BLASTX nr result

ID: Panax21_contig00008558 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008558
         (978 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533339.1| conserved hypothetical protein [Ricinus comm...    73   1e-10
ref|XP_002310372.1| predicted protein [Populus trichocarpa] gi|2...    70   8e-10
ref|XP_003632091.1| PREDICTED: uncharacterized protein LOC100854...    66   1e-08
ref|XP_002331642.1| predicted protein [Populus trichocarpa] gi|1...    58   3e-06
ref|NP_001234679.1| ARGOS [Solanum lycopersicum] gi|224038410|gb...    58   4e-06

>ref|XP_002533339.1| conserved hypothetical protein [Ricinus communis]
           gi|223526830|gb|EEF29048.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 138

 Score = 72.8 bits (177), Expect = 1e-10
 Identities = 54/141 (38%), Positives = 69/141 (48%), Gaps = 2/141 (1%)
 Frame = -1

Query: 621 MCFETLEAEQLILPKRSTNLQDHHSRRAM-MDARTMNNSNSPSFPRKGPHTTTTFVESRK 445
           M FE  E +         +LQDH+S   M + AR M    +P+   + P      VE +K
Sbjct: 1   MSFEHSETDSRFSRSSIIHLQDHYSSNVMDVRARKMGTGTTPA---QAPPPFR--VEKKK 55

Query: 444 IEYQRSFSQG-HGRKMFSSKSYFSLESLFILICLTASXXXXXXXXXXXXXXXXXXXXXXX 268
           +EYQRS SQG  GR++F + SYFSLESL +LICLTAS                       
Sbjct: 56  MEYQRSLSQGSSGRRLFPA-SYFSLESLLLLICLTASLLILPLILPPLPPPPFLLLLLPI 114

Query: 267 XXXXXXXXLAFMPSNVRDVTY 205
                   LAFMP+N RD+TY
Sbjct: 115 GILAVLMILAFMPANARDITY 135


>ref|XP_002310372.1| predicted protein [Populus trichocarpa] gi|222853275|gb|EEE90822.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score = 70.1 bits (170), Expect = 8e-10
 Identities = 52/140 (37%), Positives = 68/140 (48%), Gaps = 1/140 (0%)
 Frame = -1

Query: 621 MCFETLEAEQLILPKRSTNLQDHHSRRAM-MDARTMNNSNSPSFPRKGPHTTTTFVESRK 445
           M FE  E+E  + P+   NLQD  S   M + AR +  +N  + P        T VE RK
Sbjct: 1   MSFEHSESETRV-PRSRINLQDRCSSSIMDVRARKITTNNPLATP------PNTRVEKRK 53

Query: 444 IEYQRSFSQGHGRKMFSSKSYFSLESLFILICLTASXXXXXXXXXXXXXXXXXXXXXXXX 265
           +EY RS SQG  R++ ++ S+FSL SL +L+CLTAS                        
Sbjct: 54  MEYNRSLSQGSSRRLLTA-SHFSLVSLLLLVCLTASLLILPLVLPPLPPPPFMLLLLPIG 112

Query: 264 XXXXXXXLAFMPSNVRDVTY 205
                  LAFMPSN RD+TY
Sbjct: 113 ILVLLMFLAFMPSNARDITY 132


>ref|XP_003632091.1| PREDICTED: uncharacterized protein LOC100854957 [Vitis vinifera]
          Length = 139

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 51/140 (36%), Positives = 66/140 (47%), Gaps = 1/140 (0%)
 Frame = -1

Query: 621 MCFETLEAEQLILPKRSTNLQDHHSRRAMMDARTMNNSNSPSFPRKGPHTTTTFVESRKI 442
           M  E  EA+  +      NLQD +    +M+AR   NS      RK P  T    E +K+
Sbjct: 1   MSIEQPEADSRLSEGPLINLQDRYLS-GIMEARGRRNSAPLQVERKNP--TPPMAEGKKM 57

Query: 441 EYQRS-FSQGHGRKMFSSKSYFSLESLFILICLTASXXXXXXXXXXXXXXXXXXXXXXXX 265
           EY R+  S+ + R++  + SYFSLESL +LICLTAS                        
Sbjct: 58  EYNRTPLSRENSRRLIPA-SYFSLESLLLLICLTASLLILPLILPPLPPPPFMLLLLPIG 116

Query: 264 XXXXXXXLAFMPSNVRDVTY 205
                  LAFMPSNVRD+TY
Sbjct: 117 ILAVLMILAFMPSNVRDLTY 136


>ref|XP_002331642.1| predicted protein [Populus trichocarpa] gi|118487626|gb|ABK95638.1|
           unknown [Populus trichocarpa]
           gi|222874038|gb|EEF11169.1| predicted protein [Populus
           trichocarpa]
          Length = 107

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 42/115 (36%), Positives = 56/115 (48%), Gaps = 4/115 (3%)
 Frame = -1

Query: 534 MDAR----TMNNSNSPSFPRKGPHTTTTFVESRKIEYQRSFSQGHGRKMFSSKSYFSLES 367
           MD R    T NN  +P      P+T+    E +KIEY RS SQG  R++ ++ S+FSL S
Sbjct: 1   MDVRARKITANNHRAP------PNTSA---EEKKIEYNRSLSQGSTRRLLTT-SHFSLAS 50

Query: 366 LFILICLTASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAFMPSNVRDVTYA 202
           L +L+C+TAS                               LAFMPSN RD+T+A
Sbjct: 51  LLLLMCITASLLILPLVLAPLPPPPFMLLLLPIGILVVLIVLAFMPSNARDITFA 105


>ref|NP_001234679.1| ARGOS [Solanum lycopersicum] gi|224038410|gb|ACN38309.1| ARGOS
           [Solanum lycopersicum]
          Length = 118

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 35/84 (41%), Positives = 46/84 (54%)
 Frame = -1

Query: 459 VESRKIEYQRSFSQGHGRKMFSSKSYFSLESLFILICLTASXXXXXXXXXXXXXXXXXXX 280
           +E  K+E++RSF+QGHG+KM  S +YFSLES+ +L+ LTAS                   
Sbjct: 32  MEGNKMEHKRSFTQGHGKKML-SMNYFSLESIILLLGLTASLLLLPLMLPPLPPPPFMLL 90

Query: 279 XXXXXXXXXXXXLAFMPSNVRDVT 208
                       LAFMPSNVR+VT
Sbjct: 91  LVPIFILVVLMILAFMPSNVRNVT 114


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