BLASTX nr result

ID: Panax21_contig00008506 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008506
         (841 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526938.1| hypothetical protein RCOM_0530890 [Ricinus c...   163   4e-38
ref|XP_002268221.1| PREDICTED: uncharacterized protein LOC100256...   145   8e-33
gb|ADC68622.1| hypothetical protein [Solanum lycopersicum] gi|36...   145   1e-32
emb|CBI17701.3| unnamed protein product [Vitis vinifera]              144   2e-32
ref|XP_002300083.1| predicted protein [Populus trichocarpa] gi|2...   130   5e-28

>ref|XP_002526938.1| hypothetical protein RCOM_0530890 [Ricinus communis]
           gi|223533690|gb|EEF35425.1| hypothetical protein
           RCOM_0530890 [Ricinus communis]
          Length = 180

 Score =  163 bits (413), Expect = 4e-38
 Identities = 78/103 (75%), Positives = 89/103 (86%), Gaps = 4/103 (3%)
 Frame = +3

Query: 87  MKREGRQHGMVRTCRILPTEFNPR----FINRFESPPTAGLFTKVSTKPTNHSKFTGKCV 254
           MKREGRQHGMVRTCRILP+ +NPR    FINRF+SPPTAGLFTKV  +PTNHSKFTGKC 
Sbjct: 1   MKREGRQHGMVRTCRILPSPWNPRPDSRFINRFDSPPTAGLFTKVLPRPTNHSKFTGKCG 60

Query: 255 RPRCSDCHLHPACKSKDKAKGTQKLRSSSDVNSDCRLVSWRVV 383
           +PRC+ CH+HP+CKSKDK KGTQKL+ S DV S+ RL+SWRVV
Sbjct: 61  KPRCNGCHMHPSCKSKDKTKGTQKLK-SHDVLSNYRLMSWRVV 102


>ref|XP_002268221.1| PREDICTED: uncharacterized protein LOC100256024 [Vitis vinifera]
          Length = 218

 Score =  145 bits (367), Expect = 8e-33
 Identities = 70/103 (67%), Positives = 84/103 (81%), Gaps = 4/103 (3%)
 Frame = +3

Query: 87  MKREGRQHGMVRTCRILPTEFNP----RFINRFESPPTAGLFTKVSTKPTNHSKFTGKCV 254
           MKREGRQHGMVR+ RILP  +NP    RF+NRF+SPPTAG+FTKVS+KPTNHSKFTG C 
Sbjct: 1   MKREGRQHGMVRSYRILPPPWNPNSQERFVNRFDSPPTAGVFTKVSSKPTNHSKFTGACC 60

Query: 255 RPRCSDCHLHPACKSKDKAKGTQKLRSSSDVNSDCRLVSWRVV 383
           R +C DCHL PACKSK K KGTQK++   D+ S+ RL++WR+V
Sbjct: 61  RTKCLDCHLLPACKSKGKTKGTQKMK-PRDMVSNHRLITWRLV 102


>gb|ADC68622.1| hypothetical protein [Solanum lycopersicum]
           gi|365222884|gb|AEW69794.1| Hop-interacting protein
           THI031 [Solanum lycopersicum]
          Length = 191

 Score =  145 bits (365), Expect = 1e-32
 Identities = 76/129 (58%), Positives = 90/129 (69%), Gaps = 4/129 (3%)
 Frame = +3

Query: 87  MKREGRQHGMVRTCRILPTEFNPR----FINRFESPPTAGLFTKVSTKPTNHSKFTGKCV 254
           M+REGRQHGMVRT  ILP+ +NPR    ++N+  SPPTAGLF KV TKP+NHSKFTGKC 
Sbjct: 1   MRREGRQHGMVRTYPILPSPWNPRPEPRYMNKSNSPPTAGLFAKVPTKPSNHSKFTGKCG 60

Query: 255 RPRCSDCHLHPACKSKDKAKGTQKLRSSSDVNSDCRLVSWRVVVDXXXXXXXXXXXXXXA 434
           RPRC+ CH+HPA KSKDK KGTQKL+   DV S   LV+WRVV                A
Sbjct: 61  RPRCTSCHVHPAAKSKDKTKGTQKLKGCGDVVS---LVTWRVV----DARPGFNFSGFSA 113

Query: 435 TGILDNYNT 461
           TGILD+ ++
Sbjct: 114 TGILDHLDS 122


>emb|CBI17701.3| unnamed protein product [Vitis vinifera]
          Length = 127

 Score =  144 bits (364), Expect = 2e-32
 Identities = 69/103 (66%), Positives = 84/103 (81%), Gaps = 4/103 (3%)
 Frame = +3

Query: 87  MKREGRQHGMVRTCRILPTEFNP----RFINRFESPPTAGLFTKVSTKPTNHSKFTGKCV 254
           MKREGRQHGMVR+ RILP  +NP    RF+NRF+SPPTAG+FTKVS+KPTNHSKFTG C 
Sbjct: 1   MKREGRQHGMVRSYRILPPPWNPNSQERFVNRFDSPPTAGVFTKVSSKPTNHSKFTGACC 60

Query: 255 RPRCSDCHLHPACKSKDKAKGTQKLRSSSDVNSDCRLVSWRVV 383
           R +C DCHL PACKSK K KGTQK++   D+ S+ RL++WR++
Sbjct: 61  RTKCLDCHLLPACKSKGKTKGTQKMK-PRDMVSNHRLITWRLM 102


>ref|XP_002300083.1| predicted protein [Populus trichocarpa] gi|222847341|gb|EEE84888.1|
           predicted protein [Populus trichocarpa]
          Length = 197

 Score =  130 bits (326), Expect = 5e-28
 Identities = 77/189 (40%), Positives = 105/189 (55%), Gaps = 16/189 (8%)
 Frame = +3

Query: 87  MKREGRQHGMVRTCRILPTEFNP-----RFINRFESPPTAGLFTKVSTKPTNHSKFTGKC 251
           M+REGR HGMVR   +LP  +NP     R  N+F++P TAGLFTKVS+KPTNHSKFTGKC
Sbjct: 1   MRREGRPHGMVRAYAVLPPPWNPKPGGDRKFNKFDTPTTAGLFTKVSSKPTNHSKFTGKC 60

Query: 252 VRPRCSDCHLHPACKSKDKAKGTQKLRSSSDV-NSDCRLVSWRVVVDXXXXXXXXXXXXX 428
            +PRC +CHL P CK+K K KG+ K++S   + NS+ + ++WRVV               
Sbjct: 61  GKPRCLECHLQPCCKAKHKTKGSHKVKSQDVLSNSNAQFIAWRVV----NGRHGSNLSGF 116

Query: 429 XATGILDNYNTPXXXXXXXXXXXS------EVFDDFNET----GIELGAVEIEXXXXXXX 578
            ATG+L++  +            S      E  DD +E     G+ +  +E E       
Sbjct: 117 SATGMLNHLASTGDHDHADEVDDSGHENDQEFVDDDDENYIGDGVNIKNIEEEDG----- 171

Query: 579 XVMSFCDLG 605
             MS+CD+G
Sbjct: 172 --MSYCDVG 178


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