BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008555
         (552 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19367.3| unnamed protein product [Vitis vinifera]              142   3e-32
ref|XP_004141297.1| PREDICTED: pre-mRNA-processing protein 40A-l...   130   1e-28
ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 hom...   129   4e-28
ref|XP_002320019.1| predicted protein [Populus trichocarpa] gi|2...   128   7e-28
ref|XP_003545351.1| PREDICTED: pre-mRNA-processing factor 40 hom...   110   2e-22

>emb|CBI19367.3| unnamed protein product [Vitis vinifera]
          Length = 1030

 Score =  142 bits (359), Expect = 3e-32
 Identities = 76/135 (56%), Positives = 99/135 (73%), Gaps = 3/135 (2%)
 Frame = -3

Query: 397 PLITISGSSATPVENSSATTAA-GV--SSLTPSPAVVPESMGTPVALLNANTTPITGSEN 227
           P + +SG+SA P+  S+ TT+A GV  S  TP PA V  S G   A +N N T +T  EN
Sbjct: 364 PPVVVSGTSAIPIAQSAVTTSAVGVQPSMGTPLPAAVSGSTGVAAAFINPNATSMTSFEN 423

Query: 226 SASHDVGNSFNGASVQDIEEAKKGMPVAGKTNVTPLEDNTVEDEPLLYASKQEAKNAFKA 47
            ++    ++ NGAS+QDIEEAKKG+ VAGK NVTPLE+ T++DEPL+Y++K EAKNAFKA
Sbjct: 424 LSA----DATNGASMQDIEEAKKGVAVAGKINVTPLEEKTLDDEPLVYSTKLEAKNAFKA 479

Query: 46  LLESANVKADWNWEQ 2
           LLESANV++DW W+Q
Sbjct: 480 LLESANVESDWTWDQ 494


>ref|XP_004141297.1| PREDICTED: pre-mRNA-processing protein 40A-like [Cucumis sativus]
          Length = 985

 Score =  130 bits (327), Expect = 1e-28
 Identities = 70/138 (50%), Positives = 94/138 (68%), Gaps = 6/138 (4%)
 Frame = -3

Query: 397 PLITISGSSATPVENSSATTAAGVSSLTP-----SPAVVPESMGT-PVALLNANTTPITG 236
           P +++S S +  V  SSA T   ++S T      S   V  S GT P A+++AN + +T 
Sbjct: 317 PFVSVSNSPSVMVTGSSAITGTPIASTTSVSGTVSSQSVAASGGTGPPAVVHANASSVTP 376

Query: 235 SENSASHDVGNSFNGASVQDIEEAKKGMPVAGKTNVTPLEDNTVEDEPLLYASKQEAKNA 56
            E+ AS DV N+ +G S +DIEEA+KGM VAGK N T LE+ + +DEPL++A+KQEAKNA
Sbjct: 377 FESLASQDVKNTVDGTSTEDIEEARKGMAVAGKVNETVLEEKSADDEPLVFANKQEAKNA 436

Query: 55  FKALLESANVKADWNWEQ 2
           FKALLES NV++DW WEQ
Sbjct: 437 FKALLESVNVQSDWTWEQ 454


>ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Vitis
           vinifera]
          Length = 1020

 Score =  129 bits (323), Expect = 4e-28
 Identities = 68/132 (51%), Positives = 92/132 (69%)
 Frame = -3

Query: 397 PLITISGSSATPVENSSATTAAGVSSLTPSPAVVPESMGTPVALLNANTTPITGSENSAS 218
           P + +SG+SA P+  S+ TT+A           V  SMGTP+         ++GS   A+
Sbjct: 368 PPVVVSGTSAIPIAQSAVTTSA---------VGVQPSMGTPLP------AAVSGSTGVAA 412

Query: 217 HDVGNSFNGASVQDIEEAKKGMPVAGKTNVTPLEDNTVEDEPLLYASKQEAKNAFKALLE 38
           +   ++ NGAS+QDIEEAKKG+ VAGK NVTPLE+ T++DEPL+Y++K EAKNAFKALLE
Sbjct: 413 NLSADATNGASMQDIEEAKKGVAVAGKINVTPLEEKTLDDEPLVYSTKLEAKNAFKALLE 472

Query: 37  SANVKADWNWEQ 2
           SANV++DW W+Q
Sbjct: 473 SANVESDWTWDQ 484


>ref|XP_002320019.1| predicted protein [Populus trichocarpa] gi|222860792|gb|EEE98334.1|
           predicted protein [Populus trichocarpa]
          Length = 1019

 Score =  128 bits (321), Expect = 7e-28
 Identities = 65/133 (48%), Positives = 87/133 (65%), Gaps = 1/133 (0%)
 Frame = -3

Query: 397 PLITISGSSATPVENSSATTAAGVS-SLTPSPAVVPESMGTPVALLNANTTPITGSENSA 221
           P + +SGS A PV +S+  +A GV  S+TP P  V    G P A ++A TT ++  +N  
Sbjct: 337 PPVVVSGSPALPVAHSTTASAVGVQPSVTPLPTAVSVGTGAPAAAVDAKTTSLSSIDNLL 396

Query: 220 SHDVGNSFNGASVQDIEEAKKGMPVAGKTNVTPLEDNTVEDEPLLYASKQEAKNAFKALL 41
           S    NS +GAS+ D  E  K     GKTN +PLE+ T ++EPL++A+K EAKNAFKALL
Sbjct: 397 SQSAANSVDGASMMDTAEFNKVSMDMGKTNASPLEEKTPDEEPLVFANKLEAKNAFKALL 456

Query: 40  ESANVKADWNWEQ 2
           ESANV++DW WEQ
Sbjct: 457 ESANVQSDWTWEQ 469


>ref|XP_003545351.1| PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Glycine
           max]
          Length = 1002

 Score =  110 bits (274), Expect = 2e-22
 Identities = 79/196 (40%), Positives = 100/196 (51%), Gaps = 18/196 (9%)
 Frame = -3

Query: 535 AATEGTQSEMVDTPATPLSSTEQXXXXXXXXXXXXXXXXXXXXXXVPLIT---------- 386
           AA +G QSE  DT    +SSTE                        P             
Sbjct: 277 AANQGMQSETSDTCNAVVSSTETPTPTAANAASLNTSLTSNGLASSPSSVTPIAATDSQR 336

Query: 385 -ISGSSATPVENSSATTAAGVSSLTPSPAVVPESMGTPVALLN--ANTTPITGS-----E 230
            +SG S T V +S AT +   + + PS  V   +  T VA  +  A  +P         E
Sbjct: 337 LVSGLSGTSVSHSMATPS--TTGVEPSTVVTTSAAPTIVAGSSGLAENSPQQPKMPPVVE 394

Query: 229 NSASHDVGNSFNGASVQDIEEAKKGMPVAGKTNVTPLEDNTVEDEPLLYASKQEAKNAFK 50
           N AS D   S NG+S+QDIEEAK+ +PV GK NVTP E+ T +DE L+YA+K EAKNAFK
Sbjct: 395 NQASQDFA-SANGSSLQDIEEAKRPLPVVGKNNVTPPEEKTNDDETLVYANKLEAKNAFK 453

Query: 49  ALLESANVKADWNWEQ 2
           ALLES +V++DW WEQ
Sbjct: 454 ALLESVSVQSDWTWEQ 469