BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008510
         (1163 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277445.2| PREDICTED: splicing factor U2af small subuni...    92   2e-16
ref|XP_004143302.1| PREDICTED: splicing factor U2af small subuni...    71   6e-10
ref|XP_004171272.1| PREDICTED: splicing factor U2af small subuni...    70   8e-10
ref|XP_002528581.1| U2 snrnp auxiliary factor, small subunit, pu...    69   2e-09
gb|AAH03883.1| CDNA sequence BC003883 [Mus musculus]                   67   9e-09

>ref|XP_002277445.2| PREDICTED: splicing factor U2af small subunit B-like [Vitis
           vinifera]
          Length = 343

 Score = 92.4 bits (228), Expect = 2e-16
 Identities = 46/85 (54%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
 Frame = +2

Query: 2   GGRSRSPGGKRNRSPVREGSAERRAKIEQWNREKEQAESXXXXXXXXXXXXXXXXXXXXX 181
           GGRSRSPGG+RN+SPVREGSAERRAKIEQWNRE+EQAE+                     
Sbjct: 259 GGRSRSPGGRRNKSPVREGSAERRAKIEQWNREREQAEATNKNDNSHSDNGNNNNDFEQD 318

Query: 182 EEQYYDDPHQQ--QEHLPDDGGYNY 250
           ++QYY+  HQ+  Q+     GGYNY
Sbjct: 319 DQQYYNPQHQEEDQQQQQQHGGYNY 343


>ref|XP_004143302.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
           sativus]
          Length = 317

 Score = 70.9 bits (172), Expect = 6e-10
 Identities = 31/39 (79%), Positives = 37/39 (94%)
 Frame = +2

Query: 2   GGRSRSPGGKRNRSPVREGSAERRAKIEQWNREKEQAES 118
           GGRSRSPGG+RNRSPVRE SAERRAKIEQWNR++E+ ++
Sbjct: 250 GGRSRSPGGRRNRSPVRESSAERRAKIEQWNRDREKEDN 288


>ref|XP_004171272.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
           sativus]
          Length = 317

 Score = 70.5 bits (171), Expect = 8e-10
 Identities = 31/39 (79%), Positives = 37/39 (94%)
 Frame = +2

Query: 2   GGRSRSPGGKRNRSPVREGSAERRAKIEQWNREKEQAES 118
           GGRSRSPGG+RNRSPVRE SAERRAKIEQWNR++E+ ++
Sbjct: 250 GGRSRSPGGRRNRSPVRESSAERRAKIEQWNRDREKDDN 288


>ref|XP_002528581.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
           communis] gi|223531977|gb|EEF33789.1| U2 snrnp auxiliary
           factor, small subunit, putative [Ricinus communis]
          Length = 313

 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 34/40 (85%), Positives = 36/40 (90%), Gaps = 1/40 (2%)
 Frame = +2

Query: 2   GGRSRSPGGKRNRSP-VREGSAERRAKIEQWNREKEQAES 118
           GGRSRSP G+RNRSP VRE SAERRAKIEQWNRE+EQ ES
Sbjct: 244 GGRSRSPAGRRNRSPPVRESSAERRAKIEQWNREREQTES 283


>gb|AAH03883.1| CDNA sequence BC003883 [Mus musculus]
          Length = 310

 Score = 67.0 bits (162), Expect = 9e-09
 Identities = 36/69 (52%), Positives = 41/69 (59%)
 Frame = +2

Query: 5   GRSRSPGGKRNRSPVREGSAERRAKIEQWNREKEQAESXXXXXXXXXXXXXXXXXXXXXE 184
           GRSRSP G+R+RSPVRE S ERRAKI QWNREKEQA++                     E
Sbjct: 243 GRSRSPPGRRDRSPVRENSEERRAKIAQWNREKEQADTGNNDVNHDVTDNHANGFQDNGE 302

Query: 185 EQYYDDPHQ 211
           + YYD P Q
Sbjct: 303 D-YYDHPQQ 310