BLASTX nr result
ID: Panax21_contig00008530
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00008530 (361 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002274515.2| PREDICTED: zinc finger CCCH domain-containin... 89 4e-18 emb|CBI38961.3| unnamed protein product [Vitis vinifera] 89 5e-16 gb|EEE66321.1| hypothetical protein OsJ_22559 [Oryza sativa Japo... 67 8e-11 ref|NP_001058507.1| Os06g0704300 [Oryza sativa Japonica Group] g... 67 9e-11 gb|EEC81277.1| hypothetical protein OsI_24382 [Oryza sativa Indi... 66 1e-10 >ref|XP_002274515.2| PREDICTED: zinc finger CCCH domain-containing protein 16-like [Vitis vinifera] Length = 383 Score = 88.6 bits (218), Expect(2) = 4e-18 Identities = 38/51 (74%), Positives = 41/51 (80%) Frame = +3 Query: 207 CQYGDRCKFLHVTQQQTKPNAFGFGPQNGTQFPHTNTQQQKPNPFGFGVQS 359 CQYG+RCKFLHVTQQQ KPN GFG Q + F HTN QQQ+ NPFGFGVQS Sbjct: 16 CQYGERCKFLHVTQQQPKPNVSGFGAQTSSNFQHTNVQQQRSNPFGFGVQS 66 Score = 27.3 bits (59), Expect(2) = 4e-18 Identities = 10/14 (71%), Positives = 12/14 (85%) Frame = +1 Query: 94 MPPRREPCRNFQRG 135 M ++EPCRNFQRG Sbjct: 1 MNRKKEPCRNFQRG 14 >emb|CBI38961.3| unnamed protein product [Vitis vinifera] Length = 394 Score = 88.6 bits (218), Expect = 5e-16 Identities = 38/51 (74%), Positives = 41/51 (80%) Frame = +3 Query: 207 CQYGDRCKFLHVTQQQTKPNAFGFGPQNGTQFPHTNTQQQKPNPFGFGVQS 359 CQYG+RCKFLHVTQQQ KPN GFG Q + F HTN QQQ+ NPFGFGVQS Sbjct: 14 CQYGERCKFLHVTQQQPKPNVSGFGAQTSSNFQHTNVQQQRSNPFGFGVQS 64 >gb|EEE66321.1| hypothetical protein OsJ_22559 [Oryza sativa Japonica Group] Length = 1360 Score = 66.6 bits (161), Expect(2) = 8e-11 Identities = 33/64 (51%), Positives = 39/64 (60%), Gaps = 14/64 (21%) Frame = +3 Query: 207 CQYGDRCKFLHVT------QQQTKPNAFGFG--------PQNGTQFPHTNTQQQKPNPFG 344 C+YG +C++LH + QQQ KPN FGFG P G+QF QQQKPNPFG Sbjct: 16 CKYGAQCRYLHASPHQQQQQQQAKPNPFGFGTGSRQQQQPSFGSQFQQQQQQQQKPNPFG 75 Query: 345 FGVQ 356 FGVQ Sbjct: 76 FGVQ 79 Score = 24.6 bits (52), Expect(2) = 8e-11 Identities = 10/14 (71%), Positives = 11/14 (78%) Frame = +1 Query: 94 MPPRREPCRNFQRG 135 M R+E CRNFQRG Sbjct: 1 MSRRQEICRNFQRG 14 >ref|NP_001058507.1| Os06g0704300 [Oryza sativa Japonica Group] gi|75252808|sp|Q5Z807.1|C3H46_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 46; Short=OsC3H46 gi|53791927|dbj|BAD54049.1| zinc finger protein-like [Oryza sativa Japonica Group] gi|113596547|dbj|BAF20421.1| Os06g0704300 [Oryza sativa Japonica Group] Length = 390 Score = 66.6 bits (161), Expect(2) = 9e-11 Identities = 33/64 (51%), Positives = 39/64 (60%), Gaps = 14/64 (21%) Frame = +3 Query: 207 CQYGDRCKFLHVT------QQQTKPNAFGFG--------PQNGTQFPHTNTQQQKPNPFG 344 C+YG +C++LH + QQQ KPN FGFG P G+QF QQQKPNPFG Sbjct: 16 CKYGAQCRYLHASPHQQQQQQQAKPNPFGFGTGSRQQQQPSFGSQFQQQQQQQQKPNPFG 75 Query: 345 FGVQ 356 FGVQ Sbjct: 76 FGVQ 79 Score = 24.6 bits (52), Expect(2) = 9e-11 Identities = 10/14 (71%), Positives = 11/14 (78%) Frame = +1 Query: 94 MPPRREPCRNFQRG 135 M R+E CRNFQRG Sbjct: 1 MSRRQEICRNFQRG 14 >gb|EEC81277.1| hypothetical protein OsI_24382 [Oryza sativa Indica Group] Length = 1267 Score = 65.9 bits (159), Expect(2) = 1e-10 Identities = 33/66 (50%), Positives = 39/66 (59%), Gaps = 16/66 (24%) Frame = +3 Query: 207 CQYGDRCKFLHVT--------QQQTKPNAFGFG--------PQNGTQFPHTNTQQQKPNP 338 C+YG +C++LH + QQQ KPN FGFG P G+QF QQQKPNP Sbjct: 16 CKYGAQCRYLHASPHQQQQQQQQQAKPNPFGFGTGSRQQQQPSFGSQFQQQQQQQQKPNP 75 Query: 339 FGFGVQ 356 FGFGVQ Sbjct: 76 FGFGVQ 81 Score = 24.6 bits (52), Expect(2) = 1e-10 Identities = 10/14 (71%), Positives = 11/14 (78%) Frame = +1 Query: 94 MPPRREPCRNFQRG 135 M R+E CRNFQRG Sbjct: 1 MSRRQEICRNFQRG 14