BLASTX nr result

ID: Panax21_contig00008530 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008530
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274515.2| PREDICTED: zinc finger CCCH domain-containin...    89   4e-18
emb|CBI38961.3| unnamed protein product [Vitis vinifera]               89   5e-16
gb|EEE66321.1| hypothetical protein OsJ_22559 [Oryza sativa Japo...    67   8e-11
ref|NP_001058507.1| Os06g0704300 [Oryza sativa Japonica Group] g...    67   9e-11
gb|EEC81277.1| hypothetical protein OsI_24382 [Oryza sativa Indi...    66   1e-10

>ref|XP_002274515.2| PREDICTED: zinc finger CCCH domain-containing protein 16-like
           [Vitis vinifera]
          Length = 383

 Score = 88.6 bits (218), Expect(2) = 4e-18
 Identities = 38/51 (74%), Positives = 41/51 (80%)
 Frame = +3

Query: 207 CQYGDRCKFLHVTQQQTKPNAFGFGPQNGTQFPHTNTQQQKPNPFGFGVQS 359
           CQYG+RCKFLHVTQQQ KPN  GFG Q  + F HTN QQQ+ NPFGFGVQS
Sbjct: 16  CQYGERCKFLHVTQQQPKPNVSGFGAQTSSNFQHTNVQQQRSNPFGFGVQS 66



 Score = 27.3 bits (59), Expect(2) = 4e-18
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = +1

Query: 94  MPPRREPCRNFQRG 135
           M  ++EPCRNFQRG
Sbjct: 1   MNRKKEPCRNFQRG 14


>emb|CBI38961.3| unnamed protein product [Vitis vinifera]
          Length = 394

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 38/51 (74%), Positives = 41/51 (80%)
 Frame = +3

Query: 207 CQYGDRCKFLHVTQQQTKPNAFGFGPQNGTQFPHTNTQQQKPNPFGFGVQS 359
           CQYG+RCKFLHVTQQQ KPN  GFG Q  + F HTN QQQ+ NPFGFGVQS
Sbjct: 14  CQYGERCKFLHVTQQQPKPNVSGFGAQTSSNFQHTNVQQQRSNPFGFGVQS 64


>gb|EEE66321.1| hypothetical protein OsJ_22559 [Oryza sativa Japonica Group]
          Length = 1360

 Score = 66.6 bits (161), Expect(2) = 8e-11
 Identities = 33/64 (51%), Positives = 39/64 (60%), Gaps = 14/64 (21%)
 Frame = +3

Query: 207 CQYGDRCKFLHVT------QQQTKPNAFGFG--------PQNGTQFPHTNTQQQKPNPFG 344
           C+YG +C++LH +      QQQ KPN FGFG        P  G+QF     QQQKPNPFG
Sbjct: 16  CKYGAQCRYLHASPHQQQQQQQAKPNPFGFGTGSRQQQQPSFGSQFQQQQQQQQKPNPFG 75

Query: 345 FGVQ 356
           FGVQ
Sbjct: 76  FGVQ 79



 Score = 24.6 bits (52), Expect(2) = 8e-11
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = +1

Query: 94  MPPRREPCRNFQRG 135
           M  R+E CRNFQRG
Sbjct: 1   MSRRQEICRNFQRG 14


>ref|NP_001058507.1| Os06g0704300 [Oryza sativa Japonica Group]
           gi|75252808|sp|Q5Z807.1|C3H46_ORYSJ RecName: Full=Zinc
           finger CCCH domain-containing protein 46; Short=OsC3H46
           gi|53791927|dbj|BAD54049.1| zinc finger protein-like
           [Oryza sativa Japonica Group]
           gi|113596547|dbj|BAF20421.1| Os06g0704300 [Oryza sativa
           Japonica Group]
          Length = 390

 Score = 66.6 bits (161), Expect(2) = 9e-11
 Identities = 33/64 (51%), Positives = 39/64 (60%), Gaps = 14/64 (21%)
 Frame = +3

Query: 207 CQYGDRCKFLHVT------QQQTKPNAFGFG--------PQNGTQFPHTNTQQQKPNPFG 344
           C+YG +C++LH +      QQQ KPN FGFG        P  G+QF     QQQKPNPFG
Sbjct: 16  CKYGAQCRYLHASPHQQQQQQQAKPNPFGFGTGSRQQQQPSFGSQFQQQQQQQQKPNPFG 75

Query: 345 FGVQ 356
           FGVQ
Sbjct: 76  FGVQ 79



 Score = 24.6 bits (52), Expect(2) = 9e-11
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = +1

Query: 94  MPPRREPCRNFQRG 135
           M  R+E CRNFQRG
Sbjct: 1   MSRRQEICRNFQRG 14


>gb|EEC81277.1| hypothetical protein OsI_24382 [Oryza sativa Indica Group]
          Length = 1267

 Score = 65.9 bits (159), Expect(2) = 1e-10
 Identities = 33/66 (50%), Positives = 39/66 (59%), Gaps = 16/66 (24%)
 Frame = +3

Query: 207 CQYGDRCKFLHVT--------QQQTKPNAFGFG--------PQNGTQFPHTNTQQQKPNP 338
           C+YG +C++LH +        QQQ KPN FGFG        P  G+QF     QQQKPNP
Sbjct: 16  CKYGAQCRYLHASPHQQQQQQQQQAKPNPFGFGTGSRQQQQPSFGSQFQQQQQQQQKPNP 75

Query: 339 FGFGVQ 356
           FGFGVQ
Sbjct: 76  FGFGVQ 81



 Score = 24.6 bits (52), Expect(2) = 1e-10
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = +1

Query: 94  MPPRREPCRNFQRG 135
           M  R+E CRNFQRG
Sbjct: 1   MSRRQEICRNFQRG 14


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