BLASTX nr result

ID: Panax21_contig00008585 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008585
         (647 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535974.1| PREDICTED: WD repeat-containing protein 55-l...   318   5e-85
ref|XP_002271081.1| PREDICTED: WD repeat-containing protein 55 [...   317   1e-84
ref|XP_003609086.1| WD-40 repeat protein [Medicago truncatula] g...   312   3e-83
ref|XP_002269842.1| PREDICTED: WD repeat-containing protein 55 [...   312   3e-83
gb|AFK42119.1| unknown [Medicago truncatula] gi|388510080|gb|AFK...   312   4e-83

>ref|XP_003535974.1| PREDICTED: WD repeat-containing protein 55-like [Glycine max]
          Length = 352

 Score =  318 bits (815), Expect = 5e-85
 Identities = 155/193 (80%), Positives = 173/193 (89%)
 Frame = +1

Query: 67  MEIDLGKLPFDLDFHPSNQLVAAGLITGDLLLYRYAADTTPERNFQVSAHTESCRAVRFV 246
           MEI LGKL FD+DFHPS+ LVAAGLITGDL LYRY  D+TP R  +V AHTESCRA RF+
Sbjct: 1   MEISLGKLAFDIDFHPSDNLVAAGLITGDLHLYRYTPDSTPVRMLEVHAHTESCRAARFI 60

Query: 247 NEGRAILTGSPDFSILATDVETGSPIARVENAHGAAVNRLVNLTDSTIASGDDEGCIKVW 426
           N GRAILTGSPD SILATDVETGS IAR+++AH AAVNRL+NLT+ST+ASGDDEGCIKVW
Sbjct: 61  NGGRAILTGSPDCSILATDVETGSTIARLDDAHEAAVNRLINLTESTVASGDDEGCIKVW 120

Query: 427 DTRQRSCCNSFSVHEEYISDMTFASDSMKLLATSGDGILSVCNLRSNKVQTRSEFSEDEL 606
           DTR+RSCCNSF+ HE+YISDMTF SD+MKLLATSGDG LSVCNLR NKVQ +SEFSEDEL
Sbjct: 121 DTRERSCCNSFNAHEDYISDMTFVSDAMKLLATSGDGTLSVCNLRRNKVQAQSEFSEDEL 180

Query: 607 LSVVIMKNGRKVI 645
           LSVV+MKNGRKV+
Sbjct: 181 LSVVLMKNGRKVV 193


>ref|XP_002271081.1| PREDICTED: WD repeat-containing protein 55 [Vitis vinifera]
           gi|297743547|emb|CBI36414.3| unnamed protein product
           [Vitis vinifera]
          Length = 346

 Score =  317 bits (812), Expect = 1e-84
 Identities = 157/194 (80%), Positives = 174/194 (89%), Gaps = 1/194 (0%)
 Frame = +1

Query: 67  MEIDLGKLPFDLDFHPSNQLVAAGLITGDLLLYRYAADTTPERNFQVSAH-TESCRAVRF 243
           MEI+LGKLPFD+DFHPSN LVAAGLI GDL LYRY A++ P+R  +V AH  ESCRAVRF
Sbjct: 1   MEINLGKLPFDIDFHPSNTLVAAGLINGDLHLYRYGANSLPQRLLEVHAHGDESCRAVRF 60

Query: 244 VNEGRAILTGSPDFSILATDVETGSPIARVENAHGAAVNRLVNLTDSTIASGDDEGCIKV 423
           +NEG AI+TGSPD SILATDVETGS IAR+E++HGAA+NRL+NLT++TIASGDDEGCIKV
Sbjct: 61  INEGHAIVTGSPDLSILATDVETGSAIARLEHSHGAAINRLINLTETTIASGDDEGCIKV 120

Query: 424 WDTRQRSCCNSFSVHEEYISDMTFASDSMKLLATSGDGILSVCNLRSNKVQTRSEFSEDE 603
           WDTRQ+SCCNSF  HEEYISDMTFASDSMKLL  SGDG LSVCNLR NKVQ +SEFSEDE
Sbjct: 121 WDTRQQSCCNSFDSHEEYISDMTFASDSMKLLGVSGDGTLSVCNLRRNKVQVQSEFSEDE 180

Query: 604 LLSVVIMKNGRKVI 645
           LLSVVIMKNGRKVI
Sbjct: 181 LLSVVIMKNGRKVI 194


>ref|XP_003609086.1| WD-40 repeat protein [Medicago truncatula]
           gi|355510141|gb|AES91283.1| WD-40 repeat protein
           [Medicago truncatula]
          Length = 420

 Score =  312 bits (800), Expect = 3e-83
 Identities = 152/197 (77%), Positives = 175/197 (88%), Gaps = 3/197 (1%)
 Frame = +1

Query: 64  KMEIDLGKLPFDLDFHPSNQLVAAGLITGDLLLYRYAADTT---PERNFQVSAHTESCRA 234
           +MEI+LGKL FD+DFHPS  LVA+GLI GDL LYRY++D T   P R  +V AHTESCRA
Sbjct: 61  EMEINLGKLAFDIDFHPSENLVASGLIDGDLHLYRYSSDNTNSDPVRVLEVHAHTESCRA 120

Query: 235 VRFVNEGRAILTGSPDFSILATDVETGSPIARVENAHGAAVNRLVNLTDSTIASGDDEGC 414
            RF+N GRA+LTGSPDFSILATDVETGS IAR++NAH AAVNRL+NLT+ST+ASGDD+GC
Sbjct: 121 ARFINGGRAVLTGSPDFSILATDVETGSTIARLDNAHEAAVNRLINLTESTVASGDDDGC 180

Query: 415 IKVWDTRQRSCCNSFSVHEEYISDMTFASDSMKLLATSGDGILSVCNLRSNKVQTRSEFS 594
           IKVWDTR+RSCCNSF  HE+YISD+TFASD+MK+LATSGDG LSVCNLR NKVQ +SEFS
Sbjct: 181 IKVWDTRERSCCNSFEAHEDYISDITFASDAMKILATSGDGTLSVCNLRRNKVQAQSEFS 240

Query: 595 EDELLSVVIMKNGRKVI 645
           EDELLSVV+MKNGRKV+
Sbjct: 241 EDELLSVVLMKNGRKVV 257


>ref|XP_002269842.1| PREDICTED: WD repeat-containing protein 55 [Vitis vinifera]
           gi|298205166|emb|CBI17225.3| unnamed protein product
           [Vitis vinifera]
          Length = 346

 Score =  312 bits (800), Expect = 3e-83
 Identities = 154/194 (79%), Positives = 174/194 (89%), Gaps = 1/194 (0%)
 Frame = +1

Query: 67  MEIDLGKLPFDLDFHPSNQLVAAGLITGDLLLYRYAADTTPERNFQVSAH-TESCRAVRF 243
           MEI+LGKLPFD+DFHPSN LVAAGLI GDL LYRY A++ P+R  +V AH  ESCRAVRF
Sbjct: 1   MEINLGKLPFDIDFHPSNTLVAAGLINGDLHLYRYGANSLPQRLLEVHAHGEESCRAVRF 60

Query: 244 VNEGRAILTGSPDFSILATDVETGSPIARVENAHGAAVNRLVNLTDSTIASGDDEGCIKV 423
           +N+G AI+TGSPD SILATDVETGS IAR+E++HGAA++RL+NLT++TIASGDDEGCIKV
Sbjct: 61  INKGHAIVTGSPDRSILATDVETGSAIARLEHSHGAAISRLINLTETTIASGDDEGCIKV 120

Query: 424 WDTRQRSCCNSFSVHEEYISDMTFASDSMKLLATSGDGILSVCNLRSNKVQTRSEFSEDE 603
           WDTRQ+SCCNSF  HEEYISDMTFASDSMKLL  SGDG LSVCNLR NKVQ +SEFSEDE
Sbjct: 121 WDTRQQSCCNSFDAHEEYISDMTFASDSMKLLGVSGDGTLSVCNLRRNKVQVQSEFSEDE 180

Query: 604 LLSVVIMKNGRKVI 645
           LLSVV+MKNGRKVI
Sbjct: 181 LLSVVLMKNGRKVI 194


>gb|AFK42119.1| unknown [Medicago truncatula] gi|388510080|gb|AFK43106.1| unknown
           [Medicago truncatula]
          Length = 359

 Score =  312 bits (799), Expect = 4e-83
 Identities = 152/196 (77%), Positives = 174/196 (88%), Gaps = 3/196 (1%)
 Frame = +1

Query: 67  MEIDLGKLPFDLDFHPSNQLVAAGLITGDLLLYRYAADTT---PERNFQVSAHTESCRAV 237
           MEI+LGKL FD+DFHPS  LVA+GLI GDL LYRY++D T   P R  +V AHTESCRA 
Sbjct: 1   MEINLGKLAFDIDFHPSENLVASGLIDGDLHLYRYSSDNTNSDPVRVLEVHAHTESCRAA 60

Query: 238 RFVNEGRAILTGSPDFSILATDVETGSPIARVENAHGAAVNRLVNLTDSTIASGDDEGCI 417
           RF+N GRA+LTGSPDFSILATDVETGS IAR++NAH AAVNRL+NLT+ST+ASGDD+GCI
Sbjct: 61  RFINGGRAVLTGSPDFSILATDVETGSTIARLDNAHEAAVNRLINLTESTVASGDDDGCI 120

Query: 418 KVWDTRQRSCCNSFSVHEEYISDMTFASDSMKLLATSGDGILSVCNLRSNKVQTRSEFSE 597
           KVWDTR+RSCCNSF  HE+YISD+TFASD+MK+LATSGDG LSVCNLR NKVQ +SEFSE
Sbjct: 121 KVWDTRERSCCNSFEAHEDYISDITFASDAMKILATSGDGTLSVCNLRRNKVQAQSEFSE 180

Query: 598 DELLSVVIMKNGRKVI 645
           DELLSVV+MKNGRKV+
Sbjct: 181 DELLSVVLMKNGRKVV 196