BLASTX nr result
ID: Panax21_contig00008565
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00008565
(1462 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278273.1| PREDICTED: replication protein A 70 kDa DNA-... 719 0.0
ref|XP_004157962.1| PREDICTED: replication protein A 70 kDa DNA-... 672 0.0
ref|XP_004141065.1| PREDICTED: replication protein A 70 kDa DNA-... 672 0.0
ref|XP_002514062.1| replication factor A 1, rfa1, putative [Rici... 657 0.0
ref|NP_178690.1| replication factor A1 [Arabidopsis thaliana] gi... 652 0.0
>ref|XP_002278273.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit [Vitis
vinifera] gi|297738589|emb|CBI27834.3| unnamed protein
product [Vitis vinifera]
Length = 622
Score = 719 bits (1857), Expect = 0.0
Identities = 359/446 (80%), Positives = 389/446 (87%)
Frame = -3
Query: 1340 MPVNLTANAISAIIAGDVNSKPLVQVLDIKLIGNSQERYRFLLSDGVSTQHAMLATQLND 1161
MPVNLT NAI+AI GDVNSKPLVQVLDIKLIGNSQERYRFLLSD V+TQ AMLATQLND
Sbjct: 1 MPVNLTPNAIAAINGGDVNSKPLVQVLDIKLIGNSQERYRFLLSDAVATQQAMLATQLND 60
Query: 1160 RVKTGRVIKGSVLQLIDYICSTVQNRKIIVVLNMETIIPECEIIGNPKMFSESESVAQKP 981
RVK+G+V KGSV+QLIDYICS VQNRKIIVVLNMETIIPECEIIGNPKM +ES S AQK
Sbjct: 61 RVKSGQVRKGSVIQLIDYICSVVQNRKIIVVLNMETIIPECEIIGNPKMNTESHSTAQKE 120
Query: 980 VPDXXXXXXXXXXXXXXXXXXXXXXTQGFRPTVQPAYQPPPNYRNQGTIMKNEAPARIIP 801
P FRP+VQP +QPPPNY++ GTI+KNEAPARIIP
Sbjct: 121 FPGGNRARSVGVTNNNLSVQNGGNKMPSFRPSVQPPFQPPPNYKSHGTILKNEAPARIIP 180
Query: 800 IAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 621
IAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF
Sbjct: 181 IAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 240
Query: 620 YDTIEVGKVYMISKGSLKPAQKNFNHLKNEWEIFLETTSTVDLCPDEDASIPKQQFSFRP 441
YDTIEVGKVY+ISKGSLKPAQKNFNHLKNEWEIFLE +S+V+LCPDED SIPKQQFSFRP
Sbjct: 241 YDTIEVGKVYLISKGSLKPAQKNFNHLKNEWEIFLEASSSVELCPDEDGSIPKQQFSFRP 300
Query: 440 ISEIENAESNTIVDVIGIVISVNPSVPILRKNGMETQRRVLNLKDQSGRSVELTLWGELC 261
ISEIEN E+N+I+DVIGIVISVNPSVPILRKNGMETQRR++NLKD SGRS+ELT+WGE C
Sbjct: 301 ISEIENVENNSILDVIGIVISVNPSVPILRKNGMETQRRIVNLKDGSGRSIELTMWGEFC 360
Query: 260 NREGQKLQVMVDSEFFPVVAVKAGKVNDFSGKSIGTISATQLFINPDFPEALTLRNWFDR 81
NREG +LQ M+DS FPV+AVK+GKVNDFSGKS+GTISATQLFINPDF EA LR WFDR
Sbjct: 361 NREGHQLQEMIDSGSFPVLAVKSGKVNDFSGKSVGTISATQLFINPDFTEACNLREWFDR 420
Query: 80 AGKNTTSQSISKDIVPGGSKNEIRKT 3
GKN SQSIS+DI+P GS+NEIRKT
Sbjct: 421 GGKNAASQSISRDIMPAGSRNEIRKT 446
>ref|XP_004157962.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Cucumis sativus]
Length = 623
Score = 672 bits (1734), Expect = 0.0
Identities = 332/446 (74%), Positives = 381/446 (85%)
Frame = -3
Query: 1340 MPVNLTANAISAIIAGDVNSKPLVQVLDIKLIGNSQERYRFLLSDGVSTQHAMLATQLND 1161
MPV+LT NAISAI+AGDVNSKPLVQVLDIKLIGN+QERY L+SD VS + AMLATQLND
Sbjct: 1 MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND 60
Query: 1160 RVKTGRVIKGSVLQLIDYICSTVQNRKIIVVLNMETIIPECEIIGNPKMFSESESVAQKP 981
VKTGRV KGSV+QLIDY+CS ++NRKIIVVL +ETII +CEIIGNPK ++SE+ AQK
Sbjct: 61 VVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSENFAQKA 120
Query: 980 VPDXXXXXXXXXXXXXXXXXXXXXXTQGFRPTVQPAYQPPPNYRNQGTIMKNEAPARIIP 801
P Q F+ TVQP YQPPPNY+N G I+KNEAPARIIP
Sbjct: 121 TPSVNLEQPAKVGNGHLSARNPVHNVQSFQATVQPPYQPPPNYKNHGAIIKNEAPARIIP 180
Query: 800 IAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 621
IAALNPYQGRWAIKARVTAKGDLRRYNNA+GDGKVFSFDLLDSDGGEIRVTCFNAVVDRF
Sbjct: 181 IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 240
Query: 620 YDTIEVGKVYMISKGSLKPAQKNFNHLKNEWEIFLETTSTVDLCPDEDASIPKQQFSFRP 441
Y+ IEVGKVY+ISKGSLKPA+K+FNHLKNEWE+FLE +STV+LCPDED +IP+QQFSF+P
Sbjct: 241 YEVIEVGKVYLISKGSLKPARKDFNHLKNEWEVFLEASSTVELCPDEDDTIPRQQFSFKP 300
Query: 440 ISEIENAESNTIVDVIGIVISVNPSVPILRKNGMETQRRVLNLKDQSGRSVELTLWGELC 261
ISEIENAE+N+I+DVIGIV S+NPS+P+LRKNGMETQRRV+ LKD SGRSVELT+WG+ C
Sbjct: 301 ISEIENAETNSILDVIGIVTSINPSIPVLRKNGMETQRRVVYLKDASGRSVELTMWGDFC 360
Query: 260 NREGQKLQVMVDSEFFPVVAVKAGKVNDFSGKSIGTISATQLFINPDFPEALTLRNWFDR 81
N+EGQKLQ ++ S PV+AVK+GKV+DF+GKSIGTIS+TQLFINPD PEA LR W+D
Sbjct: 361 NKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLPEAHILREWYDG 420
Query: 80 AGKNTTSQSISKDIVPGGSKNEIRKT 3
GKNTTS SISK+IVPG +KN+IRKT
Sbjct: 421 GGKNTTSLSISKEIVPGSAKNDIRKT 446
>ref|XP_004141065.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Cucumis sativus]
Length = 694
Score = 672 bits (1734), Expect = 0.0
Identities = 332/446 (74%), Positives = 381/446 (85%)
Frame = -3
Query: 1340 MPVNLTANAISAIIAGDVNSKPLVQVLDIKLIGNSQERYRFLLSDGVSTQHAMLATQLND 1161
MPV+LT NAISAI+AGDVNSKPLVQVLDIKLIGN+QERY L+SD VS + AMLATQLND
Sbjct: 1 MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND 60
Query: 1160 RVKTGRVIKGSVLQLIDYICSTVQNRKIIVVLNMETIIPECEIIGNPKMFSESESVAQKP 981
VKTGRV KGSV+QLIDY+CS ++NRKIIVVL +ETII +CEIIGNPK ++SE+ AQK
Sbjct: 61 VVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSENFAQKA 120
Query: 980 VPDXXXXXXXXXXXXXXXXXXXXXXTQGFRPTVQPAYQPPPNYRNQGTIMKNEAPARIIP 801
P Q F+ TVQP YQPPPNY+N G I+KNEAPARIIP
Sbjct: 121 TPSVNLEQPAKVGNGHLSARNPVHNVQSFQATVQPPYQPPPNYKNHGAIIKNEAPARIIP 180
Query: 800 IAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 621
IAALNPYQGRWAIKARVTAKGDLRRYNNA+GDGKVFSFDLLDSDGGEIRVTCFNAVVDRF
Sbjct: 181 IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 240
Query: 620 YDTIEVGKVYMISKGSLKPAQKNFNHLKNEWEIFLETTSTVDLCPDEDASIPKQQFSFRP 441
Y+ IEVGKVY+ISKGSLKPA+K+FNHLKNEWE+FLE +STV+LCPDED +IP+QQFSF+P
Sbjct: 241 YEVIEVGKVYLISKGSLKPARKDFNHLKNEWEVFLEASSTVELCPDEDDTIPRQQFSFKP 300
Query: 440 ISEIENAESNTIVDVIGIVISVNPSVPILRKNGMETQRRVLNLKDQSGRSVELTLWGELC 261
ISEIENAE+N+I+DVIGIV S+NPS+P+LRKNGMETQRRV+ LKD SGRSVELT+WG+ C
Sbjct: 301 ISEIENAETNSILDVIGIVTSINPSIPVLRKNGMETQRRVVYLKDASGRSVELTMWGDFC 360
Query: 260 NREGQKLQVMVDSEFFPVVAVKAGKVNDFSGKSIGTISATQLFINPDFPEALTLRNWFDR 81
N+EGQKLQ ++ S PV+AVK+GKV+DF+GKSIGTIS+TQLFINPD PEA LR W+D
Sbjct: 361 NKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLPEAHILREWYDG 420
Query: 80 AGKNTTSQSISKDIVPGGSKNEIRKT 3
GKNTTS SISK+IVPG +KN+IRKT
Sbjct: 421 GGKNTTSLSISKEIVPGSAKNDIRKT 446
>ref|XP_002514062.1| replication factor A 1, rfa1, putative [Ricinus communis]
gi|223546518|gb|EEF48016.1| replication factor A 1, rfa1,
putative [Ricinus communis]
Length = 670
Score = 657 bits (1696), Expect = 0.0
Identities = 348/492 (70%), Positives = 383/492 (77%), Gaps = 46/492 (9%)
Frame = -3
Query: 1340 MPVNLTANAISAIIAGDVNSKPLVQVLDIKLIGNSQERYRFLLSDGVSTQHAMLATQLND 1161
MPVNLT NAIS I GDVN KPLVQV+DIK IG++QERYRFL+SD VSTQHAMLATQLND
Sbjct: 1 MPVNLTPNAISMINGGDVNMKPLVQVVDIKQIGSAQERYRFLISDSVSTQHAMLATQLND 60
Query: 1160 RVKTGRVIKGSVLQLIDYICSTVQNRKIIVVLNMETIIPECEIIGNPK----MFSE---- 1005
RVK G V KGSV+QLIDYICS VQNRKIIVVLN+ETIIPECEIIGN K MF++
Sbjct: 61 RVKHGFVKKGSVVQLIDYICSEVQNRKIIVVLNLETIIPECEIIGNAKTLTDMFAQKASQ 120
Query: 1004 -SESVAQKPVPDXXXXXXXXXXXXXXXXXXXXXXTQG-----FRPT-------------- 885
SV V QG FRPT
Sbjct: 121 NGNSVQSAGVGYNNSSARNHDNNVQNFQPPLSAHNQGSSMHNFRPTFSSQNHGNNMQNFT 180
Query: 884 ------------------VQPAYQPPPNYRNQGTIMKNEAPARIIPIAALNPYQGRWAIK 759
VQP Y+PPPNYRN G IMKNEAPARIIPIAALNPYQGRWAIK
Sbjct: 181 SNLSAQNYGNNIQSFQPNVQPPYRPPPNYRNHGAIMKNEAPARIIPIAALNPYQGRWAIK 240
Query: 758 ARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYDTIEVGKVYMISK 579
ARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV+RFYD IEVG+VY+ISK
Sbjct: 241 ARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVERFYDVIEVGRVYLISK 300
Query: 578 GSLKPAQKNFNHLKNEWEIFLETTSTVDLCPDEDASIPKQQFSFRPISEIENAESNTIVD 399
GSLKPAQ+NFNHLKNEWEIFLE TSTVDLCPD D SIPKQQF+F+ ISEIEN E+N+I+D
Sbjct: 301 GSLKPAQRNFNHLKNEWEIFLEATSTVDLCPDGDNSIPKQQFTFKTISEIENVENNSILD 360
Query: 398 VIGIVISVNPSVPILRKNGMETQRRVLNLKDQSGRSVELTLWGELCNREGQKLQVMVDSE 219
VIGIVISVNPSVPILRKNGMETQRR+LNLKD SGR++ELTLWG+ CN+EGQ+LQ +VDS
Sbjct: 361 VIGIVISVNPSVPILRKNGMETQRRILNLKDGSGRNIELTLWGDFCNKEGQQLQEIVDSG 420
Query: 218 FFPVVAVKAGKVNDFSGKSIGTISATQLFINPDFPEALTLRNWFDRAGKNTTSQSISKDI 39
FPV+AVKAGKV+DFSGKS+GTIS+TQLFINPD PEA L++WFDR G++T S SIS+DI
Sbjct: 421 DFPVLAVKAGKVSDFSGKSLGTISSTQLFINPDIPEAHGLKDWFDRGGQHTASVSISRDI 480
Query: 38 VPGGSKNEIRKT 3
+PGGSKNEIRKT
Sbjct: 481 LPGGSKNEIRKT 492
>ref|NP_178690.1| replication factor A1 [Arabidopsis thaliana]
gi|4584356|gb|AAD25150.1| putative replication protein A1
[Arabidopsis thaliana] gi|26452416|dbj|BAC43293.1|
putative replication protein A1 [Arabidopsis thaliana]
gi|29029004|gb|AAO64881.1| At2g06510 [Arabidopsis
thaliana] gi|330250916|gb|AEC06010.1| replication factor
A1 [Arabidopsis thaliana]
Length = 640
Score = 652 bits (1682), Expect = 0.0
Identities = 330/465 (70%), Positives = 382/465 (82%), Gaps = 20/465 (4%)
Frame = -3
Query: 1340 MPVNLTANAISAIIAGDVNSKPLVQVLDIKLIGNSQER----YRFLLSDGVSTQHAMLAT 1173
MPV+LT NAI+AI GDVN KPL+QVL+IK+IG SQER YRFL+SDGVS QHAM+A
Sbjct: 1 MPVSLTPNAITAIHDGDVNLKPLLQVLEIKMIGRSQERSQERYRFLISDGVSAQHAMVAV 60
Query: 1172 QLNDRVKTGRVIKGSVLQLIDYICSTVQNRKIIVVLNMETIIPECEIIGNPKMFSESESV 993
QLNDRVK+G+ KGS++QLIDYICS V+ RK+IVVLNMETI+ + E IGNP +F E+++
Sbjct: 61 QLNDRVKSGQFEKGSIVQLIDYICSDVKGRKLIVVLNMETIVQQSETIGNPTIFGETDTE 120
Query: 992 AQK--------PVPDXXXXXXXXXXXXXXXXXXXXXXTQG-------FRPTVQPAYQPPP 858
AQK P P+ Q FRP+VQP+YQPP
Sbjct: 121 AQKTFSGTGNIPPPNRVVFNEPMVQHSVNRAPPRGVNIQNQANNTPSFRPSVQPSYQPPA 180
Query: 857 NYRNQGTIMKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLL 678
+YRN G IMKNEAPAR+IPIAALNPYQGRWAIKARVTAKGD+RRYNNA+GDGKVFSFDLL
Sbjct: 181 SYRNHGPIMKNEAPARVIPIAALNPYQGRWAIKARVTAKGDIRRYNNAKGDGKVFSFDLL 240
Query: 677 DSDGGEIRVTCFNAVVDRFYDTIEVGKVYMISKGSLKPAQKNFNHLKNEWEIFLETTSTV 498
D DGGEIRVTCFNA+VDRFYD EVGKVY+ISKGSLKPAQKNFNHLKNEWEIFLE+TSTV
Sbjct: 241 DYDGGEIRVTCFNALVDRFYDVTEVGKVYLISKGSLKPAQKNFNHLKNEWEIFLESTSTV 300
Query: 497 DLCPDEDASIPKQQFSFRPISEIENAESNTIVDVIGIVISVNPSVPILRKNGMETQRRVL 318
+LCPDED SIPKQQFSFRPIS+IENAE+NTI+DVIG+V SVNPSVPILRKNGMET RR+L
Sbjct: 301 ELCPDEDGSIPKQQFSFRPISDIENAENNTILDVIGVVTSVNPSVPILRKNGMETHRRIL 360
Query: 317 NLKDQSGRSVELTLWGELCNREGQKLQVMVDSEFFPVVAVKAGKVNDFSGKSIGTISATQ 138
NLKD+SG++VE+TLWGE CNR+G++L+ MVDS F PV+A+KAGKV+DFSGKS+GTIS+TQ
Sbjct: 361 NLKDESGKAVEVTLWGEFCNRDGRQLEEMVDSAFHPVLAIKAGKVSDFSGKSVGTISSTQ 420
Query: 137 LFINPDFPEALTLRNWFDRAGKNTTSQSISKDIVPGG-SKNEIRK 6
LFINPDFPEA LR WFD GK+T S SIS+D +PGG S+NEIRK
Sbjct: 421 LFINPDFPEAHKLRTWFDYGGKDTASFSISRDTMPGGVSRNEIRK 465