BLASTX nr result

ID: Panax21_contig00008601 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008601
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACZ54945.1| type 2 histone deacetylase a [Nicotiana tabacum]        87   1e-15
gb|ACZ54947.1| type 2 histone deacetylase c [Nicotiana tabacum]        86   3e-15
gb|ACZ54946.1| type 2 histone deacetylase b [Nicotiana tabacum]        82   6e-14
ref|XP_004137868.1| PREDICTED: uncharacterized protein LOC101207...    81   1e-13
sp|Q6V9I6.1|HDT1_SOLCH RecName: Full=Histone deacetylase HDT1; A...    80   2e-13

>gb|ACZ54945.1| type 2 histone deacetylase a [Nicotiana tabacum]
          Length = 295

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 42/60 (70%), Positives = 48/60 (80%)
 Frame = -1

Query: 188 TSKKVHLSKKRALESASKTTVVDKKAKLVTPKKTDGKKGNVHVDTPHPSKQAGKTPANKS 9
           T KK    KKR  +SA+KT V DKKAK VTP+KTDGKKG+ HV TPHPSKQAGK+PANK+
Sbjct: 199 TPKKAEPGKKRKADSATKTPVPDKKAKFVTPQKTDGKKGSGHVATPHPSKQAGKSPANKN 258


>gb|ACZ54947.1| type 2 histone deacetylase c [Nicotiana tabacum]
          Length = 282

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 43/61 (70%), Positives = 45/61 (73%)
 Frame = -1

Query: 188 TSKKVHLSKKRALESASKTTVVDKKAKLVTPKKTDGKKGNVHVDTPHPSKQAGKTPANKS 9
           T KK   SKKR  +SA KT   DKKAK  TP+KTDGKKG VHV TPHPSKQAGKT  NKS
Sbjct: 186 TPKKAEPSKKRPSDSAIKTPAPDKKAKFATPQKTDGKKGAVHVATPHPSKQAGKTSGNKS 245

Query: 8   N 6
           N
Sbjct: 246 N 246


>gb|ACZ54946.1| type 2 histone deacetylase b [Nicotiana tabacum]
          Length = 294

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 41/60 (68%), Positives = 47/60 (78%)
 Frame = -1

Query: 188 TSKKVHLSKKRALESASKTTVVDKKAKLVTPKKTDGKKGNVHVDTPHPSKQAGKTPANKS 9
           T KK    KKR  +SA+KT   DKKAK VTP+KTDGKKG+ HV TPHPSKQAGK+PANK+
Sbjct: 199 TPKKAEPGKKRKADSATKTPA-DKKAKFVTPQKTDGKKGSGHVATPHPSKQAGKSPANKN 257


>ref|XP_004137868.1| PREDICTED: uncharacterized protein LOC101207572 [Cucumis sativus]
           gi|449500996|ref|XP_004161249.1| PREDICTED:
           uncharacterized protein LOC101226213 [Cucumis sativus]
          Length = 318

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 40/57 (70%), Positives = 44/57 (77%)
 Frame = -1

Query: 188 TSKKVHLSKKRALESASKTTVVDKKAKLVTPKKTDGKKGNVHVDTPHPSKQAGKTPA 18
           T KK   SKKR L+SA+KT   DKKAKLVTP+KTDGKKG  HV TPHPSK+AGK  A
Sbjct: 218 TPKKAEASKKRPLDSANKTPAPDKKAKLVTPQKTDGKKGVAHVATPHPSKKAGKMAA 274


>sp|Q6V9I6.1|HDT1_SOLCH RecName: Full=Histone deacetylase HDT1; AltName: Full=Histone
           deacetylase 2a; Short=HD2a; AltName: Full=ScHD2a
           gi|33667906|gb|AAQ24532.1| histone deacetylase [Solanum
           chacoense]
          Length = 269

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 38/56 (67%), Positives = 43/56 (76%)
 Frame = -1

Query: 188 TSKKVHLSKKRALESASKTTVVDKKAKLVTPKKTDGKKGNVHVDTPHPSKQAGKTP 21
           T KK   +K+R  +SA+KT V DKKAKL TP+KTDGKKG  HV TPHPSKQA KTP
Sbjct: 181 TPKKAEPAKRRKADSATKTPVTDKKAKLTTPQKTDGKKGGGHVATPHPSKQASKTP 236


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