expect = 7e-19
 Identities = 56/117 (47%), Positives = 74/117 (63%), Gaps = 12/117 (10%)
 Frame = +1

Query: 124 SASPPK--KQKAINGRDDDKTDGKFDPVIGMSIIMVSLVIMLVWGKICAILCTSAWFYMV 297
           S S PK  ++K+   R   +   K DPVIG+SIIM++L+IML WG++CAILCTS W Y++
Sbjct: 158 SGSKPKEIREKSSRVRKGSRV-AKLDPVIGISIIMLTLMIMLTWGRLCAILCTSTWCYIL 216

Query: 298 PRLRKVVDSNDMEKM----------GSDSGGPDLNSEEHKKKVVLEGLLQRNHRRSV 438
           PRL++   +  + K           GS  G  DLNSE +KKKVVLEG L R HR S+
Sbjct: 217 PRLKEAATAVAVAKRKRNGSGKGEEGSFQGDLDLNSEAYKKKVVLEGFLVRQHRVSL 273


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